CircNet

General Information

circRNA Basic Information

CircID	chr2:113723104\|113746339
Strand	-
CircType	exon
Host Gene	ENSG00000115084.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	TTTGCAGATGCTGAAGGTTACTTTGCTGCTTGCACAACAGATACAACTATGAATAGTTCTTTGGGGCTGCTTTCTTACCTCATCATTGATAGGCACACTTGCACTAAGCCTTACAATACCTCTGTCCATAATAGCTGACATGTGTATGCAAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:113723104\|113746339
ORF Type	ORF1
Protein Length	47
Nucleotide Length	141
Protein Sequence	MSAIMDRGIVRLSASVPINDEVRKQPQRTIHSCICCASSKVTFSICK
Nucleotide Sequence	ATGTCAGCTATTATGGACAGAGGTATTGTAAGGCTTAGTGCAAGTGTGCCTATCAATGATGAGGTAAGAAAGCAGCCCCAAAGAACTATTCATAGTTGTATCTGTTGTGCAAGCAGCAAAGTAACCTTCAGCATCTGCAAA

CircID	chr2:113723104\|113746339
ORF Type	ORF2
Protein Length	30
Nucleotide Length	90
Protein Sequence	MNSSLGLLSYLIIDRHTCTKPYNTSVHNS*
Nucleotide Sequence	ATGAATAGTTCTTTGGGGCTGCTTTCTTACCTCATCATTGATAGGCACACTTGCACTAAGCCTTACAATACCTCTGTCCATAATAGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr2:113723104\|113746339	ELAVL1	1	3	0
chr2:113723104\|113746339	NUMA1	0	1	0
chr2:113723104\|113746339	SF3B4	1	0	0
chr2:113723104\|113746339	PRPF8	0	1	0
chr2:113723104\|113746339	UPF1	1	0	0
chr2:113723104\|113746339	TAF15	0	3	0
chr2:113723104\|113746339	FUS	0	2	0
chr2:113723104\|113746339	SRSF7	0	3	0
chr2:113723104\|113746339	SRSF1	2	2	0
chr2:113723104\|113746339	NOP58	1	1	1
chr2:113723104\|113746339	SRSF3	1	0	0
chr2:113723104\|113746339	U2AF1	1	5	2
chr2:113723104\|113746339	ADAR	0	1	0
chr2:113723104\|113746339	U2AF2	9	27	4
chr2:113723104\|113746339	DDX54	0	0	2
chr2:113723104\|113746339	RBM10	1	0	0
chr2:113723104\|113746339	PCBP2	1	0	0
chr2:113723104\|113746339	HNRNPA2B1	0	1	0
chr2:113723104\|113746339	RBM22	0	3	0
chr2:113723104\|113746339	PTBP1	0	0	1
chr2:113723104\|113746339	HNRNPC	3	0	0
chr2:113723104\|113746339	SMNDC1	1	0	2
chr2:113723104\|113746339	ACIN1	3	2	3
chr2:113723104\|113746339	LIN28B	3	0	4
chr2:113723104\|113746339	SND1	0	0	1
chr2:113723104\|113746339	IGF2BP1	0	0	1
chr2:113723104\|113746339	IGF2BP3	0	0	1
chr2:113723104\|113746339	IGF2BP2	0	4	1
chr2:113723104\|113746339	TARDBP	0	8	0
chr2:113723104\|113746339	BUD13	1	0	3
chr2:113723104\|113746339	RBM47	0	0	1
chr2:113723104\|113746339	EIF4G2	0	1	0
chr2:113723104\|113746339	CSTF2T	0	1	1
chr2:113723104\|113746339	RBM27	1	0	0
chr2:113723104\|113746339	RNF219	0	0	1
chr2:113723104\|113746339	TIAL1	0	1	0
chr2:113723104\|113746339	EWSR1	0	1	0
chr2:113723104\|113746339	EIF4A3	0	4	2
chr2:113723104\|113746339	AGO2	0	0	6

CircRNA Information