CircRNA Information

General Information
circRNA Basic Information
CircID chr2:120350351|120350565
Strand +
CircType exon
Host Gene ENSG00000163083.5;
Algorism CIRI2;
Sequence AGTCAAACGGTCATTGCCCCTGCTCCCAGGTCTCTGACGGGTTGTGTCCTTTCTGGGTCTCTTTCCCTCGACAAGGGCATGGAAGGACAGGCTCCCCAGGCCTTGAAGCACGAAGGATCCCAGGCTGGGGAAGAAGCAGACATCGAGCCAGGCAGAGCAGGCCTGGTAAAAGCCACGGGGCACACGCAGCCTCCGCCGAGCTGCGCTCCCCACCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:120350351|120350565 hsa-miR-149-5p 0 0 1
chr2:120350351|120350565 hsa-miR-149-3p 0 0 1
chr2:120350351|120350565 hsa-miR-346 -11 0 1
chr2:120350351|120350565 hsa-miR-517-5p 0 0 1
chr2:120350351|120350565 hsa-miR-517a-3p 0 0 1
chr2:120350351|120350565 hsa-miR-517c-3p 0 0 1
chr2:120350351|120350565 hsa-miR-604 -5 0 1
chr2:120350351|120350565 hsa-miR-631 -7 0 1
chr2:120350351|120350565 hsa-miR-632 -6 1 1
chr2:120350351|120350565 hsa-miR-638 -16 0 1
chr2:120350351|120350565 hsa-miR-661 -17 1 1
chr2:120350351|120350565 hsa-miR-658 -10 0 1
chr2:120350351|120350565 hsa-miR-920 -11 0 1
chr2:120350351|120350565 hsa-miR-938 -14 0 1
chr2:120350351|120350565 hsa-miR-939-5p 0 0 1
chr2:120350351|120350565 hsa-miR-939-3p 0 0 1
chr2:120350351|120350565 hsa-miR-1307-5p 0 0 1
chr2:120350351|120350565 hsa-miR-1307-3p 0 0 1
chr2:120350351|120350565 hsa-miR-1197 -1 0 1
chr2:120350351|120350565 hsa-miR-769-5p -10 0 1
chr2:120350351|120350565 hsa-miR-491-5p -2 1 1
chr2:120350351|120350565 hsa-miR-485-5p -5 0 1
chr2:120350351|120350565 hsa-miR-654-3p -3 1 1
chr2:120350351|120350565 hsa-miR-769-3p -14 0 1
chr2:120350351|120350565 hsa-miR-450b-3p -6 1 1
chr2:120350351|120350565 hsa-miR-1254 0 0 1
chr2:120350351|120350565 hsa-miR-711 -11 1 0
chr2:120350351|120350565 hsa-miR-3153 -9 1 0
chr2:120350351|120350565 hsa-miR-3661 -13 1 0
chr2:120350351|120350565 hsa-miR-4660 -7 1 0
chr2:120350351|120350565 hsa-miR-6090 -21 1 0
chr2:120350351|120350565 hsa-miR-8080 -7 1 0
chr2:120350351|120350565 hsa-miR-103a-2-5p -8 1 0
chr2:120350351|120350565 hsa-miR-132-5p -3 1 0
chr2:120350351|120350565 hsa-miR-214-5p -9 1 0
chr2:120350351|120350565 hsa-miR-3194-3p -14 1 0
chr2:120350351|120350565 hsa-miR-3150a-3p -7 1 0
chr2:120350351|120350565 hsa-miR-7851-3p -14 1 0
chr2:120350351|120350565 hsa-miR-3192-5p -14 1 0
chr2:120350351|120350565 hsa-miR-6875-3p -11 1 0
chr2:120350351|120350565 hsa-miR-6849-3p -9 1 0
chr2:120350351|120350565 hsa-miR-6852-5p -11 1 0
chr2:120350351|120350565 hsa-miR-6514-3p -11 1 0
chr2:120350351|120350565 hsa-miR-5584-5p -5 1 0
chr2:120350351|120350565 hsa-miR-3922-5p -8 1 0
chr2:120350351|120350565 hsa-miR-4778-3p -5 1 0
chr2:120350351|120350565 hsa-miR-6872-3p -8 1 0
chr2:120350351|120350565 hsa-miR-6748-3p -8 1 0
chr2:120350351|120350565 hsa-miR-4520-5p -4 1 0
chr2:120350351|120350565 hsa-miR-4650-5p -3 1 0
chr2:120350351|120350565 hsa-miR-1343-5p -12 1 0
chr2:120350351|120350565 hsa-miR-6743-5p -18 1 0
chr2:120350351|120350565 hsa-miR-6756-5p 0 1 0
chr2:120350351|120350565 hsa-miR-6763-5p -7 1 0
chr2:120350351|120350565 hsa-miR-6797-5p -17 1 0
chr2:120350351|120350565 hsa-miR-6739-5p -7 1 0
chr2:120350351|120350565 hsa-miR-6876-5p -7 1 0
chr2:120350351|120350565 hsa-miR-6766-5p 0 1 0
chr2:120350351|120350565 hsa-miR-4667-5p -16 1 0
chr2:120350351|120350565 hsa-miR-6753-3p -12 1 0
chr2:120350351|120350565 hsa-miR-103a-1-5p -7 1 0
chr2:120350351|120350565 hsa-miR-5699-3p -13 1 0
chr2:120350351|120350565 hsa-miR-6733-5p -8 1 0
chr2:120350351|120350565 hsa-miR-1912-3p -2 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr2:120350351|120350565
ORF Type ORF1
Protein Length 60
Nucleotide Length 180
Protein Sequence MTGCVLSGSLSLDKGMEGQAPQALKHEGSQAGEEADIEPGRAGLVKATGHTQPPPSCAPH
Nucleotide Sequence CTGACGGGTTGTGTCCTTTCTGGGTCTCTTTCCCTCGACAAGGGCATGGAAGGACAGGCTCCCCAGGCCTTGAAGCACGAAGGATCCCAGGCTGGGGAAGAAGCAGACATCGAGCCAGGCAGAGCAGGCCTGGTAAAAGCCACGGGGCACACGCAGCCTCCGCCGAGCTGCGCTCCCCAC

CircID chr2:120350351|120350565
ORF Type ORF2
Protein Length 58
Nucleotide Length 174
Protein Sequence MCPFWVSFPRQGHGRTGSPGLEARRIPGWGRSRHRARQSRPGKSHGAHAASAELRSPP
Nucleotide Sequence TTGTGTCCTTTCTGGGTCTCTTTCCCTCGACAAGGGCATGGAAGGACAGGCTCCCCAGGCCTTGAAGCACGAAGGATCCCAGGCTGGGGAAGAAGCAGACATCGAGCCAGGCAGAGCAGGCCTGGTAAAAGCCACGGGGCACACGCAGCCTCCGCCGAGCTGCGCTCCCCACCC

CircID chr2:120350351|120350565
ORF Type ORF3
Protein Length 50
Nucleotide Length 153
Protein Sequence MPGSMSASSPAWDPSCFKAWGACPSMPLSRERDPERTQPVRDLGAGAMTV
Nucleotide Sequence CTGCCTGGCTCGATGTCTGCTTCTTCCCCAGCCTGGGATCCTTCGTGCTTCAAGGCCTGGGGAGCCTGTCCTTCCATGCCCTTGTCGAGGGAAAGAGACCCAGAAAGGACACAACCCGTCAGAGACCTGGGAGCAGGGGCAATGACCGTTTGA

CircID chr2:120350351|120350565
ORF Type ORF4
Protein Length 49
Nucleotide Length 150
Protein Sequence MLCLARCLLLPQPGILRASRPGEPVLPCPCRGKETQKGHNPSETWEQGQ
Nucleotide Sequence CTGCTCTGCCTGGCTCGATGTCTGCTTCTTCCCCAGCCTGGGATCCTTCGTGCTTCAAGGCCTGGGGAGCCTGTCCTTCCATGCCCTTGTCGAGGGAAAGAGACCCAGAAAGGACACAACCCGTCAGAGACCTGGGAGCAGGGGCAATGA

CircID chr2:120350351|120350565
ORF Type ORF5
Protein Length 63
Nucleotide Length 189
Protein Sequence MRVPRGFYQACSAWLDVCFFPSLGSFVLQGLGSLSFHALVEGKRPRKDTTRQRPGSRGNDRLT
Nucleotide Sequence CTGCGTGTGCCCCGTGGCTTTTACCAGGCCTGCTCTGCCTGGCTCGATGTCTGCTTCTTCCCCAGCCTGGGATCCTTCGTGCTTCAAGGCCTGGGGAGCCTGTCCTTCCATGCCCTTGTCGAGGGAAAGAGACCCAGAAAGGACACAACCCGTCAGAGACCTGGGAGCAGGGGCAATGACCGTTTGACT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites