CircRNA Information

General Information
circRNA Basic Information
CircID chr2:121219105|121219232
Strand -
CircType exon
Host Gene ENSG00000115112.7;
Algorism CIRI2;
Sequence CCGCTCTAGAGACCTTGCCCTGCTCTGGGGGCCTTGCCCAGTGCCACTTACACTGTCTAGAAAAGCTAAGGCCACCAGCTTCATCCACTCTCCAGGAGGTCACACAAGATCAAAAGAGGATCATCGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:121219105|121219232 hsa-miR-185-5p 0 0 1
chr2:121219105|121219232 hsa-miR-185-3p 0 0 1
chr2:121219105|121219232 hsa-miR-581 0 0 1
chr2:121219105|121219232 hsa-miR-612 1 1 1
chr2:121219105|121219232 hsa-miR-1251-5p 0 0 1
chr2:121219105|121219232 hsa-miR-1251-3p 0 0 1
chr2:121219105|121219232 hsa-miR-1255a 0 0 1
chr2:121219105|121219232 hsa-miR-127-5p 0 0 1
chr2:121219105|121219232 hsa-miR-361-3p 0 0 1
chr2:121219105|121219232 hsa-miR-518d-5p 0 0 1
chr2:121219105|121219232 hsa-miR-519b-5p 0 0 1
chr2:121219105|121219232 hsa-miR-519c-5p 0 0 1
chr2:121219105|121219232 hsa-miR-520c-5p 0 0 1
chr2:121219105|121219232 hsa-miR-1255b 0 0 1
chr2:121219105|121219232 hsa-miR-138 0 0 1
chr2:121219105|121219232 hsa-miR-1285 0 0 1
chr2:121219105|121219232 hsa-miR-526a 0 0 1
chr2:121219105|121219232 hsa-miR-1826 0 0 1
chr2:121219105|121219232 hsa-miR-147 0 0 1
chr2:121219105|121219232 hsa-miR-644a 1 0 0
chr2:121219105|121219232 hsa-miR-3138 1 0 0
chr2:121219105|121219232 hsa-miR-4456 0 1 0
chr2:121219105|121219232 hsa-miR-4481 1 0 0
chr2:121219105|121219232 hsa-miR-4486 1 0 0
chr2:121219105|121219232 hsa-miR-4501 1 0 0
chr2:121219105|121219232 hsa-miR-4739 1 0 0
chr2:121219105|121219232 hsa-miR-5090 1 0 0
chr2:121219105|121219232 hsa-miR-5192 1 1 0
chr2:121219105|121219232 hsa-miR-6132 1 0 0
chr2:121219105|121219232 hsa-miR-6860 0 1 0
chr2:121219105|121219232 hsa-miR-8089 1 0 0
chr2:121219105|121219232 hsa-miR-12115 1 0 0
chr2:121219105|121219232 hsa-miR-370-3p 1 0 0
chr2:121219105|121219232 hsa-miR-6809-5p 0 1 0
chr2:121219105|121219232 hsa-miR-6765-5p 1 0 0
chr2:121219105|121219232 hsa-miR-6894-5p 1 0 0
chr2:121219105|121219232 hsa-miR-6089 1 0 0
chr2:121219105|121219232 hsa-miR-6744-5p 1 0 0
chr2:121219105|121219232 hsa-miR-6727-5p 1 0 0
chr2:121219105|121219232 hsa-miR-7108-5p 1 0 0
chr2:121219105|121219232 hsa-miR-5008-5p 1 0 0
chr2:121219105|121219232 hsa-miR-6753-5p 1 0 0
chr2:121219105|121219232 hsa-miR-4690-5p 1 0 0
chr2:121219105|121219232 hsa-miR-4732-5p 1 0 0
chr2:121219105|121219232 hsa-miR-423-5p 1 0 0
chr2:121219105|121219232 hsa-miR-4707-5p 1 0 0
chr2:121219105|121219232 hsa-miR-3681-5p 0 1 0
chr2:121219105|121219232 hsa-miR-660-3p 0 1 0
chr2:121219105|121219232 hsa-miR-744-5p 1 0 0
chr2:121219105|121219232 hsa-miR-598-5p 1 0 0
chr2:121219105|121219232 hsa-miR-6501-3p 0 1 0
chr2:121219105|121219232 hsa-miR-1207-5p 1 0 0
chr2:121219105|121219232 hsa-miR-4763-3p 1 0 0
chr2:121219105|121219232 hsa-miR-6775-5p 1 0 0
chr2:121219105|121219232 hsa-miR-6726-5p 1 0 0
chr2:121219105|121219232 hsa-miR-1249-5p 1 0 0
chr2:121219105|121219232 hsa-miR-6722-3p 1 0 0
chr2:121219105|121219232 hsa-miR-6763-5p 1 1 0
chr2:121219105|121219232 hsa-miR-6879-5p 1 1 0
chr2:121219105|121219232 hsa-miR-5189-5p 0 1 0
chr2:121219105|121219232 hsa-miR-6780b-5p 1 0 0
chr2:121219105|121219232 hsa-miR-6836-5p 1 1 0
chr2:121219105|121219232 hsa-miR-10396a-5p 1 0 0
chr2:121219105|121219232 hsa-miR-1909-3p 1 0 0
chr2:121219105|121219232 hsa-miR-328-5p 1 0 0
chr2:121219105|121219232 hsa-miR-4632-5p 1 0 0
chr2:121219105|121219232 hsa-miR-4685-5p 1 1 0
chr2:121219105|121219232 hsa-miR-6729-5p 0 1 0
chr2:121219105|121219232 hsa-miR-6735-5p 1 0 0
chr2:121219105|121219232 hsa-miR-6777-5p 1 0 0
chr2:121219105|121219232 hsa-miR-4758-5p 0 1 0
chr2:121219105|121219232 hsa-miR-10398-3p 1 0 0
chr2:121219105|121219232 hsa-miR-769-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:121219105|121219232
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MLWGPCPVPLTLSRKAKATSFIHSPGGHTRSKEDHR
Nucleotide Sequence CTGCTCTGGGGGCCTTGCCCAGTGCCACTTACACTGTCTAGAAAAGCTAAGGCCACCAGCTTCATCCACTCTCCAGGAGGTCACACAAGATCAAAAGAGGATCATCGA
CircID chr2:121219105|121219232
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MPCSGGLAQCHLHCLEKLRPPASSTLQEVTQDQKRIIE
Nucleotide Sequence TTGCCCTGCTCTGGGGGCCTTGCCCAGTGCCACTTACACTGTCTAGAAAAGCTAAGGCCACCAGCTTCATCCACTCTCCAGGAGGTCACACAAGATCAAAAGAGGATCATCGAG
CircID chr2:121219105|121219232
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MKLVALAFLDSVSGTGQGPQSRARSLER
Nucleotide Sequence ATGAAGCTGGTGGCCTTAGCTTTTCTAGACAGTGTAAGTGGCACTGGGCAAGGCCCCCAGAGCAGGGCAAGGTCTCTAGAGCGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab