CircRNA Information

General Information
circRNA Basic Information
CircID chr2:127720140|127720271
Strand +
CircType exon
Host Gene ENSG00000136709.10;
Algorism CIRI2;
Sequence CCCAGCCTTTTCCAGGACAAGGTCCAATGTCTCAGATTCCTCAAGGTTTTCAACAGCCCCATCCATCTCAGCAGATGCCAATGAACATGGCTCAAATGGGGCCTCCAGGTCCACAGGGACAGTTTAGGCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:127720140|127720271 hsa-miR-143-5p 0 0 1
chr2:127720140|127720271 hsa-miR-143-3p 0 0 1
chr2:127720140|127720271 hsa-miR-492 0 1 1
chr2:127720140|127720271 hsa-miR-570-5p 0 0 1
chr2:127720140|127720271 hsa-miR-570-3p 0 0 1
chr2:127720140|127720271 hsa-miR-619-5p 0 0 1
chr2:127720140|127720271 hsa-miR-619-3p 0 0 1
chr2:127720140|127720271 hsa-miR-631 0 1 1
chr2:127720140|127720271 hsa-miR-650 0 0 1
chr2:127720140|127720271 hsa-miR-653-5p 0 0 1
chr2:127720140|127720271 hsa-miR-653-3p 0 0 1
chr2:127720140|127720271 hsa-miR-1206 0 0 1
chr2:127720140|127720271 hsa-miR-548g-5p 0 0 1
chr2:127720140|127720271 hsa-miR-548g-3p 0 0 1
chr2:127720140|127720271 hsa-miR-1267 0 0 1
chr2:127720140|127720271 hsa-miR-1224-5p 0 0 1
chr2:127720140|127720271 hsa-miR-339-5p 0 0 1
chr2:127720140|127720271 hsa-miR-875-3p 0 0 1
chr2:127720140|127720271 hsa-miR-1274a 0 0 1
chr2:127720140|127720271 hsa-miR-1274b 0 0 1
chr2:127720140|127720271 hsa-miR-608 1 0 0
chr2:127720140|127720271 hsa-miR-762 1 0 0
chr2:127720140|127720271 hsa-miR-3170 1 0 0
chr2:127720140|127720271 hsa-miR-4298 1 0 0
chr2:127720140|127720271 hsa-miR-3911 0 1 0
chr2:127720140|127720271 hsa-miR-4506 1 0 0
chr2:127720140|127720271 hsa-miR-2392 1 0 0
chr2:127720140|127720271 hsa-miR-4507 1 0 0
chr2:127720140|127720271 hsa-miR-4535 1 1 0
chr2:127720140|127720271 hsa-miR-4642 0 1 0
chr2:127720140|127720271 hsa-miR-4654 1 0 0
chr2:127720140|127720271 hsa-miR-4656 1 0 0
chr2:127720140|127720271 hsa-miR-4686 0 1 0
chr2:127720140|127720271 hsa-miR-4741 1 0 0
chr2:127720140|127720271 hsa-miR-6085 1 0 0
chr2:127720140|127720271 hsa-miR-6124 0 1 0
chr2:127720140|127720271 hsa-miR-8052 1 0 0
chr2:127720140|127720271 hsa-miR-8055 0 1 0
chr2:127720140|127720271 hsa-miR-8077 1 0 0
chr2:127720140|127720271 hsa-miR-9718 1 0 0
chr2:127720140|127720271 hsa-miR-128-1-5p 1 0 0
chr2:127720140|127720271 hsa-miR-4687-3p 0 1 0
chr2:127720140|127720271 hsa-miR-7114-5p 0 1 0
chr2:127720140|127720271 hsa-miR-6807-5p 0 1 0
chr2:127720140|127720271 hsa-miR-7160-5p 1 0 0
chr2:127720140|127720271 hsa-miR-3189-5p 0 1 0
chr2:127720140|127720271 hsa-miR-185-3p 1 0 0
chr2:127720140|127720271 hsa-miR-6829-5p 1 0 0
chr2:127720140|127720271 hsa-miR-2467-5p 0 1 0
chr2:127720140|127720271 hsa-miR-6782-5p 1 0 0
chr2:127720140|127720271 hsa-miR-5008-5p 0 1 0
chr2:127720140|127720271 hsa-miR-1229-5p 1 0 0
chr2:127720140|127720271 hsa-miR-6834-5p 1 0 0
chr2:127720140|127720271 hsa-miR-659-5p 0 1 0
chr2:127720140|127720271 hsa-miR-149-3p 1 0 0
chr2:127720140|127720271 hsa-miR-937-5p 1 0 0
chr2:127720140|127720271 hsa-miR-146b-3p 0 1 0
chr2:127720140|127720271 hsa-miR-4776-5p 1 0 0
chr2:127720140|127720271 hsa-miR-490-3p 0 1 0
chr2:127720140|127720271 hsa-miR-6853-3p 0 1 0
chr2:127720140|127720271 hsa-miR-3675-5p 0 1 0
chr2:127720140|127720271 hsa-miR-6752-5p 1 0 0
chr2:127720140|127720271 hsa-miR-6756-5p 1 0 0
chr2:127720140|127720271 hsa-miR-6803-5p 1 0 0
chr2:127720140|127720271 hsa-miR-6851-5p 1 0 0
chr2:127720140|127720271 hsa-miR-7110-5p 1 0 0
chr2:127720140|127720271 hsa-miR-6779-5p 1 0 0
chr2:127720140|127720271 hsa-miR-3620-5p 1 0 0
chr2:127720140|127720271 hsa-miR-6846-5p 1 0 0
chr2:127720140|127720271 hsa-miR-6848-5p 1 0 0
chr2:127720140|127720271 hsa-miR-6858-5p 1 0 0
chr2:127720140|127720271 hsa-miR-6855-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:127720140|127720271
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence MSQIPQGFQQPHPSQQMPMNMAQMGPPGPQGQFRP
Nucleotide Sequence ATGTCTCAGATTCCTCAAGGTTTTCAACAGCCCCATCCATCTCAGCAGATGCCAATGAACATGGCTCAAATGGGGCCTCCAGGTCCACAGGGACAGTTTAGGCCT
CircID chr2:127720140|127720271
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MEAPFEPCSLASAEMDGAVENLEESETLDLVLEKAG
Nucleotide Sequence CTGGAGGCCCCATTTGAGCCATGTTCATTGGCATCTGCTGAGATGGATGGGGCTGTTGAAAACCTTGAGGAATCTGAGACATTGGACCTTGTCCTGGAAAAGGCTGGG
CircID chr2:127720140|127720271
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MSLWTWRPHLSHVHWHLLRWMGLLKTLRNLRHWTLSWKRL
Nucleotide Sequence CTGTCCCTGTGGACCTGGAGGCCCCATTTGAGCCATGTTCATTGGCATCTGCTGAGATGGATGGGGCTGTTGAAAACCTTGAGGAATCTGAGACATTGGACCTTGTCCTGGAAAAGGCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab