CircNet

General Information

circRNA Basic Information

CircID	chr2:128107938\|128138852
Strand	+
CircType	exon
Host Gene	ENSG00000136731.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTACCGATTATTCCTACTATCATGCAATATTGGAGGCTGCATTTCAGTTTCTGTCACCCCTCCAGCAGAATTTGTTTAAATTTTGTCTGTCCCTTCGTTCTTACTCAGCTACAATCCAAGCCTTCCAGCAGATAGCAGCTGATGAACCTCCACCAGAAGGATGTAATTCGTTTTTTTCAGTGCATGGAAAGAAGACTTGTGAATCTGATACCCTTGAGGCTCTTCTACTGACAGCCTCTGAAAGACCCAAACCTTTATTGTTCAAAGGAGATCACAGATATCCCTCGTCTAATCCTGAAAGCCCTGTGGTGATTTTCTACTCTGAGATTGGCTCTGAGGAATTTTCCAATTTTCACCGCCAGCTTATATCAAAAAGCAATGCAGGCAAAATCAATTATGTATTCAGACATTATATATTTAATCCCAGGAAGGAGCCTGTTTACCTCTCTGGCTATGGCGTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACTCAGGTGAAAGGAACTGAGGTAAACACCACAGTGATTGGTGAAAATGATCCTATTGATGAGGTTCAGGGGTTCCTCTTTGGAAAATTAAGAGATCTGCACCCCGACCTGGAGGGACAGTTGAAAGAACTCAGAAAGCATCTTGTAGAGAGCACCAATGAAATGGCACCTTTAAAGGTTTGGCAGTTGCAAGATCTCAGTTTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTTGGTTGTCATGAAGGATCTTAGTCAGAATTTTCCTACCAAAGCCAGAGCAATAACAAAAACAGCTGTGAGCTCAGAACTTAGAACCGAAGTGGAAGAGAATCAGAAGTATTTCAAGGGAACTTTAGGATTACAACCTGGAGATTCAGCCCTCTTCATCAATGGACTTCACATGGATTTAGATACACAGGATATATTCAGTCTGTTTGATGTGTTGAGGAATGAAGCTCGGGTAATGGAGGGTCTGCATAGATTGGGAATAGAAGGCCTTTCTCTGCATAATGTTTTGAAGCTGAACATCCAGCCCTCTGAGGCAGACTATGCCGTAGACATCCGGAGTCCTGCTATTTCATGGGTCAACAACCTGGAGGTTGATAGCAGATATAATTCGTGGCCTTCTAGTTTACAAGAGTTGCTTCGACCCACCTTTCCTGGTGTTATTCGGCAGATCAGGAAAAACTTACATAATATGGTTTTCATAGTTGATCCTGCACATGAGACCACAGCAGAGTTGATGAACACAGCTGAGATGTTCCTTAGTAATCATATACCACTAAGAATTGGTTTTATCTTTGTGGTTAATGACTCTGAAGATGTTGATGGGATGCAAGATGCTGGAGTGGCTGTTCTTAGAGCATATAATTATGTTGCCCAAGAAGTGGATGATTATCATGCCTTCCAGACTCTGACACAT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr2:128107938\|128138852	hsa-miR-105-3p	1	1
chr2:128107938\|128138852	hsa-miR-212-5p	1	1
chr2:128107938\|128138852	hsa-miR-205-5p	1	1
chr2:128107938\|128138852	hsa-miR-148a-5p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:128107938\|128138852
ORF Type	ORF1
Protein Length	471
Nucleotide Length	1413
Protein Sequence	LEAAFQFLSPLQQNLFKFCLSLRSYSATIQAFQQIAADEPPPEGCNSFFSVHGKKTCESDTLEALLLTASERPKPLLFKGDHRYPSSNPESPVVIFYSEIGSEEFSNFHRQLISKSNAGKINYVFRHYIFNPRKEPVYLSGYGVELAIKSTEYKAKDDTQVKGTEVNTTVIGENDPIDEVQGFLFGKLRDLHPDLEGQLKELRKHLVESTNEMAPLKVWQLQDLSFQTAARILASPVELALVVMKDLSQNFPTKARAITKTAVSSELRTEVEENQKYFKGTLGLQPGDSALFINGLHMDLDTQDIFSLFDVLRNEARVMEGLHRLGIEGLSLHNVLKLNIQPSEADYAVDIRSPAISWVNNLEVDSRYNSWPSSLQELLRPTFPGVIRQIRKNLHNMVFIVDPAHETTAELMNTAEMFLSNHIPLRIGFIFVVNDSEDVDGMQDAGVAVLRAYNYVAQEVDDYHAFQTLTH
Nucleotide Sequence	TTGGAGGCTGCATTTCAGTTTCTGTCACCCCTCCAGCAGAATTTGTTTAAATTTTGTCTGTCCCTTCGTTCTTACTCAGCTACAATCCAAGCCTTCCAGCAGATAGCAGCTGATGAACCTCCACCAGAAGGATGTAATTCGTTTTTTTCAGTGCATGGAAAGAAGACTTGTGAATCTGATACCCTTGAGGCTCTTCTACTGACAGCCTCTGAAAGACCCAAACCTTTATTGTTCAAAGGAGATCACAGATATCCCTCGTCTAATCCTGAAAGCCCTGTGGTGATTTTCTACTCTGAGATTGGCTCTGAGGAATTTTCCAATTTTCACCGCCAGCTTATATCAAAAAGCAATGCAGGCAAAATCAATTATGTATTCAGACATTATATATTTAATCCCAGGAAGGAGCCTGTTTACCTCTCTGGCTATGGCGTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACTCAGGTGAAAGGAACTGAGGTAAACACCACAGTGATTGGTGAAAATGATCCTATTGATGAGGTTCAGGGGTTCCTCTTTGGAAAATTAAGAGATCTGCACCCCGACCTGGAGGGACAGTTGAAAGAACTCAGAAAGCATCTTGTAGAGAGCACCAATGAAATGGCACCTTTAAAGGTTTGGCAGTTGCAAGATCTCAGTTTCCAGACTGCTGCTCGAATCTTGGCTTCTCCTGTTGAGTTGGCTTTGGTTGTCATGAAGGATCTTAGTCAGAATTTTCCTACCAAAGCCAGAGCAATAACAAAAACAGCTGTGAGCTCAGAACTTAGAACCGAAGTGGAAGAGAATCAGAAGTATTTCAAGGGAACTTTAGGATTACAACCTGGAGATTCAGCCCTCTTCATCAATGGACTTCACATGGATTTAGATACACAGGATATATTCAGTCTGTTTGATGTGTTGAGGAATGAAGCTCGGGTAATGGAGGGTCTGCATAGATTGGGAATAGAAGGCCTTTCTCTGCATAATGTTTTGAAGCTGAACATCCAGCCCTCTGAGGCAGACTATGCCGTAGACATCCGGAGTCCTGCTATTTCATGGGTCAACAACCTGGAGGTTGATAGCAGATATAATTCGTGGCCTTCTAGTTTACAAGAGTTGCTTCGACCCACCTTTCCTGGTGTTATTCGGCAGATCAGGAAAAACTTACATAATATGGTTTTCATAGTTGATCCTGCACATGAGACCACAGCAGAGTTGATGAACACAGCTGAGATGTTCCTTAGTAATCATATACCACTAAGAATTGGTTTTATCTTTGTGGTTAATGACTCTGAAGATGTTGATGGGATGCAAGATGCTGGAGTGGCTGTTCTTAGAGCATATAATTATGTTGCCCAAGAAGTGGATGATTATCATGCCTTCCAGACTCTGACACAT

CircID	chr2:128107938\|128138852
ORF Type	ORF2
Protein Length	64
Nucleotide Length	192
Protein Sequence	MTTKANSTGEAKIRAAVWKLRSCNCQTFKGAISLVLSTRCFLSSFNCPSRSGCRSLNFPKRNP*
Nucleotide Sequence	ATGACAACCAAAGCCAACTCAACAGGAGAAGCCAAGATTCGAGCAGCAGTCTGGAAACTGAGATCTTGCAACTGCCAAACCTTTAAAGGTGCCATTTCATTGGTGCTCTCTACAAGATGCTTTCTGAGTTCTTTCAACTGTCCCTCCAGGTCGGGGTGCAGATCTCTTAATTTTCCAAAGAGGAACCCCTGA

CircID	chr2:128107938\|128138852
ORF Type	ORF3
Protein Length	54
Nucleotide Length	162
Protein Sequence	MKTILCKFFLICRITPGKVGRSNSCKLEGHELYLLSTSRLLTHEIAGLRMSTA*
Nucleotide Sequence	ATGAAAACCATATTATGTAAGTTTTTCCTGATCTGCCGAATAACACCAGGAAAGGTGGGTCGAAGCAACTCTTGTAAACTAGAAGGCCACGAATTATATCTGCTATCAACCTCCAGGTTGTTGACCCATGAAATAGCAGGACTCCGGATGTCTACGGCATAG

CircID	chr2:128107938\|128138852
ORF Type	ORF4
Protein Length	47
Nucleotide Length	141
Protein Sequence	MCQSLEGMIIIHFLGNIIICSKNSHSSILHPINIFRVINHKDKTNS*
Nucleotide Sequence	ATGTGTCAGAGTCTGGAAGGCATGATAATCATCCACTTCTTGGGCAACATAATTATATGCTCTAAGAACAGCCACTCCAGCATCTTGCATCCCATCAACATCTTCAGAGTCATTAACCACAAAGATAAAACCAATTCTTAG

CircID	chr2:128107938\|128138852
ORF Type	ORF5
Protein Length	45
Nucleotide Length	135
Protein Sequence	MQAKSIMYSDIIYLIPGRSLFTSLAMAWNWPLRALSTRPRMILR*
Nucleotide Sequence	ATGCAGGCAAAATCAATTATGTATTCAGACATTATATATTTAATCCCAGGAAGGAGCCTGTTTACCTCTCTGGCTATGGCGTGGAATTGGCCATTAAGAGCACTGAGTACAAGGCCAAGGATGATACTCAGGTGA

CircID	chr2:128107938\|128138852
ORF Type	ORF6
Protein Length	44
Nucleotide Length	132
Protein Sequence	MFSFKTLCRERPSIPNLCRPSITRASFLNTSNRLNISCVSKSM*
Nucleotide Sequence	ATGTTCAGCTTCAAAACATTATGCAGAGAAAGGCCTTCTATTCCCAATCTATGCAGACCCTCCATTACCCGAGCTTCATTCCTCAACACATCAAACAGACTGAATATATCCTGTGTATCTAAATCCATGTGA

CircID	chr2:128107938\|128138852
ORF Type	ORF7
Protein Length	38
Nucleotide Length	114
Protein Sequence	MQYWRLHFSFCHPSSRICLNFVCPFVLTQLQSKPSSR*
Nucleotide Sequence	ATGCAATATTGGAGGCTGCATTTCAGTTTCTGTCACCCCTCCAGCAGAATTTGTTTAAATTTTGTCTGTCCCTTCGTTCTTACTCAGCTACAATCCAAGCCTTCCAGCAGATAG

CircID	chr2:128107938\|128138852
ORF Type	ORF8
Protein Length	36
Nucleotide Length	108
Protein Sequence	MTLKMLMGCKMLEWLFLEHIIMLPKKWMIIMPSRL*
Nucleotide Sequence	ATGACTCTGAAGATGTTGATGGGATGCAAGATGCTGGAGTGGCTGTTCTTAGAGCATATAATTATGTTGCCCAAGAAGTGGATGATTATCATGCCTTCCAGACTCTGA

CircID	chr2:128107938\|128138852
ORF Type	ORF9
Protein Length	34
Nucleotide Length	102
Protein Sequence	MQRKAFYSQSMQTLHYPSFIPQHIKQTEYILCI*
Nucleotide Sequence	ATGCAGAGAAAGGCCTTCTATTCCCAATCTATGCAGACCCTCCATTACCCGAGCTTCATTCCTCAACACATCAAACAGACTGAATATATCCTGTGTATCTAA

CircID	chr2:128107938\|128138852
ORF Type	ORF10
Protein Length	30
Nucleotide Length	90
Protein Sequence	MNLHQKDVIRFFQCMERRLVNLIPLRLFY*
Nucleotide Sequence	ATGAACCTCCACCAGAAGGATGTAATTCGTTTTTTTCAGTGCATGGAAAGAAGACTTGTGAATCTGATACCCTTGAGGCTCTTCTACTGA

CircID	chr2:128107938\|128138852
ORF Type	ORF11
Protein Length	74
Nucleotide Length	222
Protein Sequence	FSKEEPLNLINRIIFTNHCGVYLSSFHLSIILGLVLSALNGQFHAIAREVNRLLPGIKYIMSEYIIDFACIAF*
Nucleotide Sequence	TTTTCCAAAGAGGAACCCCTGAACCTCATCAATAGGATCATTTTCACCAATCACTGTGGTGTTTACCTCAGTTCCTTTCACCTGAGTATCATCCTTGGCCTTGTACTCAGTGCTCTTAATGGCCAATTCCACGCCATAGCCAGAGAGGTAAACAGGCTCCTTCCTGGGATTAAATATATAATGTCTGAATACATAATTGATTTTGCCTGCATTGCTTTTTGA

CircID	chr2:128107938\|128138852
ORF Type	ORF12
Protein Length	55
Nucleotide Length	165
Protein Sequence	LNNKGLGLSEAVSRRASRVSDSQVFFPCTEKNELHPSGGGSSAAICWKAWIVAE*
Nucleotide Sequence	TTGAACAATAAAGGTTTGGGTCTTTCAGAGGCTGTCAGTAGAAGAGCCTCAAGGGTATCAGATTCACAAGTCTTCTTTCCATGCACTGAAAAAAACGAATTACATCCTTCTGGTGGAGGTTCATCAGCTGCTATCTGCTGGAAGGCTTGGATTGTAGCTGAGTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr2:128107938\|128138852	NOP56	2	0	1
chr2:128107938\|128138852	ELAVL1	3	3	4
chr2:128107938\|128138852	NUMA1	2	0	0
chr2:128107938\|128138852	SF3B4	0	0	1
chr2:128107938\|128138852	FKBP4	0	0	1
chr2:128107938\|128138852	CNBP	0	0	1
chr2:128107938\|128138852	UPF1	0	0	1
chr2:128107938\|128138852	TNRC6A	0	0	1
chr2:128107938\|128138852	FMR1	0	0	4
chr2:128107938\|128138852	TROVE2	0	0	1
chr2:128107938\|128138852	FUS	2	0	1
chr2:128107938\|128138852	DGCR8	1	1	4
chr2:128107938\|128138852	SRSF7	0	0	1
chr2:128107938\|128138852	SRSF1	0	0	11
chr2:128107938\|128138852	NOP58	2	0	6
chr2:128107938\|128138852	U2AF1	0	0	3
chr2:128107938\|128138852	U2AF2	14	1	11
chr2:128107938\|128138852	SRSF9	0	0	3
chr2:128107938\|128138852	DDX54	0	0	12
chr2:128107938\|128138852	LSM11	0	0	1
chr2:128107938\|128138852	RBM10	1	0	0
chr2:128107938\|128138852	PCBP2	0	0	1
chr2:128107938\|128138852	MSI2	0	0	7
chr2:128107938\|128138852	PTBP1	0	0	5
chr2:128107938\|128138852	HNRNPC	3	0	0
chr2:128107938\|128138852	TRA2A	0	0	7
chr2:128107938\|128138852	KHSRP	1	0	0
chr2:128107938\|128138852	DDX3X	0	0	3
chr2:128107938\|128138852	LARP7	0	0	2
chr2:128107938\|128138852	SMNDC1	0	1	4
chr2:128107938\|128138852	AUH	0	0	1
chr2:128107938\|128138852	ACIN1	0	0	12
chr2:128107938\|128138852	LIN28B	0	1	26
chr2:128107938\|128138852	LIN28A	0	0	3
chr2:128107938\|128138852	FXR1	0	0	3
chr2:128107938\|128138852	FXR2	0	0	2
chr2:128107938\|128138852	SND1	0	0	27
chr2:128107938\|128138852	IGF2BP1	0	0	4
chr2:128107938\|128138852	BUD13	0	0	9
chr2:128107938\|128138852	IGF2BP3	0	0	3
chr2:128107938\|128138852	IGF2BP2	2	1	11
chr2:128107938\|128138852	HNRNPUL1	2	0	0
chr2:128107938\|128138852	TAF15	0	3	1
chr2:128107938\|128138852	GTF2F1	0	0	1
chr2:128107938\|128138852	RBFOX2	1	0	1
chr2:128107938\|128138852	PRPF8	0	0	2
chr2:128107938\|128138852	SLTM	0	0	2
chr2:128107938\|128138852	EIF4G2	0	0	2
chr2:128107938\|128138852	RBM47	1	1	11
chr2:128107938\|128138852	CSTF2T	1	0	3
chr2:128107938\|128138852	BCCIP	1	0	0
chr2:128107938\|128138852	TIA1	0	0	1
chr2:128107938\|128138852	RBM22	0	1	0
chr2:128107938\|128138852	XRN2	0	0	1
chr2:128107938\|128138852	YWHAG	1	0	0
chr2:128107938\|128138852	FBL	0	2	3
chr2:128107938\|128138852	EIF4A3	0	4	24
chr2:128107938\|128138852	AGO2	0	0	3

CircRNA Information