CircRNA Information

General Information
circRNA Basic Information
CircID chr2:132963720|132963869
Strand -
CircType exon
Host Gene ENSG00000176771.14;
Algorism CIRI2;
Sequence CTCTAGAGCTTTCAATCTCTCTAATAGCAATTTGGTCTTTTCTTTTCCCTCATCTGTACTGCTGCTTTCACTCCTCGAATCCTCATCAACCACCATGTGAAGATCTTCCAAAGCTTCCTTATGTTTTCTCTCTTCCTCTGACAGCTTTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:132963720|132963869 hsa-miR-15a-5p 0 0 1
chr2:132963720|132963869 hsa-miR-15a-3p 0 0 1
chr2:132963720|132963869 hsa-miR-23a-5p 0 0 1
chr2:132963720|132963869 hsa-miR-23a-3p 0 0 1
chr2:132963720|132963869 hsa-miR-15b-5p 0 0 1
chr2:132963720|132963869 hsa-miR-15b-3p 0 0 1
chr2:132963720|132963869 hsa-miR-23b-5p 0 0 1
chr2:132963720|132963869 hsa-miR-23b-3p 0 0 1
chr2:132963720|132963869 hsa-miR-195-5p 0 0 1
chr2:132963720|132963869 hsa-miR-195-3p 0 0 1
chr2:132963720|132963869 hsa-miR-320a-5p 0 0 1
chr2:132963720|132963869 hsa-miR-320a-3p 0 0 1
chr2:132963720|132963869 hsa-miR-424-5p 0 0 1
chr2:132963720|132963869 hsa-miR-424-3p 0 0 1
chr2:132963720|132963869 hsa-miR-412-5p 0 0 1
chr2:132963720|132963869 hsa-miR-412-3p 0 0 1
chr2:132963720|132963869 hsa-miR-488-5p 0 0 1
chr2:132963720|132963869 hsa-miR-488-3p 0 0 1
chr2:132963720|132963869 hsa-miR-497-5p 0 0 1
chr2:132963720|132963869 hsa-miR-497-3p 0 0 1
chr2:132963720|132963869 hsa-miR-563 0 0 1
chr2:132963720|132963869 hsa-miR-570-5p 0 0 1
chr2:132963720|132963869 hsa-miR-570-3p 0 0 1
chr2:132963720|132963869 hsa-miR-611 0 0 1
chr2:132963720|132963869 hsa-miR-1303 0 0 1
chr2:132963720|132963869 hsa-miR-302f 0 0 1
chr2:132963720|132963869 hsa-miR-876-3p 0 0 1
chr2:132963720|132963869 hsa-miR-518d-5p 0 0 1
chr2:132963720|132963869 hsa-miR-519b-5p 0 0 1
chr2:132963720|132963869 hsa-miR-519c-5p 0 0 1
chr2:132963720|132963869 hsa-miR-520c-5p 0 0 1
chr2:132963720|132963869 hsa-miR-320b 0 1 1
chr2:132963720|132963869 hsa-miR-320c 0 1 1
chr2:132963720|132963869 hsa-miR-320d 0 0 1
chr2:132963720|132963869 hsa-miR-151-5p 0 0 1
chr2:132963720|132963869 hsa-miR-323-5p 0 0 1
chr2:132963720|132963869 hsa-miR-16 0 0 1
chr2:132963720|132963869 hsa-miR-7 0 0 1
chr2:132963720|132963869 hsa-miR-526a 0 0 1
chr2:132963720|132963869 hsa-miR-1185 0 0 1
chr2:132963720|132963869 hsa-miR-608 1 0 0
chr2:132963720|132963869 hsa-miR-765 1 0 0
chr2:132963720|132963869 hsa-miR-920 0 1 0
chr2:132963720|132963869 hsa-miR-3125 1 1 0
chr2:132963720|132963869 hsa-miR-3131 1 0 0
chr2:132963720|132963869 hsa-miR-3132 1 0 0
chr2:132963720|132963869 hsa-miR-3175 1 0 0
chr2:132963720|132963869 hsa-miR-3188 1 0 0
chr2:132963720|132963869 hsa-miR-4306 1 0 0
chr2:132963720|132963869 hsa-miR-4270 1 0 0
chr2:132963720|132963869 hsa-miR-3714 1 1 0
chr2:132963720|132963869 hsa-miR-3916 1 0 0
chr2:132963720|132963869 hsa-miR-3936 1 0 0
chr2:132963720|132963869 hsa-miR-4429 0 1 0
chr2:132963720|132963869 hsa-miR-4450 1 0 0
chr2:132963720|132963869 hsa-miR-4644 1 1 0
chr2:132963720|132963869 hsa-miR-4689 1 0 0
chr2:132963720|132963869 hsa-miR-4706 1 0 0
chr2:132963720|132963869 hsa-miR-4710 1 0 0
chr2:132963720|132963869 hsa-miR-4721 1 0 0
chr2:132963720|132963869 hsa-miR-4779 1 0 0
chr2:132963720|132963869 hsa-miR-5698 1 0 0
chr2:132963720|132963869 hsa-miR-5739 1 0 0
chr2:132963720|132963869 hsa-miR-6079 1 0 0
chr2:132963720|132963869 hsa-miR-6081 1 0 0
chr2:132963720|132963869 hsa-miR-6088 1 0 0
chr2:132963720|132963869 hsa-miR-6124 0 1 0
chr2:132963720|132963869 hsa-miR-6127 1 0 0
chr2:132963720|132963869 hsa-miR-6133 1 0 0
chr2:132963720|132963869 hsa-miR-6165 1 0 0
chr2:132963720|132963869 hsa-miR-8085 1 0 0
chr2:132963720|132963869 hsa-miR-4433b-3p 1 1 0
chr2:132963720|132963869 hsa-miR-6734-5p 1 0 0
chr2:132963720|132963869 hsa-miR-504-3p 1 0 0
chr2:132963720|132963869 hsa-miR-323a-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6747-5p 1 0 0
chr2:132963720|132963869 hsa-miR-4433a-3p 1 0 0
chr2:132963720|132963869 hsa-miR-671-5p 1 0 0
chr2:132963720|132963869 hsa-miR-125a-3p 1 0 0
chr2:132963720|132963869 hsa-miR-6510-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6833-5p 1 0 0
chr2:132963720|132963869 hsa-miR-5187-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6873-5p 1 1 0
chr2:132963720|132963869 hsa-miR-7847-3p 1 0 0
chr2:132963720|132963869 hsa-miR-6746-5p 1 0 0
chr2:132963720|132963869 hsa-miR-4709-3p 1 0 0
chr2:132963720|132963869 hsa-miR-6820-5p 1 0 0
chr2:132963720|132963869 hsa-miR-197-5p 1 0 0
chr2:132963720|132963869 hsa-miR-8069 1 0 0
chr2:132963720|132963869 hsa-miR-1224-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6770-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6760-5p 1 1 0
chr2:132963720|132963869 hsa-miR-6782-5p 1 0 0
chr2:132963720|132963869 hsa-miR-185-5p 1 0 0
chr2:132963720|132963869 hsa-miR-3691-5p 1 0 0
chr2:132963720|132963869 hsa-miR-877-5p 1 0 0
chr2:132963720|132963869 hsa-miR-4717-3p 0 1 0
chr2:132963720|132963869 hsa-miR-6847-5p 0 1 0
chr2:132963720|132963869 hsa-miR-3202 1 1 0
chr2:132963720|132963869 hsa-miR-149-3p 1 0 0
chr2:132963720|132963869 hsa-miR-3162-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6878-5p 1 1 0
chr2:132963720|132963869 hsa-miR-5584-5p 1 1 0
chr2:132963720|132963869 hsa-miR-6869-5p 1 0 0
chr2:132963720|132963869 hsa-miR-3944-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6801-5p 0 1 0
chr2:132963720|132963869 hsa-miR-214-3p 1 0 0
chr2:132963720|132963869 hsa-miR-6769b-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6778-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6812-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6743-5p 1 0 0
chr2:132963720|132963869 hsa-miR-1249-5p 0 1 0
chr2:132963720|132963869 hsa-miR-6722-3p 1 0 0
chr2:132963720|132963869 hsa-miR-6797-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6780b-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6738-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6777-5p 1 1 0
chr2:132963720|132963869 hsa-miR-6858-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6889-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6731-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6739-5p 1 1 0
chr2:132963720|132963869 hsa-miR-6856-5p 1 0 0
chr2:132963720|132963869 hsa-miR-6855-5p 1 0 0
chr2:132963720|132963869 hsa-miR-4700-5p 1 0 0
chr2:132963720|132963869 hsa-miR-3679-5p 1 0 0
chr2:132963720|132963869 hsa-miR-4716-3p 0 1 0
chr2:132963720|132963869 hsa-miR-6838-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:132963720|132963869
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MYCCFHSSNPHQPPCEDLPKLPYVFSLPLTAF
Nucleotide Sequence CTGTACTGCTGCTTTCACTCCTCGAATCCTCATCAACCACCATGTGAAGATCTTCCAAAGCTTCCTTATGTTTTCTCTCTTCCTCTGACAGCTTTT
CircID chr2:132963720|132963869
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MSEEERKHKEALEDLHMVVDEDSRSESSSTDEGKEKTKLLLERLKALE
Nucleotide Sequence CTGTCAGAGGAAGAGAGAAAACATAAGGAAGCTTTGGAAGATCTTCACATGGTGGTTGATGAGGATTCGAGGAGTGAAAGCAGCAGTACAGATGAGGGAAAAGAAAAGACCAAATTGCTATTAGAGAGATTGAAAGCTCTAGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab