CircRNA Information

General Information
circRNA Basic Information
CircID chr2:136114925|136115110
Strand -
CircType exon
Host Gene ENSG00000121966.6;
Algorism CIRI2;
Sequence CTCGCTTTCCTTTGGAGAGGATCTTGAGGCTGGACCCTCTGCTCACAGAGGTGAGTGCGTGCTGGGCAGAGGTTTTAAATTTGGCTCCAAGGAAAGCATAGAGGATGGGGTTCAGACAACAGTGGAAGAAAGCTAGGGCCTCGGTGATGGAAATCCACTTGTGCACAGTGTTCTCAAACTCACACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:136114925|136115110 hsa-miR-141-5p 0 0 1
chr2:136114925|136115110 hsa-miR-141-3p 0 0 1
chr2:136114925|136115110 hsa-miR-146a-5p 0 0 1
chr2:136114925|136115110 hsa-miR-146a-3p 0 0 1
chr2:136114925|136115110 hsa-miR-200a-5p 0 0 1
chr2:136114925|136115110 hsa-miR-200a-3p 0 0 1
chr2:136114925|136115110 hsa-miR-432-5p 0 0 1
chr2:136114925|136115110 hsa-miR-432-3p 0 0 1
chr2:136114925|136115110 hsa-miR-580-5p 0 0 1
chr2:136114925|136115110 hsa-miR-580-3p 0 0 1
chr2:136114925|136115110 hsa-miR-587 0 0 1
chr2:136114925|136115110 hsa-miR-589-5p 0 0 1
chr2:136114925|136115110 hsa-miR-589-3p 0 0 1
chr2:136114925|136115110 hsa-miR-632 0 0 1
chr2:136114925|136115110 hsa-miR-1231 0 0 1
chr2:136114925|136115110 hsa-miR-1208 0 0 1
chr2:136114925|136115110 hsa-miR-1290 0 0 1
chr2:136114925|136115110 hsa-miR-502-5p 0 0 1
chr2:136114925|136115110 hsa-miR-324-3p 1 0 1
chr2:136114925|136115110 hsa-miR-146b-5p 0 0 1
chr2:136114925|136115110 hsa-miR-876-5p 0 0 1
chr2:136114925|136115110 hsa-miR-515-5p 0 0 1
chr2:136114925|136115110 hsa-miR-521 0 0 1
chr2:136114925|136115110 hsa-miR-1300 0 0 1
chr2:136114925|136115110 hsa-miR-346 1 0 0
chr2:136114925|136115110 hsa-miR-1538 1 0 0
chr2:136114925|136115110 hsa-miR-4329 1 0 0
chr2:136114925|136115110 hsa-miR-4747-3p 1 0 0
chr2:136114925|136115110 hsa-miR-18a-3p 1 0 0
chr2:136114925|136115110 hsa-miR-128-1-5p 1 0 0
chr2:136114925|136115110 hsa-miR-3189-5p 1 0 0
chr2:136114925|136115110 hsa-miR-6884-3p 1 0 0
chr2:136114925|136115110 hsa-miR-939-3p 1 0 0
chr2:136114925|136115110 hsa-miR-1304-3p 1 0 0
chr2:136114925|136115110 hsa-miR-7160-3p 1 0 0
chr2:136114925|136115110 hsa-miR-4724-5p 1 0 0
chr2:136114925|136115110 hsa-miR-1914-5p 1 0 0
chr2:136114925|136115110 hsa-miR-4649-3p 1 0 0
chr2:136114925|136115110 hsa-miR-6851-3p 1 0 0
chr2:136114925|136115110 hsa-miR-4745-3p 1 0 0
chr2:136114925|136115110 hsa-miR-6877-3p 1 0 0
chr2:136114925|136115110 hsa-miR-6756-3p 1 0 0
chr2:136114925|136115110 hsa-miR-6775-3p 1 0 0
chr2:136114925|136115110 hsa-miR-523-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr2:136114925|136115110
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MERILRLDPLLTEVSACWAEVLNLAPRKA
Nucleotide Sequence TTGGAGAGGATCTTGAGGCTGGACCCTCTGCTCACAGAGGTGAGTGCGTGCTGGGCAGAGGTTTTAAATTTGGCTCCAAGGAAAGCATAG

CircID chr2:136114925|136115110
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MGFRQQWKKARASVMEIHLCTVFSNSH
Nucleotide Sequence ATGGGGTTCAGACAACAGTGGAAGAAAGCTAGGGCCTCGGTGATGGAAATCCACTTGTGCACAGTGTTCTCAAACTCACAC

CircID chr2:136114925|136115110
ORF Type ORF3
Protein Length 38
Nucleotide Length 114
Protein Sequence MNPILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKR
Nucleotide Sequence CTGAACCCCATCCTCTATGCTTTCCTTGGAGCCAAATTTAAAACCTCTGCCCAGCACGCACTCACCTCTGTGAGCAGAGGGTCCAGCCTCAAGATCCTCTCCAAAGGAAAGCGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites