CircNet

General Information

circRNA Basic Information

CircID	chr2:140839991\|140923147
Strand	-
CircType	exon
Host Gene	ENSG00000168702.17;
Algorism	find_circ;CIRI2;DCC;
Sequence	AGATTCATTCTCCTGCTGGTTGTAACGGAAATGAATTTCAGTGCCACCCTGATGGTAATTGCGTTCCTGATTTGTGGCGCTGTGATGGAGAAAAAGACTGTGAAGATGGTAGTGATGAAAAAGGTTGCAATGGTACCATACGATTGTGTGACCACAAAACCAAGTTTTCCTGTTGGAGTACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:140839991\|140923147
ORF Type	ORF1
Protein Length	51
Nucleotide Length	153
Protein Sequence	MNFSATLMVIAFLICGAVMEKKTVKMVVMKKVAMVPYDCVTTKPSFPVGVQ
Nucleotide Sequence	ATGAATTTCAGTGCCACCCTGATGGTAATTGCGTTCCTGATTTGTGGCGCTGTGATGGAGAAAAAGACTGTGAAGATGGTAGTGATGAAAAAGGTTGCAATGGTACCATACGATTGTGTGACCACAAAACCAAGTTTTCCTGTTGGAGTACAG

CircID	chr2:140839991\|140923147
ORF Type	ORF2
Protein Length	34
Nucleotide Length	102
Protein Sequence	MVPLQPFSSLPSSQSFSPSQRHKSGTQLPSGWH*
Nucleotide Sequence	ATGGTACCATTGCAACCTTTTTCATCACTACCATCTTCACAGTCTTTTTCTCCATCACAGCGCCACAAATCAGGAACGCAATTACCATCAGGGTGGCACTGA

CircID	chr2:140839991\|140923147
ORF Type	ORF3
Protein Length	61
Nucleotide Length	183
Protein Sequence	LYSNRKTWFCGHTIVWYHCNLFHHYHLHSLFLHHSATNQERNYHQGGTEIHFRYNQQENES
Nucleotide Sequence	CTGTACTCCAACAGGAAAACTTGGTTTTGTGGTCACACAATCGTATGGTACCATTGCAACCTTTTTCATCACTACCATCTTCACAGTCTTTTTCTCCATCACAGCGCCACAAATCAGGAACGCAATTACCATCAGGGTGGCACTGAAATTCATTTCCGTTACAACCAGCAGGAGAATGAATCT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr2:140839991\|140923147	ELAVL1	4	0	0
chr2:140839991\|140923147	HNRNPA1	8	8	0
chr2:140839991\|140923147	SRSF1	1	2	0
chr2:140839991\|140923147	NOP58	1	0	1
chr2:140839991\|140923147	U2AF2	15	5	0
chr2:140839991\|140923147	TARDBP	0	6	0
chr2:140839991\|140923147	TAF15	1	1	0
chr2:140839991\|140923147	PTBP1	10	0	0
chr2:140839991\|140923147	HNRNPC	7	2	0
chr2:140839991\|140923147	CPSF3	0	1	0
chr2:140839991\|140923147	NUDT21	0	1	0
chr2:140839991\|140923147	EIF4A3	0	0	3
chr2:140839991\|140923147	FUS	1	1	0

CircRNA Information