CircRNA Information

General Information
circRNA Basic Information
CircID chr2:15628449|15628839
Strand +
CircType exon
Host Gene ENSG00000079785.13;
Algorism CIRI2;
Sequence CTTTTCTTTTTCTGTTGCCACCAGGGAAATTGCCAGACCCATCCTGAAAGATGGTTAAAAGCCTTCTATTAGACTTTATTCCTAAAGCATACAAGCTTAAAAATGGGGGAAAAAAAATTGCAGAAGTACCTTTCAGCTCTTCCTACTCTGCCAATTCGATGTACGTAGTTTTGCTTTTCATCGGGCAGAGTGACATTTATAACTATAAATAAAAACCATTATTAACAATTGCCAGTAGTTTCTAAATTTTTCAAACATATTAGAAGGCTTTACTTTAGATTCCGTAACAATCACACTACAGGCATAAAAAGTTGCTTTTTACCATAAGGAACACCGTGGATATCAATTCCTCTAGCAGCTACATCTGTGCAAATCAAGAATCTTACATCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:15628449|15628839 hsa-miR-22-5p 0 0 1
chr2:15628449|15628839 hsa-miR-22-3p 0 0 1
chr2:15628449|15628839 hsa-miR-340-5p 0 0 1
chr2:15628449|15628839 hsa-miR-340-3p 0 0 1
chr2:15628449|15628839 hsa-miR-488-5p 0 0 1
chr2:15628449|15628839 hsa-miR-488-3p 0 0 1
chr2:15628449|15628839 hsa-miR-193b-5p 0 0 1
chr2:15628449|15628839 hsa-miR-193b-3p 0 0 1
chr2:15628449|15628839 hsa-miR-526b-5p 0 0 1
chr2:15628449|15628839 hsa-miR-526b-3p 0 0 1
chr2:15628449|15628839 hsa-miR-507 0 0 1
chr2:15628449|15628839 hsa-miR-557 0 1 1
chr2:15628449|15628839 hsa-miR-559 0 0 1
chr2:15628449|15628839 hsa-miR-569 0 0 1
chr2:15628449|15628839 hsa-miR-584-5p 0 0 1
chr2:15628449|15628839 hsa-miR-584-3p 0 0 1
chr2:15628449|15628839 hsa-miR-606 0 0 1
chr2:15628449|15628839 hsa-miR-643 0 0 1
chr2:15628449|15628839 hsa-miR-648 0 0 1
chr2:15628449|15628839 hsa-miR-651-5p 0 0 1
chr2:15628449|15628839 hsa-miR-651-3p 0 0 1
chr2:15628449|15628839 hsa-miR-668-5p 0 0 1
chr2:15628449|15628839 hsa-miR-668-3p 0 0 1
chr2:15628449|15628839 hsa-miR-1323 0 0 1
chr2:15628449|15628839 hsa-miR-891b 0 0 1
chr2:15628449|15628839 hsa-miR-892b 0 0 1
chr2:15628449|15628839 hsa-miR-877-5p 0 0 1
chr2:15628449|15628839 hsa-miR-877-3p 0 0 1
chr2:15628449|15628839 hsa-miR-297 0 0 1
chr2:15628449|15628839 hsa-miR-548j-5p 0 0 1
chr2:15628449|15628839 hsa-miR-548j-3p 0 0 1
chr2:15628449|15628839 hsa-miR-548k 0 0 1
chr2:15628449|15628839 hsa-miR-548l 0 0 1
chr2:15628449|15628839 hsa-miR-548m 0 0 1
chr2:15628449|15628839 hsa-miR-548o-3p 0 0 1
chr2:15628449|15628839 hsa-miR-548p 0 0 1
chr2:15628449|15628839 hsa-miR-548o 0 0 1
chr2:15628449|15628839 hsa-miR-142-5p 0 0 1
chr2:15628449|15628839 hsa-miR-193a-5p 0 0 1
chr2:15628449|15628839 hsa-miR-361-3p 0 0 1
chr2:15628449|15628839 hsa-miR-532-5p 0 0 1
chr2:15628449|15628839 hsa-miR-576-5p 0 0 1
chr2:15628449|15628839 hsa-miR-324-3p 0 0 1
chr2:15628449|15628839 hsa-miR-548b-5p 0 0 1
chr2:15628449|15628839 hsa-miR-548d-5p 0 0 1
chr2:15628449|15628839 hsa-miR-193a-3p 0 0 1
chr2:15628449|15628839 hsa-miR-491-3p 0 0 1
chr2:15628449|15628839 hsa-miR-508-3p 0 0 1
chr2:15628449|15628839 hsa-miR-142-3p 0 0 1
chr2:15628449|15628839 hsa-miR-548c-5p 0 0 1
chr2:15628449|15628839 hsa-miR-548a-5p 0 0 1
chr2:15628449|15628839 hsa-miR-548i 0 0 1
chr2:15628449|15628839 hsa-miR-1274a 0 0 1
chr2:15628449|15628839 hsa-miR-544 0 0 1
chr2:15628449|15628839 hsa-miR-219-5p 0 0 1
chr2:15628449|15628839 hsa-miR-548h 0 0 1
chr2:15628449|15628839 hsa-miR-765 1 1 0
chr2:15628449|15628839 hsa-miR-2861 1 0 0
chr2:15628449|15628839 hsa-miR-3132 1 0 0
chr2:15628449|15628839 hsa-miR-3916 0 1 0
chr2:15628449|15628839 hsa-miR-6077 1 1 0
chr2:15628449|15628839 hsa-miR-8065 0 1 0
chr2:15628449|15628839 hsa-miR-8077 1 0 0
chr2:15628449|15628839 hsa-miR-3692-5p 0 1 0
chr2:15628449|15628839 hsa-miR-3064-5p 1 0 0
chr2:15628449|15628839 hsa-miR-100-3p 0 1 0
chr2:15628449|15628839 hsa-miR-185-3p 1 0 0
chr2:15628449|15628839 hsa-miR-6877-5p 1 0 0
chr2:15628449|15628839 hsa-miR-1237-3p 1 0 0
chr2:15628449|15628839 hsa-miR-7849-3p 0 1 0
chr2:15628449|15628839 hsa-miR-4444 0 1 0
chr2:15628449|15628839 hsa-miR-513b-3p 0 1 0
chr2:15628449|15628839 hsa-miR-6756-5p 1 0 0
chr2:15628449|15628839 hsa-miR-6831-5p 1 0 0
chr2:15628449|15628839 hsa-miR-6731-5p 1 0 0
chr2:15628449|15628839 hsa-miR-550a-5p 1 0 0
chr2:15628449|15628839 hsa-miR-9851-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr2:15628449|15628839
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MPVVSKFFKHIRRLYFRFRNNHTTGIKSCFLP
Nucleotide Sequence TTGCCAGTAGTTTCTAAATTTTTCAAACATATTAGAAGGCTTTACTTTAGATTCCGTAACAATCACACTACAGGCATAAAAAGTTGCTTTTTACCATAA

CircID chr2:15628449|15628839
ORF Type ORF2
Protein Length 53
Nucleotide Length 162
Protein Sequence MVKSLLLDFIPKAYKLKNGGKKIAEVPFSSSYSANSMYVVLLFIGQSDIYNYK
Nucleotide Sequence ATGGTTAAAAGCCTTCTATTAGACTTTATTCCTAAAGCATACAAGCTTAAAAATGGGGGAAAAAAAATTGCAGAAGTACCTTTCAGCTCTTCCTACTCTGCCAATTCGATGTACGTAGTTTTGCTTTTCATCGGGCAGAGTGACATTTATAACTATAAATAA

CircID chr2:15628449|15628839
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MLFTIRNTVDINSSSSYICANQESYI
Nucleotide Sequence TTGCTTTTTACCATAAGGAACACCGTGGATATCAATTCCTCTAGCAGCTACATCTGTGCAAATCAAGAATCTTACATC

CircID chr2:15628449|15628839
ORF Type ORF4
Protein Length 45
Nucleotide Length 135
Protein Sequence MKGTSAIFFPPFLSLYALGIKSNRRLLTIFQDGSGNFPGGNRKRK
Nucleotide Sequence CTGAAAGGTACTTCTGCAATTTTTTTTCCCCCATTTTTAAGCTTGTATGCTTTAGGAATAAAGTCTAATAGAAGGCTTTTAACCATCTTTCAGGATGGGTCTGGCAATTTCCCTGGTGGCAACAGAAAAAGAAAA

CircID chr2:15628449|15628839
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MFEKFRNYWQLLIMVFIYSYKCHSAR
Nucleotide Sequence ATGTTTGAAAAATTTAGAAACTACTGGCAATTGTTAATAATGGTTTTTATTTATAGTTATAAATGTCACTCTGCCCGATGA

CircID chr2:15628449|15628839
ORF Type ORF6
Protein Length 28
Nucleotide Length 87
Protein Sequence MICTDVAARGIDIHGVPYGKKQLFMPVV
Nucleotide Sequence TTGATTTGCACAGATGTAGCTGCTAGAGGAATTGATATCCACGGTGTTCCTTATGGTAAAAAGCAACTTTTTATGCCTGTAGTGTGA

CircID chr2:15628449|15628839
ORF Type ORF7
Protein Length 39
Nucleotide Length 120
Protein Sequence MPDEKQNYVHRIGRVGRAERYFCNFFSPIFKLVCFRNKV
Nucleotide Sequence CTGCCCGATGAAAAGCAAAACTACGTACATCGAATTGGCAGAGTAGGAAGAGCTGAAAGGTACTTCTGCAATTTTTTTTCCCCCATTTTTAAGCTTGTATGCTTTAGGAATAAAGTCTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites