CircRNA Information

General Information
circRNA Basic Information
CircID chr2:168138088|168182090
Strand -
CircType exon
Host Gene ENSG00000198648.10;
Algorism find_circ;CIRI2;DCC;
Sequence GCAGTGGAGCTACTGCTGTGGTTCAGGCAGCCCTATGCAAACCCAGGCAAGAACGTGTAGCAATAAAACGGATCAACTTGGAAAAATGCCAGACCAGTATGGATGAACTATTAAAAGAAATTCAAGCCATGAGTCAGTGCAGCCATCCCAACGTAGTGACCTATTACACCTCTTTTGTGGTCAAAGATGAACTTTGGCTGGTCATGAAATTACTAAGTGGAGGTTCAATGTTGGATATCATAAAATACATTGTCAACCGAGGAGAACACAAGAATGGAGTTCTGGAAGAGGCAATAATAGCAACAATTCTTAAAGAGGTTTTGGAAGGCTTAGACTATCTACACAGAAACGGTCAGATTCACAGGGATTTGAAAGCTGGTAATATTCTTCTGGGTGAGGATGGTTCAGTACAAATAGCAGATTTTGGGGTAAGTGCGTTCCTAGCAACAGGGGGTGATGTTACCCGAAATAAAGTAAGAAAAACATTCGTTGGCACCCCATGTTGGATGGCTCCTGAAGTCATGGAACAGGTGAGAGGCTATGACTTCAAGGCTGACATGTGGAGTTTTGGAATAACTGCCATTGAATTAGCAACAGGAGCAGCGCCTTATCACAAATATCCTCCCATGAAAGTGTTAATGTTGACTTTGCAAAATGATCCACCCACTTTGGAAACAGGGGTAGAGGATAAAGAAATGATGAAAAAGTACGGCAAGTCCTTTAGAAAATTACTTTCACTGTGTCTTCAGAAAGATCCTTCCAAAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:168138088|168182090 hsa-miR-125a-3p 0 1 1
chr2:168138088|168182090 hsa-miR-144-5p 0 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr2:168138088|168182090 ELAVL1 1 0 0
chr2:168138088|168182090 MOV10 0 0 1
chr2:168138088|168182090 NOP58 0 0 1
chr2:168138088|168182090 SRSF3 0 0 1
chr2:168138088|168182090 RBM47 1 0 1
chr2:168138088|168182090 SF3B4 1 0 0
chr2:168138088|168182090 U2AF2 0 0 2
chr2:168138088|168182090 CSTF2T 0 0 1
chr2:168138088|168182090 DDX54 0 0 8
chr2:168138088|168182090 CSTF2 1 0 0
chr2:168138088|168182090 FUS 1 2 0
chr2:168138088|168182090 CNBP 0 0 1
chr2:168138088|168182090 TARDBP 0 2 0
chr2:168138088|168182090 UPF1 1 0 0
chr2:168138088|168182090 TAF15 0 1 0
chr2:168138088|168182090 HNRNPL 0 1 0
chr2:168138088|168182090 IGF2BP2 0 0 8
chr2:168138088|168182090 EWSR1 0 0 1
chr2:168138088|168182090 EIF4A3 0 1 9
chr2:168138088|168182090 AGO2 0 1 8