CircNet

General Information

circRNA Basic Information

CircID	chr2:170948350\|170962946
Strand	+
CircType	exon
Host Gene	ENSG00000115806.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTACAAGAAAATTCCCCAGGACACAGAGCTGGTTTGGAGCCTTTCTTTGATTTTATTGTTTCTATTAATGGTTCAAGATTAAATAAAGACAATGACACTCTTAAGGATCTGCTGAAAGCAAACGTTGAAAAGCCTGTAAAGATGCTTATCTATAGCAGCAAAACATTGGAACTGCGAGAGACCTCAGTCACACCAAGTAACCTGTGGGGCGGCCAGGGCTTATTGGGAGTGAGCATTCGTTTCTGCAGCTTTGATGGGGCAAATGAAAATGTTTGGCATGTGCTGGAGGTGGAATCAAATTCTCCTGCAGCACTGGCAGGTCTTAGACCACACAGTGATTATATAATTGGAGCAGATACAGTCATGAATGAGGTCCAGCTGTCCTCAGTTAATCCCCCGTCTTTGTCACCACCAGGAACTACAGGAATTGAACAGAGTCTGACTGGACTTTCTATTAGCTCAACTCCACCAGCTGTCAGTAGTGTTCTCAGTACAGGTGTACCAACAGTACCGTTATTGCCACCACAAGTAAACCAGTCCCTCACTTCTGTGCCACCAATGAATCCAGCTACTACATTACCAGGTCTGATGCCTTTACCAGCAGGACTGCCCAACCTCCCCAACCTCAACCTCAACCTCCCAGCACCACACATCATGCCAGGGGTTGGCTTACCAGAACTTGTAAACCCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr2:170948350\|170962946	hsa-miR-298	1	1	1
chr2:170948350\|170962946	hsa-miR-1294	1	1	1
chr2:170948350\|170962946	hsa-miR-3137	1	1	1
chr2:170948350\|170962946	hsa-miR-3147	1	1	1
chr2:170948350\|170962946	hsa-miR-4316	1	1	1
chr2:170948350\|170962946	hsa-miR-3911	1	1	1
chr2:170948350\|170962946	hsa-miR-4522	1	1	1
chr2:170948350\|170962946	hsa-miR-4686	1	1	1
chr2:170948350\|170962946	hsa-miR-5572	1	1	1
chr2:170948350\|170962946	hsa-miR-138-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-29b-1-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-150-3p	1	1	1
chr2:170948350\|170962946	hsa-miR-370-3p	1	1	1
chr2:170948350\|170962946	hsa-miR-92a-1-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-6734-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-4731-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-4433a-3p	1	1	1
chr2:170948350\|170962946	hsa-miR-7106-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-6825-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-6857-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-219a-1-3p	1	1	1
chr2:170948350\|170962946	hsa-miR-29b-2-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-6799-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-3692-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-8071	1	1	1
chr2:170948350\|170962946	hsa-miR-7851-3p	1	1	1
chr2:170948350\|170962946	hsa-miR-3192-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-6880-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-3622b-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-3189-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-148a-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-6810-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-30b-3p	1	1	1
chr2:170948350\|170962946	hsa-miR-939-3p	1	1	1
chr2:170948350\|170962946	hsa-miR-1226-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-6834-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-4742-3p	1	1	1
chr2:170948350\|170962946	hsa-miR-584-3p	1	1	1
chr2:170948350\|170962946	hsa-miR-4774-5p	1	1	1
chr2:170948350\|170962946	hsa-miR-6715a-3p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:170948350\|170962946
ORF Type	ORF1
Protein Length	183
Nucleotide Length	549
Protein Sequence	MLIYSSKTLELRETSVTPSNLWGGQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTVMNEVQLSSVNPPSLSPPGTTGIEQSLTGLSISSTPPAVSSVLSTGVPTVPLLPPQVNQSLTSVPPMNPATTLPGLMPLPAGLPNLPNLNLNLPAPHIMPGVGLPELVNP
Nucleotide Sequence	ATGCTTATCTATAGCAGCAAAACATTGGAACTGCGAGAGACCTCAGTCACACCAAGTAACCTGTGGGGCGGCCAGGGCTTATTGGGAGTGAGCATTCGTTTCTGCAGCTTTGATGGGGCAAATGAAAATGTTTGGCATGTGCTGGAGGTGGAATCAAATTCTCCTGCAGCACTGGCAGGTCTTAGACCACACAGTGATTATATAATTGGAGCAGATACAGTCATGAATGAGGTCCAGCTGTCCTCAGTTAATCCCCCGTCTTTGTCACCACCAGGAACTACAGGAATTGAACAGAGTCTGACTGGACTTTCTATTAGCTCAACTCCACCAGCTGTCAGTAGTGTTCTCAGTACAGGTGTACCAACAGTACCGTTATTGCCACCACAAGTAAACCAGTCCCTCACTTCTGTGCCACCAATGAATCCAGCTACTACATTACCAGGTCTGATGCCTTTACCAGCAGGACTGCCCAACCTCCCCAACCTCAACCTCAACCTCCCAGCACCACACATCATGCCAGGGGTTGGCTTACCAGAACTTGTAAACCCA

CircID	chr2:170948350\|170962946
ORF Type	ORF2
Protein Length	106
Nucleotide Length	318
Protein Sequence	MMCGAGRLRLRLGRLGSPAGKGIRPGNVVAGFIGGTEVRDWFTCGGNNGTVGTPVLRTLLTAGGVELIESPVRLCSIPVVPGGDKDGGLTEDSWTSFMTVSAPII*
Nucleotide Sequence	ATGATGTGTGGTGCTGGGAGGTTGAGGTTGAGGTTGGGGAGGTTGGGCAGTCCTGCTGGTAAAGGCATCAGACCTGGTAATGTAGTAGCTGGATTCATTGGTGGCACAGAAGTGAGGGACTGGTTTACTTGTGGTGGCAATAACGGTACTGTTGGTACACCTGTACTGAGAACACTACTGACAGCTGGTGGAGTTGAGCTAATAGAAAGTCCAGTCAGACTCTGTTCAATTCCTGTAGTTCCTGGTGGTGACAAAGACGGGGGATTAACTGAGGACAGCTGGACCTCATTCATGACTGTATCTGCTCCAATTATATAA

CircID	chr2:170948350\|170962946
ORF Type	ORF3
Protein Length	31
Nucleotide Length	93
Protein Sequence	MGQMKMFGMCWRWNQILLQHWQVLDHTVII*
Nucleotide Sequence	ATGGGGCAAATGAAAATGTTTGGCATGTGCTGGAGGTGGAATCAAATTCTCCTGCAGCACTGGCAGGTCTTAGACCACACAGTGATTATATAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr2:170948350\|170962946	U2AF2	13	4	16
chr2:170948350\|170962946	ELAVL1	2	3	6
chr2:170948350\|170962946	SF3B4	3	0	1
chr2:170948350\|170962946	FAM120A	0	0	1
chr2:170948350\|170962946	KHDRBS1	1	0	0
chr2:170948350\|170962946	CELF2	2	0	0
chr2:170948350\|170962946	RC3H1	0	0	1
chr2:170948350\|170962946	PRPF8	0	4	2
chr2:170948350\|170962946	DDX42	0	0	1
chr2:170948350\|170962946	UPF1	0	1	0
chr2:170948350\|170962946	TNRC6A	1	0	1
chr2:170948350\|170962946	FMR1	0	0	14
chr2:170948350\|170962946	CPSF6	0	0	1
chr2:170948350\|170962946	NUDT21	0	1	0
chr2:170948350\|170962946	NONO	3	0	0
chr2:170948350\|170962946	CPSF3	0	0	1
chr2:170948350\|170962946	FUS	0	1	0
chr2:170948350\|170962946	DGCR8	0	0	1
chr2:170948350\|170962946	SRSF7	0	0	2
chr2:170948350\|170962946	SRSF1	1	2	4
chr2:170948350\|170962946	NOP58	1	5	5
chr2:170948350\|170962946	SRSF3	0	1	0
chr2:170948350\|170962946	U2AF1	4	0	9
chr2:170948350\|170962946	NOP56	1	2	1
chr2:170948350\|170962946	SRSF9	0	0	2
chr2:170948350\|170962946	DDX54	0	0	11
chr2:170948350\|170962946	HNRNPK	1	3	2
chr2:170948350\|170962946	PCBP2	1	5	3
chr2:170948350\|170962946	HNRNPA2B1	1	0	0
chr2:170948350\|170962946	MSI2	1	0	3
chr2:170948350\|170962946	HNRNPL	0	3	0
chr2:170948350\|170962946	PTBP1	1	1	6
chr2:170948350\|170962946	HNRNPC	1	2	0
chr2:170948350\|170962946	TRA2A	1	0	1
chr2:170948350\|170962946	HNRNPM	1	0	0
chr2:170948350\|170962946	ZNF184	0	0	1
chr2:170948350\|170962946	RBFOX2	5	0	0
chr2:170948350\|170962946	DDX3X	2	0	4
chr2:170948350\|170962946	ZC3H7B	0	0	1
chr2:170948350\|170962946	LARP7	0	0	1
chr2:170948350\|170962946	SMNDC1	1	0	1
chr2:170948350\|170962946	AUH	0	0	2
chr2:170948350\|170962946	SF3A3	1	0	0
chr2:170948350\|170962946	RANGAP1	0	1	2
chr2:170948350\|170962946	LIN28A	0	0	1
chr2:170948350\|170962946	LIN28B	0	1	1
chr2:170948350\|170962946	FXR1	0	0	3
chr2:170948350\|170962946	FXR2	1	0	4
chr2:170948350\|170962946	SND1	0	1	5
chr2:170948350\|170962946	IGF2BP1	0	0	17
chr2:170948350\|170962946	BUD13	0	1	3
chr2:170948350\|170962946	IGF2BP3	0	1	7
chr2:170948350\|170962946	IGF2BP2	1	5	13
chr2:170948350\|170962946	TARDBP	6	0	0
chr2:170948350\|170962946	YTHDC1	0	1	1
chr2:170948350\|170962946	TAF15	1	0	0
chr2:170948350\|170962946	GTF2F1	0	0	1
chr2:170948350\|170962946	KHSRP	1	0	0
chr2:170948350\|170962946	CNBP	0	0	1
chr2:170948350\|170962946	SLTM	0	0	1
chr2:170948350\|170962946	EIF4G2	0	0	1
chr2:170948350\|170962946	RBM47	0	0	3
chr2:170948350\|170962946	CSTF2T	1	1	5
chr2:170948350\|170962946	CSTF2	1	0	0
chr2:170948350\|170962946	RBM27	0	1	1
chr2:170948350\|170962946	LARP4B	0	0	1
chr2:170948350\|170962946	ILF3	0	2	1
chr2:170948350\|170962946	XRN2	0	0	1
chr2:170948350\|170962946	AGO2	0	0	11
chr2:170948350\|170962946	AGO1	0	0	2
chr2:170948350\|170962946	EWSR1	0	0	1
chr2:170948350\|170962946	EIF4A3	2	2	9
chr2:170948350\|170962946	FBL	1	2	1

CircRNA Information