CircRNA Information

General Information
circRNA Basic Information
CircID chr2:177219083|177219458
Strand +
CircType exon
Host Gene ENSG00000170144.17;
Algorism CIRI2;
Sequence CTGCAGCTTTCCTGACAACTCCTCGCTCTCTCTCCTGCTAAGAACTGTAGCCTGTTGAATAATACAGGATAAAAAAATTATTACACTCAGTGAACAGTTCCACATATTCTTTTATCATCATAATAAAAATTTAAAGATACCTACCCTTTTCTGCTGTTTTTAGAACCTTCTGCTACCATATCCACCACTTCCACCACCAGATCCATAACCACCTGAAAATATACATAGTATTTTAAAAGAAGTATGCACATTTTTTAAATTAAAAAGGCTCTAAAGAATTGATTTAAGAAAGTACTTACCACCATAGGGACTGCCCGAGCTTCTTCCACCAAAACTGCCCCCTTTCATGGGTCCATAATTTGATTGCTGTTGTCCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:177219083|177219458 hsa-miR-185-5p 0 0 1
chr2:177219083|177219458 hsa-miR-185-3p 0 0 1
chr2:177219083|177219458 hsa-miR-186-5p 0 0 1
chr2:177219083|177219458 hsa-miR-186-3p 0 0 1
chr2:177219083|177219458 hsa-miR-320a-5p 0 0 1
chr2:177219083|177219458 hsa-miR-320a-3p 0 0 1
chr2:177219083|177219458 hsa-miR-488-5p 0 0 1
chr2:177219083|177219458 hsa-miR-488-3p 0 0 1
chr2:177219083|177219458 hsa-miR-421 0 0 1
chr2:177219083|177219458 hsa-miR-298 1 1 1
chr2:177219083|177219458 hsa-miR-873-5p 0 0 1
chr2:177219083|177219458 hsa-miR-873-3p 0 0 1
chr2:177219083|177219458 hsa-miR-922 0 1 1
chr2:177219083|177219458 hsa-miR-1303 0 0 1
chr2:177219083|177219458 hsa-miR-1246 0 0 1
chr2:177219083|177219458 hsa-miR-1272 0 0 1
chr2:177219083|177219458 hsa-miR-1322 0 0 1
chr2:177219083|177219458 hsa-miR-139-5p 0 0 1
chr2:177219083|177219458 hsa-miR-125a-3p 1 0 1
chr2:177219083|177219458 hsa-miR-486-5p 0 0 1
chr2:177219083|177219458 hsa-miR-486-3p 0 0 1
chr2:177219083|177219458 hsa-miR-299-3p 0 0 1
chr2:177219083|177219458 hsa-miR-574-5p 0 0 1
chr2:177219083|177219458 hsa-miR-331-5p 0 0 1
chr2:177219083|177219458 hsa-miR-876-3p 0 0 1
chr2:177219083|177219458 hsa-miR-582-5p 0 0 1
chr2:177219083|177219458 hsa-miR-320b 0 0 1
chr2:177219083|177219458 hsa-miR-320c 0 0 1
chr2:177219083|177219458 hsa-miR-320d 0 0 1
chr2:177219083|177219458 hsa-miR-513a-3p 0 0 1
chr2:177219083|177219458 hsa-miR-590-3p 0 0 1
chr2:177219083|177219458 hsa-miR-548d-3p 0 0 1
chr2:177219083|177219458 hsa-miR-151-5p 0 0 1
chr2:177219083|177219458 hsa-miR-323-5p 0 0 1
chr2:177219083|177219458 hsa-miR-7 0 0 1
chr2:177219083|177219458 hsa-miR-649 0 1 0
chr2:177219083|177219458 hsa-miR-765 1 0 0
chr2:177219083|177219458 hsa-miR-760 1 0 0
chr2:177219083|177219458 hsa-miR-936 1 0 0
chr2:177219083|177219458 hsa-miR-1286 1 0 0
chr2:177219083|177219458 hsa-miR-1293 1 0 0
chr2:177219083|177219458 hsa-miR-1268a 1 0 0
chr2:177219083|177219458 hsa-miR-711 0 1 0
chr2:177219083|177219458 hsa-miR-2861 1 0 0
chr2:177219083|177219458 hsa-miR-3125 1 0 0
chr2:177219083|177219458 hsa-miR-3132 1 0 0
chr2:177219083|177219458 hsa-miR-548v 0 1 0
chr2:177219083|177219458 hsa-miR-3153 1 0 0
chr2:177219083|177219458 hsa-miR-3154 1 0 0
chr2:177219083|177219458 hsa-miR-3175 1 0 0
chr2:177219083|177219458 hsa-miR-3185 0 1 0
chr2:177219083|177219458 hsa-miR-4270 1 0 0
chr2:177219083|177219458 hsa-miR-3652 1 0 0
chr2:177219083|177219458 hsa-miR-3911 1 0 0
chr2:177219083|177219458 hsa-miR-1268b 1 0 0
chr2:177219083|177219458 hsa-miR-4430 1 0 0
chr2:177219083|177219458 hsa-miR-4488 1 0 0
chr2:177219083|177219458 hsa-miR-4510 1 0 0
chr2:177219083|177219458 hsa-miR-4516 1 0 0
chr2:177219083|177219458 hsa-miR-4517 1 0 0
chr2:177219083|177219458 hsa-miR-3976 1 0 0
chr2:177219083|177219458 hsa-miR-4644 1 1 0
chr2:177219083|177219458 hsa-miR-4648 1 0 0
chr2:177219083|177219458 hsa-miR-4657 1 1 0
chr2:177219083|177219458 hsa-miR-4706 1 0 0
chr2:177219083|177219458 hsa-miR-4737 1 0 0
chr2:177219083|177219458 hsa-miR-4739 1 0 0
chr2:177219083|177219458 hsa-miR-4752 1 0 0
chr2:177219083|177219458 hsa-miR-4784 1 0 0
chr2:177219083|177219458 hsa-miR-4788 1 0 0
chr2:177219083|177219458 hsa-miR-5090 1 1 0
chr2:177219083|177219458 hsa-miR-5572 1 0 0
chr2:177219083|177219458 hsa-miR-5681a 0 1 0
chr2:177219083|177219458 hsa-miR-5698 1 0 0
chr2:177219083|177219458 hsa-miR-5739 1 1 0
chr2:177219083|177219458 hsa-miR-6090 1 0 0
chr2:177219083|177219458 hsa-miR-6125 1 0 0
chr2:177219083|177219458 hsa-miR-6127 1 0 0
chr2:177219083|177219458 hsa-miR-6129 1 0 0
chr2:177219083|177219458 hsa-miR-6130 1 0 0
chr2:177219083|177219458 hsa-miR-6133 1 0 0
chr2:177219083|177219458 hsa-miR-6134 1 0 0
chr2:177219083|177219458 hsa-miR-6165 1 1 0
chr2:177219083|177219458 hsa-miR-6745 1 1 0
chr2:177219083|177219458 hsa-miR-6860 1 0 0
chr2:177219083|177219458 hsa-miR-7150 1 0 0
chr2:177219083|177219458 hsa-miR-8060 1 0 0
chr2:177219083|177219458 hsa-miR-8085 1 0 0
chr2:177219083|177219458 hsa-miR-12114 1 0 0
chr2:177219083|177219458 hsa-miR-4433b-3p 1 0 0
chr2:177219083|177219458 hsa-miR-323a-5p 1 0 0
chr2:177219083|177219458 hsa-miR-4433a-3p 1 0 0
chr2:177219083|177219458 hsa-miR-3150a-3p 1 0 0
chr2:177219083|177219458 hsa-miR-7106-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6825-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6799-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6510-5p 1 1 0
chr2:177219083|177219458 hsa-miR-3692-5p 1 0 0
chr2:177219083|177219458 hsa-miR-8071 1 0 0
chr2:177219083|177219458 hsa-miR-6833-5p 1 0 0
chr2:177219083|177219458 hsa-miR-4768-3p 0 1 0
chr2:177219083|177219458 hsa-miR-6515-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6880-5p 1 1 0
chr2:177219083|177219458 hsa-miR-7847-3p 1 0 0
chr2:177219083|177219458 hsa-miR-4695-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6746-5p 1 0 0
chr2:177219083|177219458 hsa-miR-4653-3p 1 0 0
chr2:177219083|177219458 hsa-miR-4722-5p 1 1 0
chr2:177219083|177219458 hsa-miR-197-5p 1 0 0
chr2:177219083|177219458 hsa-miR-7845-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6716-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6871-5p 1 0 0
chr2:177219083|177219458 hsa-miR-3190-3p 1 1 0
chr2:177219083|177219458 hsa-miR-6805-5p 1 1 0
chr2:177219083|177219458 hsa-miR-6760-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6782-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6835-5p 1 0 0
chr2:177219083|177219458 hsa-miR-1229-5p 1 0 0
chr2:177219083|177219458 hsa-miR-4764-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6771-5p 1 0 0
chr2:177219083|177219458 hsa-miR-4690-5p 1 0 0
chr2:177219083|177219458 hsa-miR-149-3p 1 0 0
chr2:177219083|177219458 hsa-miR-6878-5p 1 0 0
chr2:177219083|177219458 hsa-miR-4740-5p 1 0 0
chr2:177219083|177219458 hsa-miR-4800-5p 1 0 0
chr2:177219083|177219458 hsa-miR-4776-5p 1 0 0
chr2:177219083|177219458 hsa-miR-1225-5p 1 0 0
chr2:177219083|177219458 hsa-miR-4750-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6792-5p 1 0 0
chr2:177219083|177219458 hsa-miR-490-5p 1 0 0
chr2:177219083|177219458 hsa-miR-2116-5p 0 1 0
chr2:177219083|177219458 hsa-miR-10400-5p 1 0 0
chr2:177219083|177219458 hsa-miR-4763-3p 1 0 0
chr2:177219083|177219458 hsa-miR-6769b-5p 1 1 0
chr2:177219083|177219458 hsa-miR-6778-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6816-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6865-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6870-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6726-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6737-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6743-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6756-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6769a-5p 1 1 0
chr2:177219083|177219458 hsa-miR-6803-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6851-5p 1 0 0
chr2:177219083|177219458 hsa-miR-7110-5p 1 0 0
chr2:177219083|177219458 hsa-miR-1249-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6722-3p 1 0 0
chr2:177219083|177219458 hsa-miR-6751-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6779-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6780a-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6797-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6875-5p 1 0 0
chr2:177219083|177219458 hsa-miR-7111-5p 1 0 0
chr2:177219083|177219458 hsa-miR-4728-5p 1 0 0
chr2:177219083|177219458 hsa-miR-5196-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6780b-5p 1 0 0
chr2:177219083|177219458 hsa-miR-10526-3p 1 1 0
chr2:177219083|177219458 hsa-miR-1237-5p 1 0 0
chr2:177219083|177219458 hsa-miR-1909-3p 1 0 0
chr2:177219083|177219458 hsa-miR-328-5p 1 0 0
chr2:177219083|177219458 hsa-miR-4649-5p 1 0 0
chr2:177219083|177219458 hsa-miR-4749-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6729-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6735-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6777-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6846-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6848-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6858-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6889-5p 1 0 0
chr2:177219083|177219458 hsa-miR-4697-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6831-5p 1 0 0
chr2:177219083|177219458 hsa-miR-939-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6731-5p 1 1 0
chr2:177219083|177219458 hsa-miR-6758-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6856-5p 1 0 0
chr2:177219083|177219458 hsa-miR-3679-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6876-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6891-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6766-5p 1 0 0
chr2:177219083|177219458 hsa-miR-4667-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6849-5p 1 0 0
chr2:177219083|177219458 hsa-miR-6724-5p 1 0 0
chr2:177219083|177219458 hsa-miR-137-5p 1 0 0
chr2:177219083|177219458 hsa-miR-151a-5p 0 1 0
chr2:177219083|177219458 hsa-miR-6806-3p 0 1 0
chr2:177219083|177219458 hsa-miR-424-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr2:177219083|177219458
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MMIKEYVELFTECNNFFILYYSTGYSS
Nucleotide Sequence ATGATGATAAAAGAATATGTGGAACTGTTCACTGAGTGTAATAATTTTTTTATCCTGTATTATTCAACAGGCTACAGTTCTTAG
CircID chr2:177219083|177219458
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MKGGSFGGRSSGSPYGGKYFLKSIL
Nucleotide Sequence ATGAAAGGGGGCAGTTTTGGTGGAAGAAGCTCGGGCAGTCCCTATGGTGGTAAGTACTTTCTTAAATCAATTCTTTAG
CircID chr2:177219083|177219458
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MWNCSLSVIIFLSCIIQQATVLSRRESEELSGKLQ
Nucleotide Sequence ATGTGGAACTGTTCACTGAGTGTAATAATTTTTTTATCCTGTATTATTCAACAGGCTACAGTTCTTAGCAGGAGAGAGAGCGAGGAGTTGTCAGGAAAGCTGCAG
CircID chr2:177219083|177219458
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MVEEARAVPMVVSTFLNQFFRAFLI
Nucleotide Sequence TTGGTGGAAGAAGCTCGGGCAGTCCCTATGGTGGTAAGTACTTTCTTAAATCAATTCTTTAGAGCCTTTTTAATTTAA
CircID chr2:177219083|177219458
ORF Type ORF5
Protein Length 36
Nucleotide Length 111
Protein Sequence MCILLLKYYVYFQVVMDLVVEVVDMVAEGSKNSRKG
Nucleotide Sequence ATGTGCATACTTCTTTTAAAATACTATGTATATTTTCAGGTGGTTATGGATCTGGTGGTGGAAGTGGTGGATATGGTAGCAGAAGGTTCTAAAAACAGCAGAAAAGGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab