CircRNA Information

General Information
circRNA Basic Information
CircID chr2:177243233|177243445
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTACTTTACCAAACCTCCATAGAAATTAACTGGGCATGGACTGACCAGGTGGCTCAGATCTCCACCTTGAGGTCAAACAGCTTTGCTGCCCATGCTGGTGTACCCTCATCCTCCAAGGAAGTCCCCCATGAGGGTGGGCACACACAATCCAGCACATTCACACCGTAAGGCTTCTACAGATACTTCTGCCACTTCTAAACTCCCCAAGTGATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:177243233|177243445 hsa-miR-192-5p 0 0 1
chr2:177243233|177243445 hsa-miR-192-3p 0 0 1
chr2:177243233|177243445 hsa-miR-215-5p 0 0 1
chr2:177243233|177243445 hsa-miR-215-3p 0 0 1
chr2:177243233|177243445 hsa-miR-320a-5p 0 0 1
chr2:177243233|177243445 hsa-miR-320a-3p 0 0 1
chr2:177243233|177243445 hsa-miR-432-5p 0 0 1
chr2:177243233|177243445 hsa-miR-432-3p 0 0 1
chr2:177243233|177243445 hsa-miR-545-5p 0 0 1
chr2:177243233|177243445 hsa-miR-545-3p 0 0 1
chr2:177243233|177243445 hsa-miR-559 0 0 1
chr2:177243233|177243445 hsa-miR-617 0 1 1
chr2:177243233|177243445 hsa-miR-620 0 0 1
chr2:177243233|177243445 hsa-miR-625-5p 0 0 1
chr2:177243233|177243445 hsa-miR-625-3p 0 0 1
chr2:177243233|177243445 hsa-miR-634 0 0 1
chr2:177243233|177243445 hsa-miR-765 0 0 1
chr2:177243233|177243445 hsa-miR-298 0 0 1
chr2:177243233|177243445 hsa-miR-939-5p 0 0 1
chr2:177243233|177243445 hsa-miR-939-3p 0 0 1
chr2:177243233|177243445 hsa-miR-1226-5p 0 0 1
chr2:177243233|177243445 hsa-miR-1226-3p 0 0 1
chr2:177243233|177243445 hsa-miR-548j-5p 0 0 1
chr2:177243233|177243445 hsa-miR-548j-3p 0 0 1
chr2:177243233|177243445 hsa-miR-1287-5p 0 0 1
chr2:177243233|177243445 hsa-miR-1287-3p 0 0 1
chr2:177243233|177243445 hsa-miR-548k 0 0 1
chr2:177243233|177243445 hsa-miR-548l 0 0 1
chr2:177243233|177243445 hsa-miR-1255a 0 0 1
chr2:177243233|177243445 hsa-miR-1257 0 1 1
chr2:177243233|177243445 hsa-miR-1270 0 0 1
chr2:177243233|177243445 hsa-miR-1275 0 0 1
chr2:177243233|177243445 hsa-miR-502-5p 0 0 1
chr2:177243233|177243445 hsa-miR-338-3p 0 1 1
chr2:177243233|177243445 hsa-miR-320b 0 0 1
chr2:177243233|177243445 hsa-miR-320c 0 0 1
chr2:177243233|177243445 hsa-miR-320d 0 0 1
chr2:177243233|177243445 hsa-miR-455-3p 0 1 1
chr2:177243233|177243445 hsa-miR-548b-5p 0 0 1
chr2:177243233|177243445 hsa-miR-548d-5p 0 0 1
chr2:177243233|177243445 hsa-miR-548c-5p 0 0 1
chr2:177243233|177243445 hsa-miR-548a-5p 0 0 1
chr2:177243233|177243445 hsa-miR-548i 0 0 1
chr2:177243233|177243445 hsa-miR-1255b 0 0 1
chr2:177243233|177243445 hsa-miR-1308 0 0 1
chr2:177243233|177243445 hsa-miR-768-5p 0 0 1
chr2:177243233|177243445 hsa-miR-147 0 0 1
chr2:177243233|177243445 hsa-miR-548h 0 0 1
chr2:177243233|177243445 hsa-miR-4450 1 0 0
chr2:177243233|177243445 hsa-miR-4518 0 1 0
chr2:177243233|177243445 hsa-miR-4748 0 1 0
chr2:177243233|177243445 hsa-miR-5698 1 0 0
chr2:177243233|177243445 hsa-miR-6134 1 0 0
chr2:177243233|177243445 hsa-miR-12114 0 1 0
chr2:177243233|177243445 hsa-miR-3150a-3p 0 1 0
chr2:177243233|177243445 hsa-miR-6825-5p 1 0 0
chr2:177243233|177243445 hsa-miR-6894-5p 0 1 0
chr2:177243233|177243445 hsa-miR-7114-5p 1 0 0
chr2:177243233|177243445 hsa-miR-6796-5p 1 0 0
chr2:177243233|177243445 hsa-miR-6765-3p 0 1 0
chr2:177243233|177243445 hsa-miR-7109-5p 1 0 0
chr2:177243233|177243445 hsa-miR-619-3p 1 1 0
chr2:177243233|177243445 hsa-miR-3162-5p 1 0 0
chr2:177243233|177243445 hsa-miR-4796-3p 0 1 0
chr2:177243233|177243445 hsa-miR-6841-5p 0 1 0
chr2:177243233|177243445 hsa-miR-1343-5p 1 0 0
chr2:177243233|177243445 hsa-miR-6752-5p 1 0 0
chr2:177243233|177243445 hsa-miR-6803-5p 1 0 0
chr2:177243233|177243445 hsa-miR-6763-5p 1 0 0
chr2:177243233|177243445 hsa-miR-328-5p 1 0 0
chr2:177243233|177243445 hsa-miR-6777-5p 1 0 0
chr2:177243233|177243445 hsa-miR-6794-5p 1 0 0
chr2:177243233|177243445 hsa-miR-6795-5p 1 0 0
chr2:177243233|177243445 hsa-miR-6846-5p 1 0 0
chr2:177243233|177243445 hsa-miR-6889-5p 1 0 0
chr2:177243233|177243445 hsa-miR-6885-5p 1 0 0
chr2:177243233|177243445 hsa-miR-365a-5p 1 1 0
chr2:177243233|177243445 hsa-miR-365b-5p 1 1 0
chr2:177243233|177243445 hsa-miR-6855-5p 1 0 0
chr2:177243233|177243445 hsa-miR-6839-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr2:177243233|177243445
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MRSNSFAAHAGVPSSSKEVPHEGGHTQSSTFTP
Nucleotide Sequence TTGAGGTCAAACAGCTTTGCTGCCCATGCTGGTGTACCCTCATCCTCCAAGGAAGTCCCCCATGAGGGTGGGCACACACAATCCAGCACATTCACACCGTAA

CircID chr2:177243233|177243445
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MLPMLVYPHPPRKSPMRVGTHNPAHSHRKASTDTSATSKLPK
Nucleotide Sequence TTGCTGCCCATGCTGGTGTACCCTCATCCTCCAAGGAAGTCCCCCATGAGGGTGGGCACACACAATCCAGCACATTCACACCGTAAGGCTTCTACAGATACTTCTGCCACTTCTAAACTCCCCAAGTGA

CircID chr2:177243233|177243445
ORF Type ORF3
Protein Length 33
Nucleotide Length 102
Protein Sequence MGSLEVAEVSVEALRCECAGLCVPTLMGDFLGG
Nucleotide Sequence TTGGGGAGTTTAGAAGTGGCAGAAGTATCTGTAGAAGCCTTACGGTGTGAATGTGCTGGATTGTGTGTGCCCACCCTCATGGGGGACTTCCTTGGAGGATGA

CircID chr2:177243233|177243445
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MDCVCPPSWGTSLEDEGTPAWAAKLFDLKVEI
Nucleotide Sequence CTGGATTGTGTGTGCCCACCCTCATGGGGGACTTCCTTGGAGGATGAGGGTACACCAGCATGGGCAGCAAAGCTGTTTGACCTCAAGGTGGAGATCTGA

CircID chr2:177243233|177243445
ORF Type ORF5
Protein Length 43
Nucleotide Length 132
Protein Sequence MCWIVCAHPHGGLPWRMRVHQHGQQSCLTSRWRSEPPGQSMPS
Nucleotide Sequence ATGTGCTGGATTGTGTGTGCCCACCCTCATGGGGGACTTCCTTGGAGGATGAGGGTACACCAGCATGGGCAGCAAAGCTGTTTGACCTCAAGGTGGAGATCTGAGCCACCTGGTCAGTCCATGCCCAGTTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites