CircRNA Information

General Information
circRNA Basic Information
CircID chr2:17917680|17917851
Strand +
CircType exon
Host Gene ENSG00000170745.10;
Algorism CIRI2;
Sequence ACGCTCTGCCTTCATCCTGCCCGGTGGGACGTCCATCATCATCCAAGAAGCTCTGCCCTTCTCAGCACACTGGAATGTGTGGTGCACATAGGCATTTGGTGGCCAAAAAGAAGGGAAGAATCCTGTTCTCTGGTTGTACAGGCCAAAGCAATCACTGGAAAATCACTCTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:17917680|17917851 hsa-miR-204-5p 0 0 1
chr2:17917680|17917851 hsa-miR-204-3p 0 0 1
chr2:17917680|17917851 hsa-miR-211-5p 0 0 1
chr2:17917680|17917851 hsa-miR-211-3p 0 0 1
chr2:17917680|17917851 hsa-miR-432-5p 0 0 1
chr2:17917680|17917851 hsa-miR-432-3p 0 0 1
chr2:17917680|17917851 hsa-miR-588 0 0 1
chr2:17917680|17917851 hsa-miR-623 0 0 1
chr2:17917680|17917851 hsa-miR-648 0 1 1
chr2:17917680|17917851 hsa-miR-1248 0 0 1
chr2:17917680|17917851 hsa-miR-1253 0 0 1
chr2:17917680|17917851 hsa-miR-1255a 0 0 1
chr2:17917680|17917851 hsa-miR-1272 0 1 1
chr2:17917680|17917851 hsa-miR-1825 0 0 1
chr2:17917680|17917851 hsa-miR-486-5p 0 0 1
chr2:17917680|17917851 hsa-miR-145-5p 0 0 1
chr2:17917680|17917851 hsa-miR-767-5p 0 0 1
chr2:17917680|17917851 hsa-miR-199a-5p 0 0 1
chr2:17917680|17917851 hsa-miR-1224-3p 0 0 1
chr2:17917680|17917851 hsa-miR-455-5p 0 0 1
chr2:17917680|17917851 hsa-miR-199b-5p 0 0 1
chr2:17917680|17917851 hsa-miR-105 0 0 1
chr2:17917680|17917851 hsa-miR-1260 0 0 1
chr2:17917680|17917851 hsa-miR-1280 0 0 1
chr2:17917680|17917851 hsa-miR-1255b 0 0 1
chr2:17917680|17917851 hsa-miR-1300 0 0 1
chr2:17917680|17917851 hsa-miR-612 1 0 0
chr2:17917680|17917851 hsa-miR-622 1 0 0
chr2:17917680|17917851 hsa-miR-762 1 0 0
chr2:17917680|17917851 hsa-miR-3132 1 0 0
chr2:17917680|17917851 hsa-miR-3141 1 0 0
chr2:17917680|17917851 hsa-miR-3154 1 0 0
chr2:17917680|17917851 hsa-miR-3174 1 0 0
chr2:17917680|17917851 hsa-miR-3919 0 1 0
chr2:17917680|17917851 hsa-miR-4516 1 0 0
chr2:17917680|17917851 hsa-miR-4656 1 0 0
chr2:17917680|17917851 hsa-miR-4688 1 0 0
chr2:17917680|17917851 hsa-miR-5090 1 0 0
chr2:17917680|17917851 hsa-miR-5192 1 0 0
chr2:17917680|17917851 hsa-miR-6126 0 1 0
chr2:17917680|17917851 hsa-miR-6860 1 0 0
chr2:17917680|17917851 hsa-miR-219a-1-3p 1 0 0
chr2:17917680|17917851 hsa-miR-3663-3p 1 0 0
chr2:17917680|17917851 hsa-miR-6820-5p 1 0 0
chr2:17917680|17917851 hsa-miR-6721-5p 1 1 0
chr2:17917680|17917851 hsa-miR-4655-5p 1 0 0
chr2:17917680|17917851 hsa-miR-197-5p 1 0 0
chr2:17917680|17917851 hsa-let-7c-3p 0 1 0
chr2:17917680|17917851 hsa-miR-942-5p 0 1 0
chr2:17917680|17917851 hsa-miR-6770-5p 1 1 0
chr2:17917680|17917851 hsa-miR-1226-5p 1 0 0
chr2:17917680|17917851 hsa-miR-4693-3p 1 1 0
chr2:17917680|17917851 hsa-miR-3202 1 0 0
chr2:17917680|17917851 hsa-miR-149-3p 1 0 0
chr2:17917680|17917851 hsa-miR-6781-5p 1 0 0
chr2:17917680|17917851 hsa-miR-7112-5p 1 1 0
chr2:17917680|17917851 hsa-miR-423-5p 1 0 0
chr2:17917680|17917851 hsa-miR-3158-3p 1 0 0
chr2:17917680|17917851 hsa-miR-5088-3p 0 1 0
chr2:17917680|17917851 hsa-miR-181d-3p 0 1 0
chr2:17917680|17917851 hsa-miR-1207-5p 1 0 0
chr2:17917680|17917851 hsa-miR-4763-3p 1 0 0
chr2:17917680|17917851 hsa-miR-5001-5p 1 0 0
chr2:17917680|17917851 hsa-miR-6743-5p 1 0 0
chr2:17917680|17917851 hsa-miR-6780a-5p 1 0 0
chr2:17917680|17917851 hsa-miR-6797-5p 1 0 0
chr2:17917680|17917851 hsa-miR-6808-5p 1 0 0
chr2:17917680|17917851 hsa-miR-6879-5p 1 1 0
chr2:17917680|17917851 hsa-miR-3620-5p 1 0 0
chr2:17917680|17917851 hsa-miR-5196-5p 1 0 0
chr2:17917680|17917851 hsa-miR-4632-5p 1 1 0
chr2:17917680|17917851 hsa-miR-4725-3p 1 0 0
chr2:17917680|17917851 hsa-miR-4745-5p 1 0 0
chr2:17917680|17917851 hsa-miR-6735-5p 1 1 0
chr2:17917680|17917851 hsa-miR-6858-5p 1 0 0
chr2:17917680|17917851 hsa-miR-3187-5p 1 0 0
chr2:17917680|17917851 hsa-miR-4436b-3p 1 1 0
chr2:17917680|17917851 hsa-miR-6831-5p 1 0 0
chr2:17917680|17917851 hsa-miR-6758-5p 1 0 0
chr2:17917680|17917851 hsa-miR-7843-5p 1 1 0
chr2:17917680|17917851 hsa-miR-4646-5p 1 0 0
chr2:17917680|17917851 hsa-miR-6785-5p 1 0 0
chr2:17917680|17917851 hsa-miR-7107-3p 1 0 0
chr2:17917680|17917851 hsa-miR-4701-5p 0 1 0
chr2:17917680|17917851 hsa-miR-5195-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:17917680|17917851
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MECVVHIGIWWPKRREESCSLVVQAKAITGKSLS
Nucleotide Sequence CTGGAATGTGTGGTGCACATAGGCATTTGGTGGCCAAAAAGAAGGGAAGAATCCTGTTCTCTGGTTGTACAGGCCAAAGCAATCACTGGAAAATCACTCTCA
CircID chr2:17917680|17917851
ORF Type ORF2
Protein Length 55
Nucleotide Length 165
Protein Sequence MPSSCPVGRPSSSKKLCPSQHTGMCGAHRHLVAKKKGRILFSGCTGQSNHWKITL
Nucleotide Sequence CTGCCTTCATCCTGCCCGGTGGGACGTCCATCATCATCCAAGAAGCTCTGCCCTTCTCAGCACACTGGAATGTGTGGTGCACATAGGCATTTGGTGGCCAAAAAGAAGGGAAGAATCCTGTTCTCTGGTTGTACAGGCCAAAGCAATCACTGGAAAATCACTCTC
CircID chr2:17917680|17917851
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MLWPVQPENRILPFFLATKCLCAPHIPVC
Nucleotide Sequence TTGCTTTGGCCTGTACAACCAGAGAACAGGATTCTTCCCTTCTTTTTGGCCACCAAATGCCTATGTGCACCACACATTCCAGTGTGCTGA
CircID chr2:17917680|17917851
ORF Type ORF4
Protein Length 47
Nucleotide Length 141
Protein Sequence MYNQRTGFFPSFWPPNAYVHHTFQCAEKGRASWMMMDVPPGRMKAER
Nucleotide Sequence CTGTACAACCAGAGAACAGGATTCTTCCCTTCTTTTTGGCCACCAAATGCCTATGTGCACCACACATTCCAGTGTGCTGAGAAGGGCAGAGCTTCTTGGATGATGATGGACGTCCCACCGGGCAGGATGAAGGCAGAGCGT
CircID chr2:17917680|17917851
ORF Type ORF5
Protein Length 35
Nucleotide Length 108
Protein Sequence MACTTREQDSSLLFGHQMPMCTTHSSVLRRAELLG
Nucleotide Sequence TTGGCCTGTACAACCAGAGAACAGGATTCTTCCCTTCTTTTTGGCCACCAAATGCCTATGTGCACCACACATTCCAGTGTGCTGAGAAGGGCAGAGCTTCTTGGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab