CircRNA Information

General Information
circRNA Basic Information
CircID chr2:189010657|189010803
Strand -
CircType exon
Host Gene ENSG00000168542.11;
Algorism CIRI2;
Sequence GGCAATCCTGAACTTCCTGAAGATGTCCTTGATGTGCATCTGGCATTCCTTCGACTTCTCTCCAGCCGAGCTTCCCAGAACATCACATATCACTGCAAAAATAGCATTGCATACATGGATCAGGCCAGTGGAAATGTAAAGAAGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:189010657|189010803 hsa-miR-185-5p 0 0 1
chr2:189010657|189010803 hsa-miR-185-3p 0 0 1
chr2:189010657|189010803 hsa-miR-193b-5p 0 0 1
chr2:189010657|189010803 hsa-miR-193b-3p 0 0 1
chr2:189010657|189010803 hsa-miR-507 0 0 1
chr2:189010657|189010803 hsa-miR-557 0 0 1
chr2:189010657|189010803 hsa-miR-640 0 0 1
chr2:189010657|189010803 hsa-miR-190b-5p 0 0 1
chr2:189010657|189010803 hsa-miR-190b-3p 0 0 1
chr2:189010657|189010803 hsa-miR-873-5p 0 0 1
chr2:189010657|189010803 hsa-miR-873-3p 0 0 1
chr2:189010657|189010803 hsa-miR-1248 0 1 1
chr2:189010657|189010803 hsa-miR-1252-5p 0 0 1
chr2:189010657|189010803 hsa-miR-1252-3p 0 0 1
chr2:189010657|189010803 hsa-miR-129-5p 0 0 1
chr2:189010657|189010803 hsa-miR-193a-3p 0 0 1
chr2:189010657|189010803 hsa-miR-450b-5p 0 0 1
chr2:189010657|189010803 hsa-miR-1201 0 0 1
chr2:189010657|189010803 hsa-miR-190 0 0 1
chr2:189010657|189010803 hsa-miR-448 0 1 0
chr2:189010657|189010803 hsa-miR-3652 1 0 0
chr2:189010657|189010803 hsa-miR-4430 1 1 0
chr2:189010657|189010803 hsa-miR-3135b 0 1 0
chr2:189010657|189010803 hsa-miR-3689e 0 1 0
chr2:189010657|189010803 hsa-miR-3689f 0 1 0
chr2:189010657|189010803 hsa-miR-4505 1 0 0
chr2:189010657|189010803 hsa-miR-5787 1 0 0
chr2:189010657|189010803 hsa-miR-671-5p 1 0 0
chr2:189010657|189010803 hsa-miR-6796-5p 1 0 0
chr2:189010657|189010803 hsa-miR-6740-5p 1 0 0
chr2:189010657|189010803 hsa-miR-6516-5p 0 1 0
chr2:189010657|189010803 hsa-miR-1307-3p 1 0 0
chr2:189010657|189010803 hsa-miR-4638-5p 0 1 0
chr2:189010657|189010803 hsa-miR-1273h-5p 1 0 0
chr2:189010657|189010803 hsa-miR-6787-5p 1 0 0
chr2:189010657|189010803 hsa-miR-6812-5p 1 0 0
chr2:189010657|189010803 hsa-miR-1343-5p 1 0 0
chr2:189010657|189010803 hsa-miR-5001-5p 1 0 0
chr2:189010657|189010803 hsa-miR-6754-5p 1 0 0
chr2:189010657|189010803 hsa-miR-6756-5p 1 0 0
chr2:189010657|189010803 hsa-miR-6763-5p 1 0 0
chr2:189010657|189010803 hsa-miR-6779-5p 1 0 0
chr2:189010657|189010803 hsa-miR-6780a-5p 1 0 0
chr2:189010657|189010803 hsa-miR-3187-5p 1 0 0
chr2:189010657|189010803 hsa-miR-939-5p 1 0 0
chr2:189010657|189010803 hsa-miR-4646-5p 1 1 0
chr2:189010657|189010803 hsa-miR-4667-5p 1 0 0
chr2:189010657|189010803 hsa-miR-103a-1-5p 0 1 0
chr2:189010657|189010803 hsa-miR-3689a-5p 0 1 0
chr2:189010657|189010803 hsa-miR-3689b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr2:189010657|189010803
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MAFLRLLSSRASQNITYHCKNSIAYMDQASGNVKKA
Nucleotide Sequence CTGGCATTCCTTCGACTTCTCTCCAGCCGAGCTTCCCAGAACATCACATATCACTGCAAAAATAGCATTGCATACATGGATCAGGCCAGTGGAAATGTAAAGAAGGCC

CircID chr2:189010657|189010803
ORF Type ORF2
Protein Length 43
Nucleotide Length 132
Protein Sequence MNFLKMSLMCIWHSFDFSPAELPRTSHITAKIALHTWIRPVEM
Nucleotide Sequence CTGAACTTCCTGAAGATGTCCTTGATGTGCATCTGGCATTCCTTCGACTTCTCTCCAGCCGAGCTTCCCAGAACATCACATATCACTGCAAAAATAGCATTGCATACATGGATCAGGCCAGTGGAAATGTAA

CircID chr2:189010657|189010803
ORF Type ORF3
Protein Length 41
Nucleotide Length 123
Protein Sequence MIHVCNAIFAVICDVLGSSAGEKSKECQMHIKDIFRKFRIA
Nucleotide Sequence CTGATCCATGTATGCAATGCTATTTTTGCAGTGATATGTGATGTTCTGGGAAGCTCGGCTGGAGAGAAGTCGAAGGAATGCCAGATGCACATCAAGGACATCTTCAGGAAGTTCAGGATTGCC

CircID chr2:189010657|189010803
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MFWEARLERSRRNARCTSRTSSGSSGL
Nucleotide Sequence ATGTTCTGGGAAGCTCGGCTGGAGAGAAGTCGAAGGAATGCCAGATGCACATCAAGGACATCTTCAGGAAGTTCAGGATTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites