CircRNA Information

General Information
circRNA Basic Information
CircID chr2:190210721|190210918
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence GGCCTCTTTGTGGTCCCTAGCACAGGCAGTCATGCTCCAGCCTCACAGCTTTGTTCTTGCAGTTCCCACTGCCTGGGATGCTCTTCCTCTAGATAATGGCATGGGCTCACTTCCTTACTTCTTTCAGGAATTCACTCAAAGAACATCTCAGTGAGGCCTTCTCTGGTCATCCCATCTACAATTCATCCCCCTGTTACT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:190210721|190210918 hsa-miR-34a-5p 0 0 1
chr2:190210721|190210918 hsa-miR-34a-3p 0 0 1
chr2:190210721|190210918 hsa-miR-143-5p 0 0 1
chr2:190210721|190210918 hsa-miR-143-3p 0 0 1
chr2:190210721|190210918 hsa-miR-320a-5p 0 0 1
chr2:190210721|190210918 hsa-miR-320a-3p 0 0 1
chr2:190210721|190210918 hsa-miR-449a 0 0 1
chr2:190210721|190210918 hsa-miR-583 0 0 1
chr2:190210721|190210918 hsa-miR-449b-5p 0 0 1
chr2:190210721|190210918 hsa-miR-449b-3p 0 0 1
chr2:190210721|190210918 hsa-miR-802 0 0 1
chr2:190210721|190210918 hsa-miR-877-5p 0 0 1
chr2:190210721|190210918 hsa-miR-877-3p 0 0 1
chr2:190210721|190210918 hsa-miR-1200 0 0 1
chr2:190210721|190210918 hsa-miR-1294 1 1 1
chr2:190210721|190210918 hsa-miR-1292-5p 0 0 1
chr2:190210721|190210918 hsa-miR-1292-3p 0 0 1
chr2:190210721|190210918 hsa-miR-1225-3p 1 0 1
chr2:190210721|190210918 hsa-miR-485-5p 0 1 1
chr2:190210721|190210918 hsa-miR-324-5p 0 1 1
chr2:190210721|190210918 hsa-miR-518d-5p 0 1 1
chr2:190210721|190210918 hsa-miR-519b-5p 0 1 1
chr2:190210721|190210918 hsa-miR-519c-5p 0 1 1
chr2:190210721|190210918 hsa-miR-520c-5p 0 1 1
chr2:190210721|190210918 hsa-miR-320b 0 1 1
chr2:190210721|190210918 hsa-miR-320c 0 1 1
chr2:190210721|190210918 hsa-miR-320d 0 1 1
chr2:190210721|190210918 hsa-miR-34c-5p 0 0 1
chr2:190210721|190210918 hsa-miR-1233 0 0 1
chr2:190210721|190210918 hsa-miR-219-2-3p 0 0 1
chr2:190210721|190210918 hsa-miR-526a 0 0 1
chr2:190210721|190210918 hsa-miR-194 0 0 1
chr2:190210721|190210918 hsa-miR-762 1 0 0
chr2:190210721|190210918 hsa-miR-1262 0 1 0
chr2:190210721|190210918 hsa-miR-3154 1 0 0
chr2:190210721|190210918 hsa-miR-4271 1 0 0
chr2:190210721|190210918 hsa-miR-3652 0 1 0
chr2:190210721|190210918 hsa-miR-3911 1 0 0
chr2:190210721|190210918 hsa-miR-3916 0 1 0
chr2:190210721|190210918 hsa-miR-4429 0 1 0
chr2:190210721|190210918 hsa-miR-3135b 0 1 0
chr2:190210721|190210918 hsa-miR-4521 1 0 0
chr2:190210721|190210918 hsa-miR-4525 1 0 0
chr2:190210721|190210918 hsa-miR-4641 1 1 0
chr2:190210721|190210918 hsa-miR-4658 1 0 0
chr2:190210721|190210918 hsa-miR-4673 0 1 0
chr2:190210721|190210918 hsa-miR-4682 1 0 0
chr2:190210721|190210918 hsa-miR-4692 0 1 0
chr2:190210721|190210918 hsa-miR-4739 1 0 0
chr2:190210721|190210918 hsa-miR-5787 1 0 0
chr2:190210721|190210918 hsa-miR-6077 0 1 0
chr2:190210721|190210918 hsa-miR-6081 1 0 0
chr2:190210721|190210918 hsa-miR-6085 1 0 0
chr2:190210721|190210918 hsa-miR-8052 1 0 0
chr2:190210721|190210918 hsa-miR-8059 1 1 0
chr2:190210721|190210918 hsa-miR-12120 1 0 0
chr2:190210721|190210918 hsa-miR-211-3p 0 1 0
chr2:190210721|190210918 hsa-miR-134-5p 1 0 0
chr2:190210721|190210918 hsa-miR-4731-5p 0 1 0
chr2:190210721|190210918 hsa-miR-6894-5p 1 0 0
chr2:190210721|190210918 hsa-miR-1233-3p 1 0 0
chr2:190210721|190210918 hsa-miR-6799-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6510-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6728-5p 0 1 0
chr2:190210721|190210918 hsa-miR-5187-5p 0 1 0
chr2:190210721|190210918 hsa-miR-6089 1 0 0
chr2:190210721|190210918 hsa-miR-6744-5p 1 1 0
chr2:190210721|190210918 hsa-miR-197-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6796-5p 1 1 0
chr2:190210721|190210918 hsa-miR-6732-5p 1 0 0
chr2:190210721|190210918 hsa-miR-3190-3p 1 0 0
chr2:190210721|190210918 hsa-miR-6805-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6798-5p 1 1 0
chr2:190210721|190210918 hsa-miR-6770-5p 0 1 0
chr2:190210721|190210918 hsa-miR-1247-5p 1 0 0
chr2:190210721|190210918 hsa-miR-4690-5p 1 0 0
chr2:190210721|190210918 hsa-miR-2276-3p 0 1 0
chr2:190210721|190210918 hsa-miR-194-3p 0 1 0
chr2:190210721|190210918 hsa-miR-5010-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6811-3p 0 1 0
chr2:190210721|190210918 hsa-miR-1914-5p 0 1 0
chr2:190210721|190210918 hsa-miR-4766-5p 0 1 0
chr2:190210721|190210918 hsa-miR-520g-5p 0 1 0
chr2:190210721|190210918 hsa-miR-5002-3p 0 1 0
chr2:190210721|190210918 hsa-miR-4763-3p 1 0 0
chr2:190210721|190210918 hsa-miR-6769b-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6787-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6812-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6870-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6775-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6752-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6803-5p 1 0 0
chr2:190210721|190210918 hsa-miR-7110-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6722-3p 1 0 0
chr2:190210721|190210918 hsa-miR-6751-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6797-5p 1 0 0
chr2:190210721|190210918 hsa-miR-7111-5p 1 0 0
chr2:190210721|190210918 hsa-miR-3620-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6780b-5p 0 1 0
chr2:190210721|190210918 hsa-miR-10526-3p 1 0 0
chr2:190210721|190210918 hsa-miR-1909-3p 1 0 0
chr2:190210721|190210918 hsa-miR-449c-5p 1 1 0
chr2:190210721|190210918 hsa-miR-4726-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6794-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6795-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6846-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6848-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6858-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6887-5p 1 0 0
chr2:190210721|190210918 hsa-miR-4723-5p 1 0 0
chr2:190210721|190210918 hsa-miR-939-5p 1 0 0
chr2:190210721|190210918 hsa-miR-3199 1 0 0
chr2:190210721|190210918 hsa-miR-4769-5p 1 1 0
chr2:190210721|190210918 hsa-miR-6511b-5p 1 0 0
chr2:190210721|190210918 hsa-miR-3085-5p 1 0 0
chr2:190210721|190210918 hsa-miR-6773-5p 1 0 0
chr2:190210721|190210918 hsa-miR-4716-3p 1 1 0
chr2:190210721|190210918 hsa-miR-4667-5p 0 1 0
chr2:190210721|190210918 hsa-miR-6724-5p 1 0 0
chr2:190210721|190210918 hsa-miR-550a-5p 1 0 0
chr2:190210721|190210918 hsa-miR-518e-5p 0 1 0
chr2:190210721|190210918 hsa-miR-518f-5p 0 1 0
chr2:190210721|190210918 hsa-miR-519a-5p 0 1 0
chr2:190210721|190210918 hsa-miR-522-5p 0 1 0
chr2:190210721|190210918 hsa-miR-523-5p 0 1 0
chr2:190210721|190210918 hsa-miR-526a-5p 0 1 0
chr2:190210721|190210918 hsa-miR-6859-5p 0 1 0
chr2:190210721|190210918 hsa-miR-6884-5p 0 1 0
chr2:190210721|190210918 hsa-miR-2682-5p 0 1 0
chr2:190210721|190210918 hsa-miR-7157-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr2:190210721|190210918
ORF Type ORF1
Protein Length 48
Nucleotide Length 147
Protein Sequence MWSLAQAVMLQPHSFVLAVPTAWDALPLDNGMGSLPYFFQEFTQRTSQ
Nucleotide Sequence TTGTGGTCCCTAGCACAGGCAGTCATGCTCCAGCCTCACAGCTTTGTTCTTGCAGTTCCCACTGCCTGGGATGCTCTTCCTCTAGATAATGGCATGGGCTCACTTCCTTACTTCTTTCAGGAATTCACTCAAAGAACATCTCAGTGA

CircID chr2:190210721|190210918
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MAWAHFLTSFRNSLKEHLSEAFSGHPIYNSSPCY
Nucleotide Sequence ATGGCATGGGCTCACTTCCTTACTTCTTTCAGGAATTCACTCAAAGAACATCTCAGTGAGGCCTTCTCTGGTCATCCCATCTACAATTCATCCCCCTGTTAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites