CircRNA Information

General Information
circRNA Basic Information
CircID chr2:190500027|190500163
Strand +
CircType exon
Host Gene ENSG00000151690.13;
Algorism CIRI2;
Sequence GGGTCCACACTGGGGTGAGCGGGGCTGGTCTGCGTCTGAGATGCTGCTGCGTCAGGGGATGGCTGGTTTCTAGATGGGTCAGAGTGAGTCTCACATGGGACAGGCTGGGCTCTACCAGCAGGAGAATTTTCCCTATT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:190500027|190500163 hsa-miR-15a-5p 0 0 1
chr2:190500027|190500163 hsa-miR-15a-3p 0 0 1
chr2:190500027|190500163 hsa-miR-107 0 0 1
chr2:190500027|190500163 hsa-miR-15b-5p 0 0 1
chr2:190500027|190500163 hsa-miR-15b-3p 0 0 1
chr2:190500027|190500163 hsa-miR-195-5p 0 0 1
chr2:190500027|190500163 hsa-miR-195-3p 0 0 1
chr2:190500027|190500163 hsa-miR-370-5p 0 0 1
chr2:190500027|190500163 hsa-miR-370-3p 0 0 1
chr2:190500027|190500163 hsa-miR-379-5p 0 0 1
chr2:190500027|190500163 hsa-miR-379-3p 0 0 1
chr2:190500027|190500163 hsa-miR-424-5p 0 0 1
chr2:190500027|190500163 hsa-miR-424-3p 0 0 1
chr2:190500027|190500163 hsa-miR-497-5p 0 0 1
chr2:190500027|190500163 hsa-miR-497-3p 0 0 1
chr2:190500027|190500163 hsa-miR-199a-5p 0 0 1
chr2:190500027|190500163 hsa-miR-331-3p 0 0 1
chr2:190500027|190500163 hsa-miR-199b-5p 0 0 1
chr2:190500027|190500163 hsa-miR-103 0 0 1
chr2:190500027|190500163 hsa-miR-16 0 0 1
chr2:190500027|190500163 hsa-miR-138 0 0 1
chr2:190500027|190500163 hsa-miR-3166 1 0 0
chr2:190500027|190500163 hsa-miR-4269 1 0 0
chr2:190500027|190500163 hsa-miR-3672 0 1 0
chr2:190500027|190500163 hsa-miR-3911 0 1 0
chr2:190500027|190500163 hsa-miR-4451 0 1 0
chr2:190500027|190500163 hsa-miR-3972 1 0 0
chr2:190500027|190500163 hsa-miR-4665-3p 1 0 0
chr2:190500027|190500163 hsa-miR-3189-5p 1 0 0
chr2:190500027|190500163 hsa-miR-6849-3p 1 1 0
chr2:190500027|190500163 hsa-miR-4728-3p 1 0 0
chr2:190500027|190500163 hsa-miR-6858-3p 1 1 0
chr2:190500027|190500163 hsa-miR-1247-5p 1 0 0
chr2:190500027|190500163 hsa-miR-6757-3p 1 0 0
chr2:190500027|190500163 hsa-miR-6736-3p 0 1 0
chr2:190500027|190500163 hsa-miR-339-5p 1 0 0
chr2:190500027|190500163 hsa-miR-1226-3p 1 0 0
chr2:190500027|190500163 hsa-miR-3180-5p 1 0 0
chr2:190500027|190500163 hsa-miR-6794-3p 0 1 0
chr2:190500027|190500163 hsa-miR-6748-3p 0 1 0
chr2:190500027|190500163 hsa-miR-4750-3p 1 0 0
chr2:190500027|190500163 hsa-miR-4714-5p 0 1 0
chr2:190500027|190500163 hsa-miR-6784-3p 0 1 0
chr2:190500027|190500163 hsa-miR-6862-3p 0 1 0
chr2:190500027|190500163 hsa-miR-6810-3p 1 0 0
chr2:190500027|190500163 hsa-miR-10392-3p 1 0 0
chr2:190500027|190500163 hsa-miR-6864-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr2:190500027|190500163
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MRLRCCCVRGWLVSRWVRVSLTWDRLGSTSRRIFPI
Nucleotide Sequence CTGCGTCTGAGATGCTGCTGCGTCAGGGGATGGCTGGTTTCTAGATGGGTCAGAGTGAGTCTCACATGGGACAGGCTGGGCTCTACCAGCAGGAGAATTTTCCCTATT

CircID chr2:190500027|190500163
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MLVEPSLSHVRLTLTHLETSHPLTQQHLRRRPAPLTPVWT
Nucleotide Sequence CTGCTGGTAGAGCCCAGCCTGTCCCATGTGAGACTCACTCTGACCCATCTAGAAACCAGCCATCCCCTGACGCAGCAGCATCTCAGACGCAGACCAGCCCCGCTCACCCCAGTGTGGACC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites