CircRNA Information

General Information
circRNA Basic Information
CircID chr2:190880956|190881126
Strand -
CircType exon
Host Gene ENSG00000235852.1;
Algorism CIRI2;
Sequence ACCCAAGTAGCTGCCCTTTCCTCTTCTGTCATCTCACCGCCCCACCACAGACCGCGTTCCCCGAGGAAACCGGCCGCCCACGCCCGGAGCATCCTCCCCTGTTGAGCGGGCGCTGACGGACCCGGCGGCATGATGCGGCTGCGAGGCTCGGGGATGCTGCGGGACCTGCTC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:190880956|190881126 hsa-miR-107 0 0 1
chr2:190880956|190881126 hsa-miR-143-5p 0 0 1
chr2:190880956|190881126 hsa-miR-143-3p 0 0 1
chr2:190880956|190881126 hsa-miR-421 0 0 1
chr2:190880956|190881126 hsa-miR-890 0 0 1
chr2:190880956|190881126 hsa-miR-541-5p 0 0 1
chr2:190880956|190881126 hsa-miR-541-3p 0 0 1
chr2:190880956|190881126 hsa-miR-1238-5p 0 0 1
chr2:190880956|190881126 hsa-miR-1238-3p 0 0 1
chr2:190880956|190881126 hsa-miR-1292-5p 0 0 1
chr2:190880956|190881126 hsa-miR-1292-3p 0 0 1
chr2:190880956|190881126 hsa-miR-615-3p 0 1 1
chr2:190880956|190881126 hsa-miR-542-5p 0 0 1
chr2:190880956|190881126 hsa-miR-324-5p 0 1 1
chr2:190880956|190881126 hsa-miR-654-5p 0 0 1
chr2:190880956|190881126 hsa-miR-103 0 0 1
chr2:190880956|190881126 hsa-miR-1268 0 0 1
chr2:190880956|190881126 hsa-miR-572 1 0 0
chr2:190880956|190881126 hsa-miR-608 1 1 0
chr2:190880956|190881126 hsa-miR-638 1 0 0
chr2:190880956|190881126 hsa-miR-663a 1 0 0
chr2:190880956|190881126 hsa-miR-1202 1 0 0
chr2:190880956|190881126 hsa-miR-1268a 1 1 0
chr2:190880956|190881126 hsa-miR-1469 1 0 0
chr2:190880956|190881126 hsa-miR-2110 1 0 0
chr2:190880956|190881126 hsa-miR-3154 1 1 0
chr2:190880956|190881126 hsa-miR-3196 1 0 0
chr2:190880956|190881126 hsa-miR-4271 1 0 0
chr2:190880956|190881126 hsa-miR-3916 0 1 0
chr2:190880956|190881126 hsa-miR-1268b 1 1 0
chr2:190880956|190881126 hsa-miR-4440 1 0 0
chr2:190880956|190881126 hsa-miR-4487 1 0 0
chr2:190880956|190881126 hsa-miR-4488 1 0 0
chr2:190880956|190881126 hsa-miR-4651 1 0 0
chr2:190880956|190881126 hsa-miR-4675 1 0 0
chr2:190880956|190881126 hsa-miR-4689 1 0 0
chr2:190880956|190881126 hsa-miR-4706 1 0 0
chr2:190880956|190881126 hsa-miR-4739 1 0 0
chr2:190880956|190881126 hsa-miR-5572 1 0 0
chr2:190880956|190881126 hsa-miR-6076 1 0 0
chr2:190880956|190881126 hsa-miR-6088 1 1 0
chr2:190880956|190881126 hsa-miR-6090 1 0 0
chr2:190880956|190881126 hsa-miR-6124 1 0 0
chr2:190880956|190881126 hsa-miR-6134 1 0 0
chr2:190880956|190881126 hsa-miR-8072 1 0 0
chr2:190880956|190881126 hsa-miR-8089 1 0 0
chr2:190880956|190881126 hsa-miR-6765-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6825-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6894-5p 1 1 0
chr2:190880956|190881126 hsa-miR-6799-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6728-5p 1 0 0
chr2:190880956|190881126 hsa-miR-139-3p 1 0 0
chr2:190880956|190881126 hsa-miR-6089 1 0 0
chr2:190880956|190881126 hsa-miR-6744-5p 1 1 0
chr2:190880956|190881126 hsa-miR-6727-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6841-3p 0 1 0
chr2:190880956|190881126 hsa-miR-6742-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6716-5p 1 0 0
chr2:190880956|190881126 hsa-miR-3151-5p 1 1 0
chr2:190880956|190881126 hsa-miR-3180-3p 1 1 0
chr2:190880956|190881126 hsa-miR-6782-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6850-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6786-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6763-3p 1 0 0
chr2:190880956|190881126 hsa-miR-7854-3p 1 0 0
chr2:190880956|190881126 hsa-miR-6824-5p 1 1 0
chr2:190880956|190881126 hsa-miR-6789-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6800-5p 1 0 0
chr2:190880956|190881126 hsa-miR-3189-3p 1 0 0
chr2:190880956|190881126 hsa-miR-4750-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6792-5p 1 0 0
chr2:190880956|190881126 hsa-miR-1199-3p 0 1 0
chr2:190880956|190881126 hsa-miR-579-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6769b-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6778-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6812-5p 1 1 0
chr2:190880956|190881126 hsa-miR-6816-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6865-5p 0 1 0
chr2:190880956|190881126 hsa-miR-1343-5p 1 0 0
chr2:190880956|190881126 hsa-miR-3180 1 0 0
chr2:190880956|190881126 hsa-miR-6737-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6756-5p 1 1 0
chr2:190880956|190881126 hsa-miR-6769a-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6803-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6819-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6722-3p 1 0 0
chr2:190880956|190881126 hsa-miR-3620-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6780b-5p 1 0 0
chr2:190880956|190881126 hsa-miR-10396b-5p 1 0 0
chr2:190880956|190881126 hsa-miR-1237-5p 1 0 0
chr2:190880956|190881126 hsa-miR-1909-3p 1 0 0
chr2:190880956|190881126 hsa-miR-4632-5p 0 1 0
chr2:190880956|190881126 hsa-miR-4725-3p 1 0 0
chr2:190880956|190881126 hsa-miR-6729-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6777-5p 1 1 0
chr2:190880956|190881126 hsa-miR-6794-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6858-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6889-5p 1 0 0
chr2:190880956|190881126 hsa-miR-939-5p 1 0 0
chr2:190880956|190881126 hsa-miR-4769-5p 1 1 0
chr2:190880956|190881126 hsa-miR-10394-3p 1 0 0
chr2:190880956|190881126 hsa-miR-6511a-5p 1 0 0
chr2:190880956|190881126 hsa-miR-10396a-3p 1 0 0
chr2:190880956|190881126 hsa-miR-10396b-3p 1 0 0
chr2:190880956|190881126 hsa-miR-6731-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6785-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6724-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6791-5p 1 0 0
chr2:190880956|190881126 hsa-miR-6753-3p 0 1 0
chr2:190880956|190881126 hsa-miR-99b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr2:190880956|190881126
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MPFPLLSSHRPTTDRVPRGNRPPTPGASSPVERALTDPAA
Nucleotide Sequence CTGCCCTTTCCTCTTCTGTCATCTCACCGCCCCACCACAGACCGCGTTCCCCGAGGAAACCGGCCGCCCACGCCCGGAGCATCCTCCCCTGTTGAGCGGGCGCTGACGGACCCGGCGGCATGA
CircID chr2:190880956|190881126
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MPPGPSAPAQQGRMLRAWAAGFLGERGLWWGGEMTEEERAATW
Nucleotide Sequence ATGCCGCCGGGTCCGTCAGCGCCCGCTCAACAGGGGAGGATGCTCCGGGCGTGGGCGGCCGGTTTCCTCGGGGAACGCGGTCTGTGGTGGGGCGGTGAGATGACAGAAGAGGAAAGGGCAGCTACTTGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab