CircRNA Information

General Information
circRNA Basic Information
CircID chr2:200571524|200571768
Strand -
CircType exon
Host Gene ENSG00000163535.16;
Algorism CIRI2;
Sequence ATGGAATGAAAACTTTCAGAAAAGTGAAAGATTCCAGCTCTGAAAAAAAGAGAGAAAGATCAAAGAGACAGTTTAAAAATAGTTCAGATGTCGATATTGGGGAAAAGATTGAAAACAGGACAGAAAGATCTGATGTCCTGGATGGCAAAAGGGGTGCAGAAGATCCCGGTTTTATTTTCAATAATGAACAGCTGGCTCAGATGAATGAACAGCTGGCTCAGGTGAATGAACTAAAGAAAATGACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr2:200571524|200571768
ORF Type ORF1
Protein Length 54
Nucleotide Length 165
Protein Sequence MKKREKDQRDSLKIVQMSILGKRLKTGQKDLMSWMAKGVQKIPVLFSIMNSWLR
Nucleotide Sequence CTGAAAAAAAGAGAGAAAGATCAAAGAGACAGTTTAAAAATAGTTCAGATGTCGATATTGGGGAAAAGATTGAAAACAGGACAGAAAGATCTGATGTCCTGGATGGCAAAAGGGGTGCAGAAGATCCCGGTTTTATTTTCAATAATGAACAGCTGGCTCAGATGA

CircID chr2:200571524|200571768
ORF Type ORF2
Protein Length 80
Nucleotide Length 240
Protein Sequence MKTFRKVKDSSSEKKRERSKRQFKNSSDVDIGEKIENRTERSDVLDGKRGAEDPGFIFNNEQLAQMNEQLAQVNELKKMT
Nucleotide Sequence ATGAAAACTTTCAGAAAAGTGAAAGATTCCAGCTCTGAAAAAAAGAGAGAAAGATCAAAGAGACAGTTTAAAAATAGTTCAGATGTCGATATTGGGGAAAAGATTGAAAACAGGACAGAAAGATCTGATGTCCTGGATGGCAAAAGGGGTGCAGAAGATCCCGGTTTTATTTTCAATAATGAACAGCTGGCTCAGATGAATGAACAGCTGGCTCAGGTGAATGAACTAAAGAAAATGACC

CircID chr2:200571524|200571768
ORF Type ORF3
Protein Length 45
Nucleotide Length 138
Protein Sequence MSQLFIHLSQLFIIENKTGIFCTPFAIQDIRSFCPVFNLFPNIDI
Nucleotide Sequence CTGAGCCAGCTGTTCATTCATCTGAGCCAGCTGTTCATTATTGAAAATAAAACCGGGATCTTCTGCACCCCTTTTGCCATCCAGGACATCAGATCTTTCTGTCCTGTTTTCAATCTTTTCCCCAATATCGACATCTGA

CircID chr2:200571524|200571768
ORF Type ORF4
Protein Length 60
Nucleotide Length 180
Protein Sequence MKIKPGSSAPLLPSRTSDLSVLFSIFSPISTSELFLNCLFDLSLFFSELESFTFLKVFIP
Nucleotide Sequence TTGAAAATAAAACCGGGATCTTCTGCACCCCTTTTGCCATCCAGGACATCAGATCTTTCTGTCCTGTTTTCAATCTTTTCCCCAATATCGACATCTGAACTATTTTTAAACTGTCTCTTTGATCTTTCTCTCTTTTTTTCAGAGCTGGAATCTTTCACTTTTCTGAAAGTTTTCATTCCA

CircID chr2:200571524|200571768
ORF Type ORF5
Protein Length 28
Nucleotide Length 87
Protein Sequence MHPFCHPGHQIFLSCFQSFPQYRHLNYF
Nucleotide Sequence CTGCACCCCTTTTGCCATCCAGGACATCAGATCTTTCTGTCCTGTTTTCAATCTTTTCCCCAATATCGACATCTGAACTATTTTTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites