CircNet

General Information

circRNA Basic Information

CircID	chr2:200856682\|200856985
Strand	-
CircType	exon
Host Gene	ENSG00000013441.15;
Algorism	find_circ;CIRI2;DCC;
Sequence	TTTTGCACAGTAATAAGTTGACTCACACAGACTTAAAGCCTGAAAACATCTTATTTGTGCAGTCTGACTACACAGAGGCGTATAATCCCAAAATAGTAAGTCTTCCAAAATATTCATAAAGTATCTTATGCCTTAATAGCTTATGCCTTCTTAACCATCATTTATGATTTTCAGAAACGTGATGAACGCACCTTAATAAATCCAGATATTAAAGTTGTAGACTTTGGTAGTGCAACATATGATGACGAACATCACAGTACATTGGTATCTACAAGACATTATAGAGCACCTGAAGTTATTTTAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr2:200856682\|200856985	hsa-miR-27a-5p	0	0	1
chr2:200856682\|200856985	hsa-miR-27a-3p	0	0	1
chr2:200856682\|200856985	hsa-miR-27b-5p	0	0	1
chr2:200856682\|200856985	hsa-miR-27b-3p	0	0	1
chr2:200856682\|200856985	hsa-miR-130a-5p	0	0	1
chr2:200856682\|200856985	hsa-miR-130a-3p	0	0	1
chr2:200856682\|200856985	hsa-miR-301a-5p	0	0	1
chr2:200856682\|200856985	hsa-miR-301a-3p	0	0	1
chr2:200856682\|200856985	hsa-miR-130b-5p	0	0	1
chr2:200856682\|200856985	hsa-miR-130b-3p	0	0	1
chr2:200856682\|200856985	hsa-miR-377-5p	0	0	1
chr2:200856682\|200856985	hsa-miR-377-3p	0	0	1
chr2:200856682\|200856985	hsa-miR-382-5p	0	0	1
chr2:200856682\|200856985	hsa-miR-382-3p	0	0	1
chr2:200856682\|200856985	hsa-miR-345-5p	0	0	1
chr2:200856682\|200856985	hsa-miR-345-3p	0	0	1
chr2:200856682\|200856985	hsa-miR-507	0	0	1
chr2:200856682\|200856985	hsa-miR-557	0	0	1
chr2:200856682\|200856985	hsa-miR-561-5p	0	0	1
chr2:200856682\|200856985	hsa-miR-561-3p	0	0	1
chr2:200856682\|200856985	hsa-miR-570-5p	0	0	1
chr2:200856682\|200856985	hsa-miR-570-3p	0	0	1
chr2:200856682\|200856985	hsa-miR-605-5p	0	0	1
chr2:200856682\|200856985	hsa-miR-605-3p	0	0	1
chr2:200856682\|200856985	hsa-miR-622	0	0	1
chr2:200856682\|200856985	hsa-miR-641	1	1	1
chr2:200856682\|200856985	hsa-miR-454-5p	0	0	1
chr2:200856682\|200856985	hsa-miR-454-3p	0	0	1
chr2:200856682\|200856985	hsa-miR-301b-5p	0	0	1
chr2:200856682\|200856985	hsa-miR-301b-3p	0	0	1
chr2:200856682\|200856985	hsa-miR-1272	0	0	1
chr2:200856682\|200856985	hsa-miR-1322	0	0	1
chr2:200856682\|200856985	hsa-miR-9-5p	0	1	1
chr2:200856682\|200856985	hsa-miR-1283	0	0	1
chr2:200856682\|200856985	hsa-miR-342-3p	0	1	1
chr2:200856682\|200856985	hsa-miR-450b-5p	0	0	1
chr2:200856682\|200856985	hsa-miR-128	0	0	1
chr2:200856682\|200856985	hsa-miR-9	0	0	1
chr2:200856682\|200856985	hsa-miR-499-3p	0	0	1
chr2:200856682\|200856985	hsa-miR-101	0	0	1
chr2:200856682\|200856985	hsa-miR-3666	0	1	0
chr2:200856682\|200856985	hsa-miR-4517	0	1	0
chr2:200856682\|200856985	hsa-miR-424-3p	0	1	0
chr2:200856682\|200856985	hsa-miR-32-5p	0	1	0
chr2:200856682\|200856985	hsa-miR-499a-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:200856682\|200856985
ORF Type	ORF1
Protein Length	39
Nucleotide Length	117
Protein Sequence	MNILEDLLFWDYTPLCSQTAQIRCFQALSLCESTYYCAK
Nucleotide Sequence	ATGAATATTTTGGAAGACTTACTATTTTGGGATTATACGCCTCTGTGTAGTCAGACTGCACAAATAAGATGTTTTCAGGCTTTAAGTCTGTGTGAGTCAACTTATTACTGTGCAAAA

CircID	chr2:200856682\|200856985
ORF Type	ORF1
Protein Length	42
Nucleotide Length	126
Protein Sequence	MDLLRCVHHVLFWDYTPLCSQTAQIRCFQALSLCESTYYCAK
Nucleotide Sequence	CTGGATTTATTAAGGTGCGTTCATCACGTTTTATTTTGGGATTATACGCCTCTGTGTAGTCAGACTGCACAAATAAGATGTTTTCAGGCTTTAAGTCTGTGTGAGTCAACTTATTACTGTGCAAAA

CircID	chr2:200856682\|200856985
ORF Type	ORF2
Protein Length	28
Nucleotide Length	87
Protein Sequence	MSCRYQCTVMFVIICCTTKVYNFNIWIY
Nucleotide Sequence	ATGTCTTGTAGATACCAATGTACTGTGATGTTCGTCATCATATGTTGCACTACCAAAGTCTACAACTTTAATATCTGGATTTATTAA

CircID	chr2:200856682\|200856985
ORF Type	ORF3
Protein Length	26
Nucleotide Length	81
Protein Sequence	MVVQHMMTNITVHWYLQDIIEHLKLF
Nucleotide Sequence	TTGGTAGTGCAACATATGATGACGAACATCACAGTACATTGGTATCTACAAGACATTATAGAGCACCTGAAGTTATTTTAG

CircID	chr2:200856682\|200856985
ORF Type	ORF4
Protein Length	74
Nucleotide Length	222
Protein Sequence	LHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVIL
Nucleotide Sequence	TTGCACAGTAATAAGTTGACTCACACAGACTTAAAGCCTGAAAACATCTTATTTGTGCAGTCTGACTACACAGAGGCGTATAATCCCAAAATAAAACGTGATGAACGCACCTTAATAAATCCAGATATTAAAGTTGTAGACTTTGGTAGTGCAACATATGATGACGAACATCACAGTACATTGGTATCTACAAGACATTATAGAGCACCTGAAGTTATTTTA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr2:200856682\|200856985	RBM5	1	0	0
chr2:200856682\|200856985	KHSRP	4	4	0
chr2:200856682\|200856985	MOV10	1	0	0
chr2:200856682\|200856985	ELAVL1	6	4	1
chr2:200856682\|200856985	ELAVL3	1	0	0
chr2:200856682\|200856985	SF3B4	5	0	1
chr2:200856682\|200856985	FAM120A	2	1	0
chr2:200856682\|200856985	NOP56	1	0	0
chr2:200856682\|200856985	SRRM4	1	0	0
chr2:200856682\|200856985	PRPF8	10	5	1
chr2:200856682\|200856985	UPF1	3	0	0
chr2:200856682\|200856985	ATXN2	2	0	0
chr2:200856682\|200856985	TNRC6A	1	0	0
chr2:200856682\|200856985	FMR1	2	1	0
chr2:200856682\|200856985	CPSF6	2	0	0
chr2:200856682\|200856985	TIA1	3	0	1
chr2:200856682\|200856985	TROVE2	3	0	0
chr2:200856682\|200856985	FUS	2	1	0
chr2:200856682\|200856985	DGCR8	4	0	0
chr2:200856682\|200856985	CPSF7	3	0	0
chr2:200856682\|200856985	SRSF1	5	2	0
chr2:200856682\|200856985	NOP58	8	1	3
chr2:200856682\|200856985	SRSF3	1	0	0
chr2:200856682\|200856985	SRSF7	6	0	0
chr2:200856682\|200856985	U2AF1	3	2	0
chr2:200856682\|200856985	U2AF2	21	11	3
chr2:200856682\|200856985	SRSF9	5	0	0
chr2:200856682\|200856985	HNRNPU	2	0	0
chr2:200856682\|200856985	DDX54	5	1	5
chr2:200856682\|200856985	RBM10	8	2	0
chr2:200856682\|200856985	HNRNPA2B1	1	0	0
chr2:200856682\|200856985	SF3A3	4	0	2
chr2:200856682\|200856985	FIP1L1	1	0	0
chr2:200856682\|200856985	PTBP1	6	0	0
chr2:200856682\|200856985	HNRNPC	11	9	0
chr2:200856682\|200856985	TRA2A	4	0	0
chr2:200856682\|200856985	ZNF184	4	0	0
chr2:200856682\|200856985	VIM	0	1	0
chr2:200856682\|200856985	HNRNPA1	3	1	0
chr2:200856682\|200856985	XRN2	0	1	0
chr2:200856682\|200856985	WDR33	2	0	0
chr2:200856682\|200856985	SMNDC1	9	0	3
chr2:200856682\|200856985	MSI2	1	0	1
chr2:200856682\|200856985	ACIN1	1	0	0
chr2:200856682\|200856985	LIN28B	2	1	3
chr2:200856682\|200856985	RANGAP1	0	1	0
chr2:200856682\|200856985	FXR1	1	0	0
chr2:200856682\|200856985	FXR2	0	1	0
chr2:200856682\|200856985	SND1	1	0	0
chr2:200856682\|200856985	IGF2BP1	4	0	0
chr2:200856682\|200856985	IGF2BP3	4	1	0
chr2:200856682\|200856985	IGF2BP2	8	4	3
chr2:200856682\|200856985	TARDBP	5	7	1
chr2:200856682\|200856985	TAF15	3	0	0
chr2:200856682\|200856985	BUD13	7	0	1
chr2:200856682\|200856985	RBFOX2	3	0	0
chr2:200856682\|200856985	CNBP	1	0	0
chr2:200856682\|200856985	SLTM	1	4	0
chr2:200856682\|200856985	EIF4G2	3	0	0
chr2:200856682\|200856985	DDX42	0	1	0
chr2:200856682\|200856985	CSTF2T	5	1	1
chr2:200856682\|200856985	DHX9	1	1	0
chr2:200856682\|200856985	CSTF2	3	0	1
chr2:200856682\|200856985	NONO	1	0	0
chr2:200856682\|200856985	RBM22	3	2	2
chr2:200856682\|200856985	ILF3	0	5	0
chr2:200856682\|200856985	TIAL1	1	0	0
chr2:200856682\|200856985	DKC1	0	0	1
chr2:200856682\|200856985	ZC3H7B	0	1	0
chr2:200856682\|200856985	FBL	3	2	4
chr2:200856682\|200856985	AGO1	1	0	0
chr2:200856682\|200856985	EIF4A3	10	3	3
chr2:200856682\|200856985	AGO2	1	0	5

CircRNA Information