CircRNA Information

General Information
circRNA Basic Information
CircID chr2:201167299|201167435
Strand +
CircType exon
Host Gene ENSG00000003402.18;
Algorism CIRI2;
Sequence CTCTCTGGGCTCAGGGGATCCACTCACTTCAGCCTCCCAAGTAGCTGGGACTACAGGAACACGCCACCACGCTCAGCTAAATTTTGTCTTTTTTTGTAGAGATGGAGTCTTGCTATGTTGCCCAGGCTGGTCTCAAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:201167299|201167435 hsa-miR-573 0 1 1
chr2:201167299|201167435 hsa-miR-612 0 1 1
chr2:201167299|201167435 hsa-miR-661 0 0 1
chr2:201167299|201167435 hsa-miR-890 0 0 1
chr2:201167299|201167435 hsa-miR-486-5p 0 0 1
chr2:201167299|201167435 hsa-miR-1225-3p 0 0 1
chr2:201167299|201167435 hsa-miR-769-5p 1 0 1
chr2:201167299|201167435 hsa-miR-1283 0 0 1
chr2:201167299|201167435 hsa-miR-485-5p 0 1 1
chr2:201167299|201167435 hsa-miR-331-3p 0 0 1
chr2:201167299|201167435 hsa-miR-125a-5p 0 0 1
chr2:201167299|201167435 hsa-miR-1233 0 0 1
chr2:201167299|201167435 hsa-miR-125b 0 0 1
chr2:201167299|201167435 hsa-miR-1285 0 0 1
chr2:201167299|201167435 hsa-miR-1268a 1 1 0
chr2:201167299|201167435 hsa-miR-3929 1 1 0
chr2:201167299|201167435 hsa-miR-1268b 1 1 0
chr2:201167299|201167435 hsa-miR-4430 1 1 0
chr2:201167299|201167435 hsa-miR-4449 1 0 0
chr2:201167299|201167435 hsa-miR-4478 0 1 0
chr2:201167299|201167435 hsa-miR-3689c 1 1 0
chr2:201167299|201167435 hsa-miR-4656 1 0 0
chr2:201167299|201167435 hsa-miR-4658 1 0 0
chr2:201167299|201167435 hsa-miR-4663 1 1 0
chr2:201167299|201167435 hsa-miR-6861-5p 1 0 0
chr2:201167299|201167435 hsa-miR-6894-5p 1 0 0
chr2:201167299|201167435 hsa-miR-7851-3p 1 0 0
chr2:201167299|201167435 hsa-miR-4786-5p 0 1 0
chr2:201167299|201167435 hsa-miR-3192-5p 1 1 0
chr2:201167299|201167435 hsa-miR-127-3p 0 1 0
chr2:201167299|201167435 hsa-miR-6849-3p 0 1 0
chr2:201167299|201167435 hsa-miR-6742-5p 1 0 0
chr2:201167299|201167435 hsa-miR-6821-5p 1 0 0
chr2:201167299|201167435 hsa-miR-30b-3p 0 1 0
chr2:201167299|201167435 hsa-miR-615-5p 1 0 0
chr2:201167299|201167435 hsa-miR-7109-5p 1 0 0
chr2:201167299|201167435 hsa-miR-1228-5p 1 0 0
chr2:201167299|201167435 hsa-miR-6771-5p 1 0 0
chr2:201167299|201167435 hsa-miR-574-5p 1 0 0
chr2:201167299|201167435 hsa-miR-4708-3p 0 1 0
chr2:201167299|201167435 hsa-miR-20b-3p 0 1 0
chr2:201167299|201167435 hsa-miR-1233-5p 1 0 0
chr2:201167299|201167435 hsa-miR-3689b-3p 1 1 0
chr2:201167299|201167435 hsa-miR-6774-5p 1 0 0
chr2:201167299|201167435 hsa-miR-6779-5p 1 0 0
chr2:201167299|201167435 hsa-miR-6780a-5p 1 1 0
chr2:201167299|201167435 hsa-miR-328-5p 1 0 0
chr2:201167299|201167435 hsa-miR-3689a-3p 1 0 0
chr2:201167299|201167435 hsa-miR-4632-5p 1 0 0
chr2:201167299|201167435 hsa-miR-4649-5p 1 0 0
chr2:201167299|201167435 hsa-miR-4745-5p 1 0 0
chr2:201167299|201167435 hsa-miR-6846-5p 0 1 0
chr2:201167299|201167435 hsa-miR-6848-5p 1 0 0
chr2:201167299|201167435 hsa-miR-6883-5p 1 0 0
chr2:201167299|201167435 hsa-miR-3187-5p 0 1 0
chr2:201167299|201167435 hsa-miR-939-5p 1 0 0
chr2:201167299|201167435 hsa-miR-1238-5p 0 1 0
chr2:201167299|201167435 hsa-miR-4758-5p 0 1 0
chr2:201167299|201167435 hsa-miR-1285-3p 1 1 0
chr2:201167299|201167435 hsa-miR-1199-5p 0 1 0
chr2:201167299|201167435 hsa-miR-3116 1 0 0
chr2:201167299|201167435 hsa-miR-6790-5p 1 0 0
chr2:201167299|201167435 hsa-miR-4756-5p 1 0 0
chr2:201167299|201167435 hsa-miR-6884-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:201167299|201167435
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MGSGDPLTSASQVAGTTGTRHHAQLNFVFFCRDGVLLCCPGWSQ
Nucleotide Sequence CTGGGCTCAGGGGATCCACTCACTTCAGCCTCCCAAGTAGCTGGGACTACAGGAACACGCCACCACGCTCAGCTAAATTTTGTCTTTTTTTGTAGAGATGGAGTCTTGCTATGTTGCCCAGGCTGGTCTCAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab