CircNet

General Information

circRNA Basic Information

CircID	chr2:20200912\|20201138
Strand	-
CircType	exon
Host Gene	ENSG00000115884.9;
Algorism	CIRI2;
Sequence	CCCCGAGTCATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCGAATACCGGACACAGGTTCCCTTGGCTTGGTGGTGCATCTCTGATCCACAGACTGGCCCACCTCTCGGAGTGGCCAACGGAGTCGCTGAAACGTTGTCAAATAAGCAAGTAAGTGCAGGAGCCCTGGGCTGGGGGCCTCTGGCCTCTGCAGCCGGGTGGGAGGAGGATGTCCAAGGTGT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr2:20200912\|20201138	hsa-miR-122-5p	0	0	1
chr2:20200912\|20201138	hsa-miR-122-3p	0	0	1
chr2:20200912\|20201138	hsa-miR-383-5p	0	0	1
chr2:20200912\|20201138	hsa-miR-383-3p	0	0	1
chr2:20200912\|20201138	hsa-miR-588	0	0	1
chr2:20200912\|20201138	hsa-miR-622	0	0	1
chr2:20200912\|20201138	hsa-miR-649	0	0	1
chr2:20200912\|20201138	hsa-miR-661	1	0	1
chr2:20200912\|20201138	hsa-miR-541-5p	0	0	1
chr2:20200912\|20201138	hsa-miR-541-3p	0	0	1
chr2:20200912\|20201138	hsa-miR-1306-5p	0	0	1
chr2:20200912\|20201138	hsa-miR-1306-3p	0	0	1
chr2:20200912\|20201138	hsa-miR-532-3p	0	0	1
chr2:20200912\|20201138	hsa-miR-767-5p	0	0	1
chr2:20200912\|20201138	hsa-miR-941	0	0	1
chr2:20200912\|20201138	hsa-miR-654-5p	0	0	1
chr2:20200912\|20201138	hsa-miR-361-3p	0	1	1
chr2:20200912\|20201138	hsa-miR-1224-3p	0	0	1
chr2:20200912\|20201138	hsa-miR-502-3p	0	0	1
chr2:20200912\|20201138	hsa-miR-501-3p	0	0	1
chr2:20200912\|20201138	hsa-miR-220b	0	0	1
chr2:20200912\|20201138	hsa-miR-1260	0	0	1
chr2:20200912\|20201138	hsa-miR-1280	0	0	1
chr2:20200912\|20201138	hsa-miR-514	0	0	1
chr2:20200912\|20201138	hsa-miR-544	0	0	1
chr2:20200912\|20201138	hsa-miR-1254	0	0	1
chr2:20200912\|20201138	hsa-miR-549	0	0	1
chr2:20200912\|20201138	hsa-miR-923	0	0	1
chr2:20200912\|20201138	hsa-miR-636	1	0	0
chr2:20200912\|20201138	hsa-miR-4526	1	0	0
chr2:20200912\|20201138	hsa-miR-5193	1	0	0
chr2:20200912\|20201138	hsa-miR-5685	0	1	0
chr2:20200912\|20201138	hsa-miR-5705	1	0	0
chr2:20200912\|20201138	hsa-miR-6749-3p	1	1	0
chr2:20200912\|20201138	hsa-miR-4665-3p	1	0	0
chr2:20200912\|20201138	hsa-miR-6836-3p	1	0	0
chr2:20200912\|20201138	hsa-miR-6892-3p	1	0	0
chr2:20200912\|20201138	hsa-miR-7114-5p	0	1	0
chr2:20200912\|20201138	hsa-miR-874-5p	1	0	0
chr2:20200912\|20201138	hsa-miR-23b-5p	1	0	0
chr2:20200912\|20201138	hsa-miR-1292-5p	1	0	0
chr2:20200912\|20201138	hsa-miR-4697-3p	1	0	0
chr2:20200912\|20201138	hsa-miR-6782-5p	1	0	0
chr2:20200912\|20201138	hsa-miR-4793-3p	1	0	0
chr2:20200912\|20201138	hsa-miR-6765-3p	1	0	0
chr2:20200912\|20201138	hsa-miR-4713-5p	1	0	0
chr2:20200912\|20201138	hsa-miR-4793-5p	1	0	0
chr2:20200912\|20201138	hsa-miR-6813-3p	1	1	0
chr2:20200912\|20201138	hsa-miR-6801-5p	0	1	0
chr2:20200912\|20201138	hsa-miR-25-3p	0	1	0
chr2:20200912\|20201138	hsa-miR-6750-5p	1	1	0
chr2:20200912\|20201138	hsa-miR-6822-5p	0	1	0
chr2:20200912\|20201138	hsa-miR-10400-3p	1	0	0
chr2:20200912\|20201138	hsa-miR-10392-3p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:20200912\|20201138
ORF Type	ORF1
Protein Length	72
Nucleotide Length	216
Protein Sequence	MCSHTLQAESRSIEYRTQVPLAWWCISDPQTGPPLGVANGVAETLSNKQVSAGALGWGPLASAAGWEEDVQG
Nucleotide Sequence	ATGTGCAGTCATACACTCCAGGCAGAAAGTCGCAGTATCGAATACCGGACACAGGTTCCCTTGGCTTGGTGGTGCATCTCTGATCCACAGACTGGCCCACCTCTCGGAGTGGCCAACGGAGTCGCTGAAACGTTGTCAAATAAGCAAGTAAGTGCAGGAGCCCTGGGCTGGGGGCCTCTGGCCTCTGCAGCCGGGTGGGAGGAGGATGTCCAAGGT

CircID	chr2:20200912\|20201138
ORF Type	ORF2
Protein Length	35
Nucleotide Length	108
Protein Sequence	MATPRGGPVCGSEMHHQAKGTCVRYSILRLSAWSV
Nucleotide Sequence	TTGGCCACTCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGCACCACCAAGCCAAGGGAACCTGTGTCCGGTATTCGATACTGCGACTTTCTGCCTGGAGTGTATGA

CircID	chr2:20200912\|20201138
ORF Type	ORF3
Protein Length	63
Nucleotide Length	192
Protein Sequence	MQRPEAPSPGLLHLLAYLTTFQRLRWPLREVGQSVDQRCTTKPREPVSGIRYCDFLPGVYDCT
Nucleotide Sequence	CTGCAGAGGCCAGAGGCCCCCAGCCCAGGGCTCCTGCACTTACTTGCTTATTTGACAACGTTTCAGCGACTCCGTTGGCCACTCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGCACCACCAAGCCAAGGGAACCTGTGTCCGGTATTCGATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGA

CircID	chr2:20200912\|20201138
ORF Type	ORF4
Protein Length	25
Nucleotide Length	78
Protein Sequence	MDILLPPGCRGQRPPAQGSCTYLLI
Nucleotide Sequence	TTGGACATCCTCCTCCCACCCGGCTGCAGAGGCCAGAGGCCCCCAGCCCAGGGCTCCTGCACTTACTTGCTTATTTGA

CircID	chr2:20200912\|20201138
ORF Type	ORF5
Protein Length	33
Nucleotide Length	99
Protein Sequence	MWIRDAPPSQGNLCPVFDTATFCLECMTAHDSG
Nucleotide Sequence	CTGTGGATCAGAGATGCACCACCAAGCCAAGGGAACCTGTGTCCGGTATTCGATACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACTCGGGG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information