CircRNA Information

General Information
circRNA Basic Information
CircID chr2:20200975|20201195
Strand +
CircType exon
Host Gene ENSG00000115884.9;
Algorism CIRI2;
Sequence AGCTTGACCTGAGGCTGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGACACCTTGGACATCCTCCTCCCACCCGGCTGCAGAGGCCAGAGGCCCCCAGCCCAGGGCTCCTGCACTTACTTGCTTATTTGACAACGTTTCAGCGACTCCGTTGGCCACTCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGCACCACCAAGCCAAGGGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:20200975|20201195 hsa-miR-204-5p 0 0 1
chr2:20200975|20201195 hsa-miR-204-3p 0 0 1
chr2:20200975|20201195 hsa-miR-211-5p 0 0 1
chr2:20200975|20201195 hsa-miR-211-3p 0 0 1
chr2:20200975|20201195 hsa-miR-302a-5p 0 0 1
chr2:20200975|20201195 hsa-miR-302a-3p 0 0 1
chr2:20200975|20201195 hsa-miR-302b-5p 0 0 1
chr2:20200975|20201195 hsa-miR-302b-3p 0 0 1
chr2:20200975|20201195 hsa-miR-302c-5p 0 0 1
chr2:20200975|20201195 hsa-miR-302c-3p 0 0 1
chr2:20200975|20201195 hsa-miR-302d-5p 0 0 1
chr2:20200975|20201195 hsa-miR-302d-3p 0 0 1
chr2:20200975|20201195 hsa-miR-372-5p 0 0 1
chr2:20200975|20201195 hsa-miR-372-3p 0 0 1
chr2:20200975|20201195 hsa-miR-373-5p 0 0 1
chr2:20200975|20201195 hsa-miR-373-3p 0 0 1
chr2:20200975|20201195 hsa-miR-346 0 0 1
chr2:20200975|20201195 hsa-miR-193b-5p 0 0 1
chr2:20200975|20201195 hsa-miR-193b-3p 0 0 1
chr2:20200975|20201195 hsa-miR-520e-5p 0 0 1
chr2:20200975|20201195 hsa-miR-520e-3p 0 0 1
chr2:20200975|20201195 hsa-miR-520b-5p 0 0 1
chr2:20200975|20201195 hsa-miR-520b-3p 0 0 1
chr2:20200975|20201195 hsa-miR-623 0 0 1
chr2:20200975|20201195 hsa-miR-632 0 0 1
chr2:20200975|20201195 hsa-miR-637 1 1 1
chr2:20200975|20201195 hsa-miR-640 0 1 1
chr2:20200975|20201195 hsa-miR-765 0 1 1
chr2:20200975|20201195 hsa-miR-744-5p 0 0 1
chr2:20200975|20201195 hsa-miR-744-3p 0 0 1
chr2:20200975|20201195 hsa-miR-1228-5p 0 0 1
chr2:20200975|20201195 hsa-miR-1228-3p 0 0 1
chr2:20200975|20201195 hsa-miR-1205 0 0 1
chr2:20200975|20201195 hsa-miR-1286 0 0 1
chr2:20200975|20201195 hsa-miR-1265 0 1 1
chr2:20200975|20201195 hsa-miR-302e 0 0 1
chr2:20200975|20201195 hsa-miR-1184 0 0 1
chr2:20200975|20201195 hsa-miR-1224-3p 0 0 1
chr2:20200975|20201195 hsa-miR-876-3p 0 0 1
chr2:20200975|20201195 hsa-miR-140-3p 0 0 1
chr2:20200975|20201195 hsa-miR-520d-3p 0 0 1
chr2:20200975|20201195 hsa-miR-519b-3p 0 0 1
chr2:20200975|20201195 hsa-miR-519c-3p 0 0 1
chr2:20200975|20201195 hsa-miR-520a-3p 0 0 1
chr2:20200975|20201195 hsa-miR-520c-3p 0 0 1
chr2:20200975|20201195 hsa-miR-193a-3p 0 1 1
chr2:20200975|20201195 hsa-miR-1233 0 0 1
chr2:20200975|20201195 hsa-miR-323-5p 0 0 1
chr2:20200975|20201195 hsa-miR-519a 0 0 1
chr2:20200975|20201195 hsa-miR-612 1 0 0
chr2:20200975|20201195 hsa-miR-638 1 0 0
chr2:20200975|20201195 hsa-miR-762 1 1 0
chr2:20200975|20201195 hsa-miR-892b 0 1 0
chr2:20200975|20201195 hsa-miR-3137 1 0 0
chr2:20200975|20201195 hsa-miR-4270 1 0 0
chr2:20200975|20201195 hsa-miR-4292 0 1 0
chr2:20200975|20201195 hsa-miR-378g 0 1 0
chr2:20200975|20201195 hsa-miR-4449 1 0 0
chr2:20200975|20201195 hsa-miR-4492 0 1 0
chr2:20200975|20201195 hsa-miR-4494 0 1 0
chr2:20200975|20201195 hsa-miR-4525 0 1 0
chr2:20200975|20201195 hsa-miR-1587 1 1 0
chr2:20200975|20201195 hsa-miR-4651 1 0 0
chr2:20200975|20201195 hsa-miR-4656 1 0 0
chr2:20200975|20201195 hsa-miR-4706 1 0 0
chr2:20200975|20201195 hsa-miR-4734 0 1 0
chr2:20200975|20201195 hsa-miR-4739 1 0 0
chr2:20200975|20201195 hsa-miR-4741 1 0 0
chr2:20200975|20201195 hsa-miR-4767 1 0 0
chr2:20200975|20201195 hsa-miR-6133 1 0 0
chr2:20200975|20201195 hsa-miR-8072 1 0 0
chr2:20200975|20201195 hsa-miR-4731-5p 0 1 0
chr2:20200975|20201195 hsa-miR-671-5p 1 0 0
chr2:20200975|20201195 hsa-miR-212-5p 1 1 0
chr2:20200975|20201195 hsa-miR-6861-5p 1 0 0
chr2:20200975|20201195 hsa-miR-7106-5p 1 1 0
chr2:20200975|20201195 hsa-miR-6089 1 0 0
chr2:20200975|20201195 hsa-miR-4722-5p 0 1 0
chr2:20200975|20201195 hsa-miR-3677-5p 0 1 0
chr2:20200975|20201195 hsa-miR-1301-3p 1 1 0
chr2:20200975|20201195 hsa-miR-432-5p 1 1 0
chr2:20200975|20201195 hsa-miR-6742-5p 0 1 0
chr2:20200975|20201195 hsa-miR-6748-5p 1 0 0
chr2:20200975|20201195 hsa-miR-185-3p 1 0 0
chr2:20200975|20201195 hsa-miR-30b-3p 1 1 0
chr2:20200975|20201195 hsa-miR-7109-5p 1 0 0
chr2:20200975|20201195 hsa-miR-1226-5p 1 0 0
chr2:20200975|20201195 hsa-miR-1229-5p 1 0 0
chr2:20200975|20201195 hsa-miR-6771-5p 1 0 0
chr2:20200975|20201195 hsa-miR-4743-5p 1 0 0
chr2:20200975|20201195 hsa-miR-149-3p 1 0 0
chr2:20200975|20201195 hsa-miR-7156-3p 0 1 0
chr2:20200975|20201195 hsa-miR-1306-5p 0 1 0
chr2:20200975|20201195 hsa-miR-1307-3p 1 0 0
chr2:20200975|20201195 hsa-miR-6792-5p 1 0 0
chr2:20200975|20201195 hsa-miR-3151-3p 0 1 0
chr2:20200975|20201195 hsa-miR-188-5p 0 1 0
chr2:20200975|20201195 hsa-miR-1306-3p 1 0 0
chr2:20200975|20201195 hsa-miR-6808-3p 0 1 0
chr2:20200975|20201195 hsa-miR-1233-5p 1 0 0
chr2:20200975|20201195 hsa-miR-1273h-5p 1 0 0
chr2:20200975|20201195 hsa-miR-4763-3p 1 0 0
chr2:20200975|20201195 hsa-miR-6769b-5p 1 0 0
chr2:20200975|20201195 hsa-miR-6778-5p 1 1 0
chr2:20200975|20201195 hsa-miR-6756-5p 1 1 0
chr2:20200975|20201195 hsa-miR-6769a-5p 1 0 0
chr2:20200975|20201195 hsa-miR-6819-5p 1 0 0
chr2:20200975|20201195 hsa-miR-7107-5p 1 0 0
chr2:20200975|20201195 hsa-miR-10401-5p 1 0 0
chr2:20200975|20201195 hsa-miR-11181-3p 1 1 0
chr2:20200975|20201195 hsa-miR-1249-5p 1 0 0
chr2:20200975|20201195 hsa-miR-6722-3p 1 0 0
chr2:20200975|20201195 hsa-miR-6774-5p 0 1 0
chr2:20200975|20201195 hsa-miR-6779-5p 1 0 0
chr2:20200975|20201195 hsa-miR-7111-5p 1 0 0
chr2:20200975|20201195 hsa-miR-3620-5p 1 1 0
chr2:20200975|20201195 hsa-miR-5196-5p 1 0 0
chr2:20200975|20201195 hsa-miR-3689a-3p 0 1 0
chr2:20200975|20201195 hsa-miR-6795-5p 1 0 0
chr2:20200975|20201195 hsa-miR-6887-5p 1 0 0
chr2:20200975|20201195 hsa-miR-4758-5p 1 0 0
chr2:20200975|20201195 hsa-miR-3198 1 0 0
chr2:20200975|20201195 hsa-miR-3940-5p 1 0 0
chr2:20200975|20201195 hsa-miR-6766-5p 1 1 0
chr2:20200975|20201195 hsa-miR-6785-5p 1 0 0
chr2:20200975|20201195 hsa-miR-6791-5p 0 1 0
chr2:20200975|20201195 hsa-miR-6744-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:20200975|20201195
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MQRPEAPSPGLLHLLAYLTTFQRLRWPLREVGQSVDQRCTTKPRE
Nucleotide Sequence CTGCAGAGGCCAGAGGCCCCCAGCCCAGGGCTCCTGCACTTACTTGCTTATTTGACAACGTTTCAGCGACTCCGTTGGCCACTCCGAGAGGTGGGCCAGTCTGTGGATCAGAGATGCACCACCAAGCCAAGGGAA
CircID chr2:20200975|20201195
ORF Type ORF2
Protein Length 43
Nucleotide Length 132
Protein Sequence MRLWSQRRCGAEAYPADTLDILLPPGCRGQRPPAQGSCTYLLI
Nucleotide Sequence CTGAGGCTGTGGTCACAGCGGAGGTGTGGAGCCGAGGCCTACCCCGCAGACACCTTGGACATCCTCCTCCCACCCGGCTGCAGAGGCCAGAGGCCCCCAGCCCAGGGCTCCTGCACTTACTTGCTTATTTGA
CircID chr2:20200975|20201195
ORF Type ORF3
Protein Length 64
Nucleotide Length 195
Protein Sequence MAWWCISDPQTGPPLGVANGVAETLSNKQVSAGALGWGPLASAAGWEEDVQGVCGVGLGSTPPL
Nucleotide Sequence TTGGCTTGGTGGTGCATCTCTGATCCACAGACTGGCCCACCTCTCGGAGTGGCCAACGGAGTCGCTGAAACGTTGTCAAATAAGCAAGTAAGTGCAGGAGCCCTGGGCTGGGGGCCTCTGGCCTCTGCAGCCGGGTGGGAGGAGGATGTCCAAGGTGTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTGA
CircID chr2:20200975|20201195
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MGASGLCSRVGGGCPRCLRGRPRLHTSAVTTASGQA
Nucleotide Sequence CTGGGGGCCTCTGGCCTCTGCAGCCGGGTGGGAGGAGGATGTCCAAGGTGTCTGCGGGGTAGGCCTCGGCTCCACACCTCCGCTGTGACCACAGCCTCAGGTCAAGCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab