CircRNA Information

General Information
circRNA Basic Information
CircID chr2:20201704|20202012
Strand -
CircType exon
Host Gene ENSG00000115884.9;
Algorism CIRI2;
Sequence CCCTCGTCAATTTCCAGGAGGAAGCAGCCCCTGGAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGCCCTCCCTACAGTCCTCTCTGTCTGAAGGCTGAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCAGCCTGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:20201704|20202012 hsa-miR-498-5p 0 0 1
chr2:20201704|20202012 hsa-miR-498-3p 0 0 1
chr2:20201704|20202012 hsa-miR-620 0 0 1
chr2:20201704|20202012 hsa-miR-661 1 1 1
chr2:20201704|20202012 hsa-miR-766-5p 0 0 1
chr2:20201704|20202012 hsa-miR-766-3p 0 0 1
chr2:20201704|20202012 hsa-miR-1183 1 1 1
chr2:20201704|20202012 hsa-miR-1231 0 0 1
chr2:20201704|20202012 hsa-miR-663b 0 0 1
chr2:20201704|20202012 hsa-miR-1247-5p 0 0 1
chr2:20201704|20202012 hsa-miR-1247-3p 0 0 1
chr2:20201704|20202012 hsa-miR-1253 0 0 1
chr2:20201704|20202012 hsa-miR-1257 0 1 1
chr2:20201704|20202012 hsa-miR-1266-5p 0 0 1
chr2:20201704|20202012 hsa-miR-1266-3p 0 0 1
chr2:20201704|20202012 hsa-miR-1267 0 0 1
chr2:20201704|20202012 hsa-miR-1270 0 0 1
chr2:20201704|20202012 hsa-miR-1321 0 0 1
chr2:20201704|20202012 hsa-miR-1324 0 0 1
chr2:20201704|20202012 hsa-miR-512-5p 0 1 1
chr2:20201704|20202012 hsa-miR-566 0 0 1
chr2:20201704|20202012 hsa-miR-876-3p 0 0 1
chr2:20201704|20202012 hsa-miR-875-3p 0 0 1
chr2:20201704|20202012 hsa-miR-1207-5p 0 1 1
chr2:20201704|20202012 hsa-miR-455-3p 0 0 1
chr2:20201704|20202012 hsa-miR-516a-3p 0 0 1
chr2:20201704|20202012 hsa-miR-323-5p 0 0 1
chr2:20201704|20202012 hsa-miR-550 0 0 1
chr2:20201704|20202012 hsa-miR-1300 0 0 1
chr2:20201704|20202012 hsa-miR-1254 0 0 1
chr2:20201704|20202012 hsa-miR-663a 1 0 0
chr2:20201704|20202012 hsa-miR-762 1 0 0
chr2:20201704|20202012 hsa-miR-1538 1 0 0
chr2:20201704|20202012 hsa-miR-1976 0 1 0
chr2:20201704|20202012 hsa-miR-2861 0 1 0
chr2:20201704|20202012 hsa-miR-3131 1 1 0
chr2:20201704|20202012 hsa-miR-3196 1 1 0
chr2:20201704|20202012 hsa-miR-4298 1 0 0
chr2:20201704|20202012 hsa-miR-4254 0 1 0
chr2:20201704|20202012 hsa-miR-4270 1 0 0
chr2:20201704|20202012 hsa-miR-4425 1 1 0
chr2:20201704|20202012 hsa-miR-4440 0 1 0
chr2:20201704|20202012 hsa-miR-4456 0 1 0
chr2:20201704|20202012 hsa-miR-4462 1 0 0
chr2:20201704|20202012 hsa-miR-4476 1 0 0
chr2:20201704|20202012 hsa-miR-4483 0 1 0
chr2:20201704|20202012 hsa-miR-4518 0 1 0
chr2:20201704|20202012 hsa-miR-4673 1 0 0
chr2:20201704|20202012 hsa-miR-4683 0 1 0
chr2:20201704|20202012 hsa-miR-4721 1 0 0
chr2:20201704|20202012 hsa-miR-4739 1 1 0
chr2:20201704|20202012 hsa-miR-4741 1 1 0
chr2:20201704|20202012 hsa-miR-5703 1 0 0
chr2:20201704|20202012 hsa-miR-5739 1 0 0
chr2:20201704|20202012 hsa-miR-6069 1 0 0
chr2:20201704|20202012 hsa-miR-8052 1 1 0
chr2:20201704|20202012 hsa-miR-8085 1 0 0
chr2:20201704|20202012 hsa-miR-9903 0 1 0
chr2:20201704|20202012 hsa-miR-103a-2-5p 0 1 0
chr2:20201704|20202012 hsa-miR-4433b-3p 0 1 0
chr2:20201704|20202012 hsa-miR-128-1-5p 0 1 0
chr2:20201704|20202012 hsa-miR-22-3p 0 1 0
chr2:20201704|20202012 hsa-miR-323a-5p 0 1 0
chr2:20201704|20202012 hsa-miR-4665-3p 1 0 0
chr2:20201704|20202012 hsa-miR-1273h-3p 0 1 0
chr2:20201704|20202012 hsa-miR-6765-5p 1 0 0
chr2:20201704|20202012 hsa-miR-671-5p 1 0 0
chr2:20201704|20202012 hsa-miR-4687-3p 1 0 0
chr2:20201704|20202012 hsa-miR-6799-5p 1 0 0
chr2:20201704|20202012 hsa-miR-8071 1 0 0
chr2:20201704|20202012 hsa-miR-6089 1 0 0
chr2:20201704|20202012 hsa-miR-7160-5p 1 1 0
chr2:20201704|20202012 hsa-miR-6820-5p 0 1 0
chr2:20201704|20202012 hsa-miR-6762-3p 1 1 0
chr2:20201704|20202012 hsa-miR-4728-3p 0 1 0
chr2:20201704|20202012 hsa-miR-185-3p 1 1 0
chr2:20201704|20202012 hsa-miR-1224-5p 1 0 0
chr2:20201704|20202012 hsa-miR-5008-5p 1 0 0
chr2:20201704|20202012 hsa-miR-6735-3p 0 1 0
chr2:20201704|20202012 hsa-miR-3934-3p 0 1 0
chr2:20201704|20202012 hsa-miR-6786-5p 1 0 0
chr2:20201704|20202012 hsa-miR-939-3p 0 1 0
chr2:20201704|20202012 hsa-miR-1226-5p 0 1 0
chr2:20201704|20202012 hsa-miR-6514-3p 0 1 0
chr2:20201704|20202012 hsa-miR-3691-5p 0 1 0
chr2:20201704|20202012 hsa-miR-3127-5p 0 1 0
chr2:20201704|20202012 hsa-miR-6771-5p 1 0 0
chr2:20201704|20202012 hsa-miR-6749-5p 1 0 0
chr2:20201704|20202012 hsa-miR-149-3p 1 1 0
chr2:20201704|20202012 hsa-miR-3162-5p 0 1 0
chr2:20201704|20202012 hsa-miR-3190-5p 0 1 0
chr2:20201704|20202012 hsa-miR-6895-5p 0 1 0
chr2:20201704|20202012 hsa-miR-3120-5p 0 1 0
chr2:20201704|20202012 hsa-miR-6811-3p 0 1 0
chr2:20201704|20202012 hsa-miR-3614-3p 0 1 0
chr2:20201704|20202012 hsa-miR-6746-3p 0 1 0
chr2:20201704|20202012 hsa-miR-6508-3p 0 1 0
chr2:20201704|20202012 hsa-miR-4649-3p 0 1 0
chr2:20201704|20202012 hsa-miR-10400-5p 1 1 0
chr2:20201704|20202012 hsa-miR-4763-3p 1 1 0
chr2:20201704|20202012 hsa-miR-6816-5p 1 0 0
chr2:20201704|20202012 hsa-miR-6737-5p 1 0 0
chr2:20201704|20202012 hsa-miR-6754-5p 1 0 0
chr2:20201704|20202012 hsa-miR-6722-3p 1 1 0
chr2:20201704|20202012 hsa-miR-6779-5p 1 0 0
chr2:20201704|20202012 hsa-miR-6780a-5p 1 0 0
chr2:20201704|20202012 hsa-miR-6797-5p 1 0 0
chr2:20201704|20202012 hsa-miR-6780b-5p 1 0 0
chr2:20201704|20202012 hsa-miR-1909-3p 1 1 0
chr2:20201704|20202012 hsa-miR-328-5p 1 1 0
chr2:20201704|20202012 hsa-miR-6848-5p 1 0 0
chr2:20201704|20202012 hsa-miR-6858-5p 1 0 0
chr2:20201704|20202012 hsa-miR-6883-5p 0 1 0
chr2:20201704|20202012 hsa-miR-6511b-5p 1 0 0
chr2:20201704|20202012 hsa-miR-6856-5p 1 1 0
chr2:20201704|20202012 hsa-miR-1271-3p 1 1 0
chr2:20201704|20202012 hsa-miR-4646-5p 1 0 0
chr2:20201704|20202012 hsa-miR-6785-5p 0 1 0
chr2:20201704|20202012 hsa-miR-3184-5p 1 0 0
chr2:20201704|20202012 hsa-miR-6724-5p 1 0 0
chr2:20201704|20202012 hsa-miR-2682-3p 0 1 0
chr2:20201704|20202012 hsa-miR-6753-3p 0 1 0
chr2:20201704|20202012 hsa-miR-6762-5p 1 1 0
chr2:20201704|20202012 hsa-miR-6859-5p 1 0 0
chr2:20201704|20202012 hsa-miR-135a-2-3p 0 1 0
chr2:20201704|20202012 hsa-miR-6781-3p 0 1 0
chr2:20201704|20202012 hsa-miR-103a-1-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:20201704|20202012
ORF Type ORF1
Protein Length 63
Nucleotide Length 192
Protein Sequence METAPQAGRAWSAGGSPGPCRPPYSPLCLKAESQHSLLTRASPTWQRPRPQHGPERMDTGTTA
Nucleotide Sequence CTGGAGACGGCGCCACAGGCAGGACGGGCGTGGTCTGCAGGAGGATCTCCAGGCCCCTGCCGCCCTCCCTACAGTCCTCTCTGTCTGAAGGCTGAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGA
CircID chr2:20201704|20202012
ORF Type ORF2
Protein Length 59
Nucleotide Length 180
Protein Sequence MSPSIHFSHGLLQRGSGPGLSMALSAWTQARLLERGGGPTAAWTGQPANRPPETGPPDR
Nucleotide Sequence CTGAGTCCCAGCATTCACTTCTCACACGGGCTTCTCCAACGTGGCAGCGGCCCAGGCCTCAGCATGGCCCTGAGCGCATGGACACAGGCACGACTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCAGCCTGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAG
CircID chr2:20201704|20202012
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MKEAAAPRQPGLASLPTDHQKRGHQTDSPY
Nucleotide Sequence TTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCAGCCTGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAGTCCATAC
CircID chr2:20201704|20202012
ORF Type ORF4
Protein Length 56
Nucleotide Length 171
Protein Sequence MDYLSGGPVSGGLLAGWPVQAAVGPPPLSSSRACVHALRAMLRPGPLPRWRSPCEK
Nucleotide Sequence ATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGA
CircID chr2:20201704|20202012
ORF Type ORF5
Protein Length 42
Nucleotide Length 129
Protein Sequence MLGLSLQTERTVGRAAGAWRSSCRPRPSCLWRRLQGLLPPGN
Nucleotide Sequence ATGCTGGGACTCAGCCTTCAGACAGAGAGGACTGTAGGGAGGGCGGCAGGGGCCTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTCCAGGGGCTGCTTCCTCCTGGAAATTGA
CircID chr2:20201704|20202012
ORF Type ORF6
Protein Length 37
Nucleotide Length 114
Protein Sequence MVAPFLVVCWQAGQSRLPWGRRLFQAVVPVSMRSGPC
Nucleotide Sequence CTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGA
CircID chr2:20201704|20202012
ORF Type ORF7
Protein Length 25
Nucleotide Length 78
Protein Sequence MGRCHVGEARVRSECWDSAFRQRGL
Nucleotide Sequence CTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGAGAAGTGAATGCTGGGACTCAGCCTTCAGACAGAGAGGACTGTAG
CircID chr2:20201704|20202012
ORF Type ORF8
Protein Length 38
Nucleotide Length 117
Protein Sequence MASPGCRGAAASFKQSCLCPCAQGHAEAWAAATLEKPV
Nucleotide Sequence CTGGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGCCTGTGTCCATGCGCTCAGGGCCATGCTGAGGCCTGGGCCGCTGCCACGTTGGAGAAGCCCGTGTGA
CircID chr2:20201704|20202012
ORF Type ORF9
Protein Length 27
Nucleotide Length 81
Protein Sequence MEILLQTTPVLPVAPSPGAASSWKLTR
Nucleotide Sequence CTGGAGATCCTCCTGCAGACCACGCCCGTCCTGCCTGTGGCGCCGTCTCCAGGGGCTGCTTCCTCCTGGAAATTGACGAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab