CircRNA Information

General Information
circRNA Basic Information
CircID chr2:20201912|20202014
Strand +
CircType exon
Host Gene ENSG00000115884.9;
Algorism CIRI2;
Sequence AGGGTATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:20201912|20202014 hsa-miR-422a 0 0 1
chr2:20201912|20202014 hsa-miR-488-5p 0 0 1
chr2:20201912|20202014 hsa-miR-488-3p 0 0 1
chr2:20201912|20202014 hsa-miR-193b-5p 0 0 1
chr2:20201912|20202014 hsa-miR-193b-3p 0 0 1
chr2:20201912|20202014 hsa-miR-583 0 1 1
chr2:20201912|20202014 hsa-miR-596 0 1 1
chr2:20201912|20202014 hsa-miR-1288-5p 0 0 1
chr2:20201912|20202014 hsa-miR-1288-3p 0 0 1
chr2:20201912|20202014 hsa-miR-1324 0 1 1
chr2:20201912|20202014 hsa-miR-193a-3p 0 0 1
chr2:20201912|20202014 hsa-miR-378 0 0 1
chr2:20201912|20202014 hsa-miR-1269 0 0 1
chr2:20201912|20202014 hsa-miR-1254 0 0 1
chr2:20201912|20202014 hsa-miR-661 0 1 0
chr2:20201912|20202014 hsa-miR-1269a 0 1 0
chr2:20201912|20202014 hsa-miR-378c 0 1 0
chr2:20201912|20202014 hsa-miR-378f 0 1 0
chr2:20201912|20202014 hsa-miR-4467 0 1 0
chr2:20201912|20202014 hsa-miR-4515 0 1 0
chr2:20201912|20202014 hsa-miR-1269b 0 1 0
chr2:20201912|20202014 hsa-miR-4435 0 1 0
chr2:20201912|20202014 hsa-miR-874-5p 0 1 0
chr2:20201912|20202014 hsa-miR-6849-3p 0 1 0
chr2:20201912|20202014 hsa-miR-3194-5p 0 1 0
chr2:20201912|20202014 hsa-miR-4763-5p 0 1 0
chr2:20201912|20202014 hsa-miR-3690 0 1 0
chr2:20201912|20202014 hsa-miR-3190-5p 0 1 0
chr2:20201912|20202014 hsa-miR-10400-5p 0 1 0
chr2:20201912|20202014 hsa-miR-6845-5p 0 1 0
chr2:20201912|20202014 hsa-miR-6762-5p 0 1 0
chr2:20201912|20202014 hsa-miR-4722-3p 0 1 0
chr2:20201912|20202014 hsa-miR-10392-3p 0 1 0
chr2:20201912|20202014 hsa-miR-9902 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr2:20201912|20202014
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MVAPFLVVCWQAGQSRLPWGRRLFQAVV
Nucleotide Sequence CTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGTG

CircID chr2:20201912|20202014
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MDYLSGGPVSGGLLAGWPVQAAVGPPPLSSSR
Nucleotide Sequence ATGGACTATCTGTCTGGTGGCCCCGTTTCTGGTGGTCTGTTGGCAGGCTGGCCAGTCCAGGCTGCCGTGGGGCCGCCGCCTCTTTCAAGCAGTCGT

CircID chr2:20201912|20202014
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MLERGGGPTAAWTGQPANRPPETGPPDR
Nucleotide Sequence CTGCTTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCAGCCTGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAG

CircID chr2:20201912|20202014
ORF Type ORF4
Protein Length 31
Nucleotide Length 93
Protein Sequence MKEAAAPRQPGLASLPTDHQKRGHQTDSPYP
Nucleotide Sequence TTGAAAGAGGCGGCGGCCCCACGGCAGCCTGGACTGGCCAGCCTGCCAACAGACCACCAGAAACGGGGCCACCAGACAGATAGTCCATACCCT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites