CircRNA Information

General Information
circRNA Basic Information
CircID chr2:202563114|202563323
Strand -
CircType exon
Host Gene ENSG00000204217.11;
Algorism CIRI2;
Sequence AGGATGTGTAATGGGCTAACGTTTATTTAAAAAGTTCAGGCCAGGTGCAGTGGCTTATGCCTATAATCCCCGCACTTTGGGAGGCCGAGCCGGGTGGATCATGAGGTCAGACGTTCAACACCAGCCTGGCCAAGATGGTGAAACCCCGTCTCTATTAAAAATATTTTTTAAAAATTAACTGAGCGTGGTGGTGGGCGCCTGTAGTCCCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:202563114|202563323 hsa-miR-17-5p 0 0 1
chr2:202563114|202563323 hsa-miR-17-3p 0 0 1
chr2:202563114|202563323 hsa-miR-20a-5p 0 0 1
chr2:202563114|202563323 hsa-miR-20a-3p 0 0 1
chr2:202563114|202563323 hsa-miR-93-5p 0 0 1
chr2:202563114|202563323 hsa-miR-93-3p 0 0 1
chr2:202563114|202563323 hsa-miR-106a-5p 0 0 1
chr2:202563114|202563323 hsa-miR-106a-3p 0 0 1
chr2:202563114|202563323 hsa-miR-197-5p 0 0 1
chr2:202563114|202563323 hsa-miR-197-3p 0 0 1
chr2:202563114|202563323 hsa-miR-150-5p 0 0 1
chr2:202563114|202563323 hsa-miR-150-3p 0 0 1
chr2:202563114|202563323 hsa-miR-106b-5p 0 0 1
chr2:202563114|202563323 hsa-miR-106b-3p 0 0 1
chr2:202563114|202563323 hsa-miR-20b-5p 0 0 1
chr2:202563114|202563323 hsa-miR-20b-3p 0 0 1
chr2:202563114|202563323 hsa-miR-433-5p 0 0 1
chr2:202563114|202563323 hsa-miR-433-3p 0 0 1
chr2:202563114|202563323 hsa-miR-519d-5p 0 0 1
chr2:202563114|202563323 hsa-miR-519d-3p 0 0 1
chr2:202563114|202563323 hsa-miR-520g-5p 0 0 1
chr2:202563114|202563323 hsa-miR-520g-3p 0 0 1
chr2:202563114|202563323 hsa-miR-520h 0 0 1
chr2:202563114|202563323 hsa-miR-588 0 0 1
chr2:202563114|202563323 hsa-miR-633 0 0 1
chr2:202563114|202563323 hsa-miR-640 0 0 1
chr2:202563114|202563323 hsa-miR-653-5p 0 0 1
chr2:202563114|202563323 hsa-miR-653-3p 0 0 1
chr2:202563114|202563323 hsa-miR-744-5p 0 0 1
chr2:202563114|202563323 hsa-miR-744-3p 0 0 1
chr2:202563114|202563323 hsa-miR-887-5p 0 0 1
chr2:202563114|202563323 hsa-miR-887-3p 0 0 1
chr2:202563114|202563323 hsa-miR-935 0 0 1
chr2:202563114|202563323 hsa-miR-1234-3p 0 0 1
chr2:202563114|202563323 hsa-miR-1234 0 0 1
chr2:202563114|202563323 hsa-miR-542-5p 0 1 1
chr2:202563114|202563323 hsa-miR-941 0 0 1
chr2:202563114|202563323 hsa-miR-483-5p 0 0 1
chr2:202563114|202563323 hsa-miR-885-5p 0 1 1
chr2:202563114|202563323 hsa-miR-574-3p 0 0 1
chr2:202563114|202563323 hsa-miR-590-3p 0 0 1
chr2:202563114|202563323 hsa-miR-220b 0 0 1
chr2:202563114|202563323 hsa-miR-138 0 0 1
chr2:202563114|202563323 hsa-miR-1303 1 1 0
chr2:202563114|202563323 hsa-miR-3176 0 1 0
chr2:202563114|202563323 hsa-miR-4256 0 1 0
chr2:202563114|202563323 hsa-miR-4706 1 1 0
chr2:202563114|202563323 hsa-miR-7978 0 1 0
chr2:202563114|202563323 hsa-miR-138-5p 0 1 0
chr2:202563114|202563323 hsa-miR-6765-5p 1 0 0
chr2:202563114|202563323 hsa-miR-6806-5p 0 1 0
chr2:202563114|202563323 hsa-miR-3130-3p 0 1 0
chr2:202563114|202563323 hsa-miR-6765-3p 1 1 0
chr2:202563114|202563323 hsa-miR-1295b-3p 0 1 0
chr2:202563114|202563323 hsa-miR-92a-3p 0 1 0
chr2:202563114|202563323 hsa-miR-500a-3p 0 1 0
chr2:202563114|202563323 hsa-miR-4749-5p 1 0 0
chr2:202563114|202563323 hsa-miR-6877-3p 1 1 0
chr2:202563114|202563323 hsa-miR-324-3p 0 1 0
chr2:202563114|202563323 hsa-miR-10400-3p 1 0 0
chr2:202563114|202563323 hsa-miR-11181-5p 0 1 0
chr2:202563114|202563323 hsa-miR-619-5p 1 1 0
chr2:202563114|202563323 hsa-miR-3922-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:202563114|202563323
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MGGRAGWIMRSDVQHQPGQDGETPSLLKIFFKN
Nucleotide Sequence TTGGGAGGCCGAGCCGGGTGGATCATGAGGTCAGACGTTCAACACCAGCCTGGCCAAGATGGTGAAACCCCGTCTCTATTAAAAATATTTTTTAAAAATTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab