CircRNA Information

General Information
circRNA Basic Information
CircID chr2:203304086|203304230
Strand +
CircType exon
Host Gene ENSG00000119004.13;
Algorism CIRI2;
Sequence CTCCAGAGTCTGGCTGAGACCTATGGAGTCTCACTCTGTCACCTAGGCTGGAGTACAGTGGTGCGATCTCGGCACACTGCAACCTCCACCTCCCAGACATTCTCCTGCCTCAGCCTCTCAACTAGCTGGGATTACATTCGCCCGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:203304086|203304230 hsa-miR-380-5p 0 0 1
chr2:203304086|203304230 hsa-miR-380-3p 0 0 1
chr2:203304086|203304230 hsa-miR-648 0 0 1
chr2:203304086|203304230 hsa-miR-766-5p 0 0 1
chr2:203304086|203304230 hsa-miR-766-3p 0 0 1
chr2:203304086|203304230 hsa-miR-940 0 0 1
chr2:203304086|203304230 hsa-miR-1231 0 1 1
chr2:203304086|203304230 hsa-miR-1827 0 1 1
chr2:203304086|203304230 hsa-miR-485-5p 0 1 1
chr2:203304086|203304230 hsa-miR-508-5p 0 0 1
chr2:203304086|203304230 hsa-miR-654-3p 0 0 1
chr2:203304086|203304230 hsa-miR-542-3p 0 0 1
chr2:203304086|203304230 hsa-miR-516b 0 0 1
chr2:203304086|203304230 hsa-miR-608 1 0 0
chr2:203304086|203304230 hsa-miR-3135a 0 1 0
chr2:203304086|203304230 hsa-miR-4298 1 0 0
chr2:203304086|203304230 hsa-miR-4259 1 0 0
chr2:203304086|203304230 hsa-miR-3929 0 1 0
chr2:203304086|203304230 hsa-miR-3135b 1 0 0
chr2:203304086|203304230 hsa-miR-3689c 0 1 0
chr2:203304086|203304230 hsa-miR-4505 1 0 0
chr2:203304086|203304230 hsa-miR-4651 1 0 0
chr2:203304086|203304230 hsa-miR-4656 1 1 0
chr2:203304086|203304230 hsa-miR-4669 1 0 0
chr2:203304086|203304230 hsa-miR-4688 1 0 0
chr2:203304086|203304230 hsa-miR-4739 1 0 0
chr2:203304086|203304230 hsa-miR-5090 1 0 0
chr2:203304086|203304230 hsa-miR-5787 1 0 0
chr2:203304086|203304230 hsa-miR-6085 1 0 0
chr2:203304086|203304230 hsa-miR-6086 1 1 0
chr2:203304086|203304230 hsa-miR-6133 1 0 0
chr2:203304086|203304230 hsa-miR-6134 1 1 0
chr2:203304086|203304230 hsa-miR-6165 1 0 0
chr2:203304086|203304230 hsa-miR-12114 1 1 0
chr2:203304086|203304230 hsa-miR-6734-5p 1 0 0
chr2:203304086|203304230 hsa-miR-3157-5p 0 1 0
chr2:203304086|203304230 hsa-miR-4433a-3p 1 0 0
chr2:203304086|203304230 hsa-miR-6765-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6720-5p 0 1 0
chr2:203304086|203304230 hsa-miR-6799-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6089 1 0 0
chr2:203304086|203304230 hsa-miR-3192-5p 1 1 0
chr2:203304086|203304230 hsa-miR-6746-5p 1 0 0
chr2:203304086|203304230 hsa-miR-4722-5p 1 1 0
chr2:203304086|203304230 hsa-miR-4755-3p 0 1 0
chr2:203304086|203304230 hsa-miR-7160-5p 1 0 0
chr2:203304086|203304230 hsa-miR-8069 1 0 0
chr2:203304086|203304230 hsa-miR-6760-5p 1 0 0
chr2:203304086|203304230 hsa-miR-2467-3p 1 0 0
chr2:203304086|203304230 hsa-miR-6782-5p 1 0 0
chr2:203304086|203304230 hsa-miR-30b-3p 0 1 0
chr2:203304086|203304230 hsa-miR-4640-5p 1 0 0
chr2:203304086|203304230 hsa-miR-885-3p 1 0 0
chr2:203304086|203304230 hsa-miR-6771-5p 1 0 0
chr2:203304086|203304230 hsa-let-7b-5p 1 1 0
chr2:203304086|203304230 hsa-miR-6800-5p 0 1 0
chr2:203304086|203304230 hsa-miR-6802-5p 1 0 0
chr2:203304086|203304230 hsa-miR-664b-5p 1 0 0
chr2:203304086|203304230 hsa-miR-423-5p 1 0 0
chr2:203304086|203304230 hsa-let-7f-5p 0 1 0
chr2:203304086|203304230 hsa-let-7c-5p 0 1 0
chr2:203304086|203304230 hsa-let-7e-5p 1 1 0
chr2:203304086|203304230 hsa-miR-6832-5p 1 0 0
chr2:203304086|203304230 hsa-miR-4714-3p 0 1 0
chr2:203304086|203304230 hsa-miR-4797-5p 0 1 0
chr2:203304086|203304230 hsa-miR-1207-5p 1 0 0
chr2:203304086|203304230 hsa-miR-1233-5p 1 0 0
chr2:203304086|203304230 hsa-miR-1273h-5p 1 1 0
chr2:203304086|203304230 hsa-miR-3689b-3p 0 1 0
chr2:203304086|203304230 hsa-miR-4763-3p 1 0 0
chr2:203304086|203304230 hsa-miR-6778-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6787-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6865-5p 1 1 0
chr2:203304086|203304230 hsa-miR-6870-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6893-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6726-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6743-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6756-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6803-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6813-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6815-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6851-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6722-3p 1 0 0
chr2:203304086|203304230 hsa-miR-6751-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6774-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6779-5p 1 1 0
chr2:203304086|203304230 hsa-miR-6780a-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6808-5p 1 1 0
chr2:203304086|203304230 hsa-miR-6879-5p 1 0 0
chr2:203304086|203304230 hsa-miR-1909-3p 1 0 0
chr2:203304086|203304230 hsa-miR-3689a-3p 0 1 0
chr2:203304086|203304230 hsa-miR-4745-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6729-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6883-5p 1 0 0
chr2:203304086|203304230 hsa-miR-6831-5p 1 0 0
chr2:203304086|203304230 hsa-miR-377-5p 0 1 0
chr2:203304086|203304230 hsa-miR-6884-5p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:203304086|203304230
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MAETYGVSLCHLGWSTVVRSRHTATSTSQTFSCLSLSTSWDYIRP
Nucleotide Sequence CTGGCTGAGACCTATGGAGTCTCACTCTGTCACCTAGGCTGGAGTACAGTGGTGCGATCTCGGCACACTGCAACCTCCACCTCCCAGACATTCTCCTGCCTCAGCCTCTCAACTAGCTGGGATTACATTCGCCCG
CircID chr2:203304086|203304230
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MSPRLEYSGAISAHCNLHLPDILLPQPLN
Nucleotide Sequence CTGTCACCTAGGCTGGAGTACAGTGGTGCGATCTCGGCACACTGCAACCTCCACCTCCCAGACATTCTCCTGCCTCAGCCTCTCAACTAG
CircID chr2:203304086|203304230
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MSGRWRLQCAEIAPLYSSLGDRVRLHRSQPDSG
Nucleotide Sequence ATGTCTGGGAGGTGGAGGTTGCAGTGTGCCGAGATCGCACCACTGTACTCCAGCCTAGGTGACAGAGTGAGACTCCATAGGTCTCAGCCAGACTCTGGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab