CircRNA Information

General Information
circRNA Basic Information
CircID chr2:20616737|20617025
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGGCCTGCCCGTTGTGTATTCATCCACTGTGGACGCCACCTCCTCAGTGGTCTGGACTCTCTGGACACCATCACAAAGACCCCCAGATATTGATGCTCCAGTATCTGTGGCTTGTTCTTCACCCACAGGACTGCGACTCATGGCCAATCAATGATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAGTGATGTTCTTTTCTGTGCCTAGGCTGATGGCAGACCACCAGGGAGGGGAGAGGGGGAGAGGATTGTCCTTTAAAACAATGGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:20616737|20617025 hsa-miR-198 0 1 1
chr2:20616737|20617025 hsa-miR-206 0 0 1
chr2:20616737|20617025 hsa-miR-346 0 1 1
chr2:20616737|20617025 hsa-miR-588 0 0 1
chr2:20616737|20617025 hsa-miR-613 0 0 1
chr2:20616737|20617025 hsa-miR-637 1 1 1
chr2:20616737|20617025 hsa-miR-758-5p 0 0 1
chr2:20616737|20617025 hsa-miR-758-3p 0 0 1
chr2:20616737|20617025 hsa-miR-1243 0 0 1
chr2:20616737|20617025 hsa-miR-1255a 0 0 1
chr2:20616737|20617025 hsa-miR-1262 0 0 1
chr2:20616737|20617025 hsa-miR-361-5p 0 0 1
chr2:20616737|20617025 hsa-miR-193a-5p 0 1 1
chr2:20616737|20617025 hsa-miR-525-5p 0 0 1
chr2:20616737|20617025 hsa-miR-509-3p 0 0 1
chr2:20616737|20617025 hsa-miR-876-3p 0 0 1
chr2:20616737|20617025 hsa-miR-513a-5p 0 0 1
chr2:20616737|20617025 hsa-miR-34c-3p 1 1 1
chr2:20616737|20617025 hsa-miR-520a-5p 0 0 1
chr2:20616737|20617025 hsa-miR-128 0 0 1
chr2:20616737|20617025 hsa-miR-323-5p 0 0 1
chr2:20616737|20617025 hsa-miR-1255b 0 0 1
chr2:20616737|20617025 hsa-miR-220c 0 0 1
chr2:20616737|20617025 hsa-miR-1 0 0 1
chr2:20616737|20617025 hsa-miR-1273 0 0 1
chr2:20616737|20617025 hsa-miR-499-3p 0 0 1
chr2:20616737|20617025 hsa-miR-608 1 0 0
chr2:20616737|20617025 hsa-miR-3135a 0 1 0
chr2:20616737|20617025 hsa-miR-3197 1 0 0
chr2:20616737|20617025 hsa-miR-4269 0 1 0
chr2:20616737|20617025 hsa-miR-4430 0 1 0
chr2:20616737|20617025 hsa-miR-4456 0 1 0
chr2:20616737|20617025 hsa-miR-4457 0 1 0
chr2:20616737|20617025 hsa-miR-6128 0 1 0
chr2:20616737|20617025 hsa-miR-8078 0 1 0
chr2:20616737|20617025 hsa-miR-8089 1 0 0
chr2:20616737|20617025 hsa-miR-150-3p 1 0 0
chr2:20616737|20617025 hsa-miR-6892-3p 1 1 0
chr2:20616737|20617025 hsa-miR-6881-3p 0 1 0
chr2:20616737|20617025 hsa-miR-6728-5p 1 0 0
chr2:20616737|20617025 hsa-miR-3622a-5p 1 0 0
chr2:20616737|20617025 hsa-miR-3663-3p 1 0 0
chr2:20616737|20617025 hsa-miR-6759-5p 0 1 0
chr2:20616737|20617025 hsa-miR-3187-3p 0 1 0
chr2:20616737|20617025 hsa-miR-7110-3p 1 1 0
chr2:20616737|20617025 hsa-miR-7845-5p 1 0 0
chr2:20616737|20617025 hsa-miR-6845-3p 1 1 0
chr2:20616737|20617025 hsa-miR-6748-5p 0 1 0
chr2:20616737|20617025 hsa-miR-877-3p 1 1 0
chr2:20616737|20617025 hsa-miR-6732-5p 1 0 0
chr2:20616737|20617025 hsa-miR-3691-5p 0 1 0
chr2:20616737|20617025 hsa-miR-3191-5p 0 1 0
chr2:20616737|20617025 hsa-miR-7111-3p 1 1 0
chr2:20616737|20617025 hsa-miR-5196-3p 0 1 0
chr2:20616737|20617025 hsa-miR-7112-5p 0 1 0
chr2:20616737|20617025 hsa-miR-1236-3p 1 1 0
chr2:20616737|20617025 hsa-miR-3681-5p 0 1 0
chr2:20616737|20617025 hsa-miR-6867-3p 0 1 0
chr2:20616737|20617025 hsa-miR-1910-5p 0 1 0
chr2:20616737|20617025 hsa-miR-6882-5p 0 1 0
chr2:20616737|20617025 hsa-miR-6826-3p 0 1 0
chr2:20616737|20617025 hsa-miR-6886-3p 1 0 0
chr2:20616737|20617025 hsa-miR-6880-3p 1 0 0
chr2:20616737|20617025 hsa-miR-1207-5p 1 0 0
chr2:20616737|20617025 hsa-miR-4763-3p 1 0 0
chr2:20616737|20617025 hsa-miR-6775-5p 1 0 0
chr2:20616737|20617025 hsa-miR-6752-5p 1 0 0
chr2:20616737|20617025 hsa-miR-6803-5p 1 0 0
chr2:20616737|20617025 hsa-miR-6815-5p 0 1 0
chr2:20616737|20617025 hsa-miR-6851-5p 1 0 0
chr2:20616737|20617025 hsa-miR-6751-5p 1 1 0
chr2:20616737|20617025 hsa-miR-5189-5p 1 1 0
chr2:20616737|20617025 hsa-miR-6858-5p 1 1 0
chr2:20616737|20617025 hsa-miR-6855-5p 1 0 0
chr2:20616737|20617025 hsa-miR-7151-3p 1 1 0
chr2:20616737|20617025 hsa-miR-3689d 0 1 0
chr2:20616737|20617025 hsa-miR-6753-3p 1 1 0
chr2:20616737|20617025 hsa-miR-6756-3p 1 0 0
chr2:20616737|20617025 hsa-miR-6833-3p 0 1 0
chr2:20616737|20617025 hsa-miR-499a-3p 0 1 0
chr2:20616737|20617025 hsa-miR-4423-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:20616737|20617025
ORF Type ORF1
Protein Length 68
Nucleotide Length 207
Protein Sequence LACPLCIHPLWTPPPQWSGLSGHHHKDPQILMLQYLWLVLHPQDCDSWPINDPCRLIKPVPVTHSSLC
Nucleotide Sequence CTGGCCTGCCCGTTGTGTATTCATCCACTGTGGACGCCACCTCCTCAGTGGTCTGGACTCTCTGGACACCATCACAAAGACCCCCAGATATTGATGCTCCAGTATCTGTGGCTTGTTCTTCACCCACAGGACTGCGACTCATGGCCAATCAATGATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAG
CircID chr2:20616737|20617025
ORF Type ORF2
Protein Length 49
Nucleotide Length 150
Protein Sequence MPVVYSSTVDATSSVVWTLWTPSQRPPDIDAPVSVACSSPTGLRLMANQ
Nucleotide Sequence CTGCCCGTTGTGTATTCATCCACTGTGGACGCCACCTCCTCAGTGGTCTGGACTCTCTGGACACCATCACAAAGACCCCCAGATATTGATGCTCCAGTATCTGTGGCTTGTTCTTCACCCACAGGACTGCGACTCATGGCCAATCAATGA
CircID chr2:20616737|20617025
ORF Type ORF3
Protein Length 43
Nucleotide Length 129
Protein Sequence MSPDKACACDPFQPVLVMFFSVPRLMADHQGGERGRGLSFKTM
Nucleotide Sequence TTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAGTGATGTTCTTTTCTGTGCCTAGGCTGATGGCAGACCACCAGGGAGGGGAGAGGGGGAGAGGATTGTCCTTTAAAACAATG
CircID chr2:20616737|20617025
ORF Type ORF4
Protein Length 49
Nucleotide Length 147
Protein Sequence MAMSRSPVGEEQATDTGASISGGLCDGVQRVQTTEEVASTVDEYTTGRP
Nucleotide Sequence TTGGCCATGAGTCGCAGTCCTGTGGGTGAAGAACAAGCCACAGATACTGGAGCATCAATATCTGGGGGTCTTTGTGATGGTGTCCAGAGAGTCCAGACCACTGAGGAGGTGGCGTCCACAGTGGATGAATACACAACGGGCAGGCCA
CircID chr2:20616737|20617025
ORF Type ORF5
Protein Length 43
Nucleotide Length 129
Protein Sequence MWVKNKPQILEHQYLGVFVMVSRESRPLRRWRPQWMNTQRAGQ
Nucleotide Sequence CTGTGGGTGAAGAACAAGCCACAGATACTGGAGCATCAATATCTGGGGGTCTTTGTGATGGTGTCCAGAGAGTCCAGACCACTGAGGAGGTGGCGTCCACAGTGGATGAATACACAACGGGCAGGCCAG
CircID chr2:20616737|20617025
ORF Type ORF6
Protein Length 25
Nucleotide Length 78
Protein Sequence MEWVTGTGFIRRQGSLIGHESQSCG
Nucleotide Sequence CTGGAATGGGTCACAGGCACAGGCTTTATCAGGCGACAAGGATCATTGATTGGCCATGAGTCGCAGTCCTGTGGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab