CircRNA Information

General Information
circRNA Basic Information
CircID chr2:215365606|215370373
Strand +
CircType exon
Host Gene ENSG00000115414.17;
Algorism CIRI2;
Sequence CTACAACGTCATAGTGGAGGCACTGAAAGACCAGCAGAGGCATAAGGTTCGGGAAGAGGTTGTTACCGTGGGCAACTCTGTCAACGAAGGCTTGAACCAACCTACGGATGACTCGTGCTTTGACCCCTACACAGTTTCCCATTATGCCGTTGGAGATGAGTGGGAACGAATGTCTGAATCAGGCTTTAAACTGTTGTGCCAGTGCTTAGGCTTTGGAAGTGGTCATTTCAGATGTGATTCATCTAGATGGTGCCATGACAATGGTGTGAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:215365606|215370373 hsa-miR-148a-5p 0 0 1
chr2:215365606|215370373 hsa-miR-148a-3p 0 0 1
chr2:215365606|215370373 hsa-miR-183-5p 0 0 1
chr2:215365606|215370373 hsa-miR-183-3p 0 0 1
chr2:215365606|215370373 hsa-miR-152-5p 0 0 1
chr2:215365606|215370373 hsa-miR-152-3p 0 0 1
chr2:215365606|215370373 hsa-miR-377-5p 0 0 1
chr2:215365606|215370373 hsa-miR-377-3p 0 0 1
chr2:215365606|215370373 hsa-miR-148b-5p 0 0 1
chr2:215365606|215370373 hsa-miR-148b-3p 0 0 1
chr2:215365606|215370373 hsa-miR-498-5p 0 0 1
chr2:215365606|215370373 hsa-miR-498-3p 0 0 1
chr2:215365606|215370373 hsa-miR-519e-5p 0 0 1
chr2:215365606|215370373 hsa-miR-519e-3p 0 0 1
chr2:215365606|215370373 hsa-miR-659-5p 0 0 1
chr2:215365606|215370373 hsa-miR-659-3p 0 0 1
chr2:215365606|215370373 hsa-miR-892a 0 0 1
chr2:215365606|215370373 hsa-miR-1228-5p 0 0 1
chr2:215365606|215370373 hsa-miR-1228-3p 0 0 1
chr2:215365606|215370373 hsa-miR-1236-5p 0 0 1
chr2:215365606|215370373 hsa-miR-1236-3p 0 0 1
chr2:215365606|215370373 hsa-miR-548g-5p 0 0 1
chr2:215365606|215370373 hsa-miR-548g-3p 0 0 1
chr2:215365606|215370373 hsa-miR-1324 0 0 1
chr2:215365606|215370373 hsa-miR-767-5p 0 0 1
chr2:215365606|215370373 hsa-miR-330-3p 0 0 1
chr2:215365606|215370373 hsa-miR-532-5p 0 0 1
chr2:215365606|215370373 hsa-miR-188-3p 0 0 1
chr2:215365606|215370373 hsa-miR-515-3p 0 1 1
chr2:215365606|215370373 hsa-miR-515-5p 0 0 1
chr2:215365606|215370373 hsa-miR-1260 0 0 1
chr2:215365606|215370373 hsa-miR-138 0 0 1
chr2:215365606|215370373 hsa-miR-203 0 0 1
chr2:215365606|215370373 hsa-miR-1201 0 0 1
chr2:215365606|215370373 hsa-miR-220a 0 0 1
chr2:215365606|215370373 hsa-miR-4471 0 1 0
chr2:215365606|215370373 hsa-miR-4686 1 1 0
chr2:215365606|215370373 hsa-miR-3692-5p 0 1 0
chr2:215365606|215370373 hsa-miR-593-5p 0 1 0
chr2:215365606|215370373 hsa-miR-6842-3p 1 0 0
chr2:215365606|215370373 hsa-miR-877-3p 0 1 0
chr2:215365606|215370373 hsa-miR-615-3p 1 0 0
chr2:215365606|215370373 hsa-miR-6830-3p 0 1 0
chr2:215365606|215370373 hsa-miR-6824-5p 1 0 0
chr2:215365606|215370373 hsa-miR-593-3p 1 1 0
chr2:215365606|215370373 hsa-miR-135b-3p 0 1 0
chr2:215365606|215370373 hsa-miR-4727-3p 0 1 0
chr2:215365606|215370373 hsa-miR-4665-5p 1 0 0
chr2:215365606|215370373 hsa-miR-6877-3p 1 0 0
chr2:215365606|215370373 hsa-miR-302a-3p 1 0 0
chr2:215365606|215370373 hsa-miR-302d-3p 1 0 0
chr2:215365606|215370373 hsa-miR-4757-5p 1 0 0
chr2:215365606|215370373 hsa-miR-33b-3p 1 1 0
chr2:215365606|215370373 hsa-miR-135a-2-3p 0 1 0
chr2:215365606|215370373 hsa-miR-122b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr2:215365606|215370373
ORF Type ORF1
Protein Length 82
Nucleotide Length 246
Protein Sequence MKDQQRHKVREEVVTVGNSVNEGLNQPTDDSCFDPYTVSHYAVGDEWERMSESGFKLLCQCLGFGSGHFRCDSSRWCHDNGV
Nucleotide Sequence CTGAAAGACCAGCAGAGGCATAAGGTTCGGGAAGAGGTTGTTACCGTGGGCAACTCTGTCAACGAAGGCTTGAACCAACCTACGGATGACTCGTGCTTTGACCCCTACACAGTTTCCCATTATGCCGTTGGAGATGAGTGGGAACGAATGTCTGAATCAGGCTTTAAACTGTTGTGCCAGTGCTTAGGCTTTGGAAGTGGTCATTTCAGATGTGATTCATCTAGATGGTGCCATGACAATGGTGTG

CircID chr2:215365606|215370373
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MTRALTPTQFPIMPLEMSGNECLNQALNCCASA
Nucleotide Sequence ATGACTCGTGCTTTGACCCCTACACAGTTTCCCATTATGCCGTTGGAGATGAGTGGGAACGAATGTCTGAATCAGGCTTTAAACTGTTGTGCCAGTGCTTAG

CircID chr2:215365606|215370373
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MTELPTVTTSSRTLCLCWSFSASTMTL
Nucleotide Sequence TTGACAGAGTTGCCCACGGTAACAACCTCTTCCCGAACCTTATGCCTCTGCTGGTCTTTCAGTGCCTCCACTATGACGTTGTAG

CircID chr2:215365606|215370373
ORF Type ORF4
Protein Length 26
Nucleotide Length 81
Protein Sequence MIQTFVPTHLQRHNGKLCRGQSTSHP
Nucleotide Sequence CTGATTCAGACATTCGTTCCCACTCATCTCCAACGGCATAATGGGAAACTGTGTAGGGGTCAAAGCACGAGTCATCCGTAG

CircID chr2:215365606|215370373
ORF Type ORF5
Protein Length 47
Nucleotide Length 141
Protein Sequence MGNCVGVKARVIRRLVQAFVDRVAHGNNLFPNLMPLLVFQCLHYDVV
Nucleotide Sequence ATGGGAAACTGTGTAGGGGTCAAAGCACGAGTCATCCGTAGGTTGGTTCAAGCCTTCGTTGACAGAGTTGCCCACGGTAACAACCTCTTCCCGAACCTTATGCCTCTGCTGGTCTTTCAGTGCCTCCACTATGACGTTGTA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites