CircRNA Information

General Information
circRNA Basic Information
CircID chr2:215375345|215375686
Strand +
CircType exon
Host Gene ENSG00000115414.17;
Algorism CIRI2;
Sequence CTGTACACCTTGAATGACAATGCTCGGAGCTCCCCTGTGGTCATCGACGCCTCCACTGGTAACTATACCTTCTACTGAGGAAATGCCATTGACTTGTATGCAATCAGTTTCATGAACTCAAAAAACAAATGTGAGGCGTATATTTTTGTATTATAGATTCCAGAGAATCTTGTTTCCGGTTTACAGTATTCTCAGATTCTTTTAAGTGTGTTTAGAACGGCTCGGGAGAAAAGTGTGGGAGTAATTTTCTTGGTTATTTGCCTTCTTAGAGACTTAATTTTGTTTTCTTTCAGCCATTGATGCACCATCCAACCTGCGTTTCCTGGCCACCACACCCAATTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:215375345|215375686 hsa-miR-23a-5p 0 0 1
chr2:215375345|215375686 hsa-miR-23a-3p 0 0 1
chr2:215375345|215375686 hsa-miR-30a-5p 0 0 1
chr2:215375345|215375686 hsa-miR-30a-3p 0 0 1
chr2:215375345|215375686 hsa-miR-30d-5p 0 0 1
chr2:215375345|215375686 hsa-miR-30d-3p 0 0 1
chr2:215375345|215375686 hsa-miR-200b-5p 0 0 1
chr2:215375345|215375686 hsa-miR-200b-3p 0 0 1
chr2:215375345|215375686 hsa-miR-23b-5p 0 0 1
chr2:215375345|215375686 hsa-miR-23b-3p 0 0 1
chr2:215375345|215375686 hsa-miR-30b-5p 0 0 1
chr2:215375345|215375686 hsa-miR-30b-3p 0 0 1
chr2:215375345|215375686 hsa-miR-186-5p 0 0 1
chr2:215375345|215375686 hsa-miR-186-3p 0 0 1
chr2:215375345|215375686 hsa-miR-200c-5p 0 0 1
chr2:215375345|215375686 hsa-miR-200c-3p 0 0 1
chr2:215375345|215375686 hsa-miR-30e-5p 0 0 1
chr2:215375345|215375686 hsa-miR-30e-3p 0 0 1
chr2:215375345|215375686 hsa-miR-374a-5p 0 0 1
chr2:215375345|215375686 hsa-miR-374a-3p 0 0 1
chr2:215375345|215375686 hsa-miR-381-5p 0 0 1
chr2:215375345|215375686 hsa-miR-381-3p 0 0 1
chr2:215375345|215375686 hsa-miR-326 0 0 1
chr2:215375345|215375686 hsa-miR-448 0 0 1
chr2:215375345|215375686 hsa-miR-429 0 0 1
chr2:215375345|215375686 hsa-miR-433-5p 0 0 1
chr2:215375345|215375686 hsa-miR-433-3p 0 0 1
chr2:215375345|215375686 hsa-miR-570-5p 0 0 1
chr2:215375345|215375686 hsa-miR-570-3p 0 0 1
chr2:215375345|215375686 hsa-miR-580-5p 0 0 1
chr2:215375345|215375686 hsa-miR-580-3p 0 0 1
chr2:215375345|215375686 hsa-miR-603 0 0 1
chr2:215375345|215375686 hsa-miR-609 0 0 1
chr2:215375345|215375686 hsa-miR-616-5p 0 0 1
chr2:215375345|215375686 hsa-miR-616-3p 0 0 1
chr2:215375345|215375686 hsa-miR-650 0 0 1
chr2:215375345|215375686 hsa-miR-655-5p 0 0 1
chr2:215375345|215375686 hsa-miR-655-3p 0 0 1
chr2:215375345|215375686 hsa-miR-657 0 0 1
chr2:215375345|215375686 hsa-miR-1264 0 0 1
chr2:215375345|215375686 hsa-miR-300 0 0 1
chr2:215375345|215375686 hsa-miR-374b-5p 0 0 1
chr2:215375345|215375686 hsa-miR-374b-3p 0 0 1
chr2:215375345|215375686 hsa-miR-920 0 1 1
chr2:215375345|215375686 hsa-miR-936 0 1 1
chr2:215375345|215375686 hsa-miR-939-5p 0 0 1
chr2:215375345|215375686 hsa-miR-939-3p 0 0 1
chr2:215375345|215375686 hsa-miR-1183 0 0 1
chr2:215375345|215375686 hsa-miR-1238-5p 0 0 1
chr2:215375345|215375686 hsa-miR-1238-3p 0 0 1
chr2:215375345|215375686 hsa-miR-1206 0 0 1
chr2:215375345|215375686 hsa-miR-1299 0 1 1
chr2:215375345|215375686 hsa-miR-1256 0 0 1
chr2:215375345|215375686 hsa-miR-1262 0 0 1
chr2:215375345|215375686 hsa-miR-129-5p 0 0 1
chr2:215375345|215375686 hsa-miR-615-3p 0 0 1
chr2:215375345|215375686 hsa-miR-532-3p 0 1 1
chr2:215375345|215375686 hsa-miR-188-3p 0 0 1
chr2:215375345|215375686 hsa-miR-875-3p 0 0 1
chr2:215375345|215375686 hsa-miR-140-3p 0 1 1
chr2:215375345|215375686 hsa-miR-199b-3p 0 0 1
chr2:215375345|215375686 hsa-miR-199a-3p 0 0 1
chr2:215375345|215375686 hsa-miR-330-5p 0 0 1
chr2:215375345|215375686 hsa-miR-369-3p 0 0 1
chr2:215375345|215375686 hsa-miR-30c 0 0 1
chr2:215375345|215375686 hsa-miR-220c 0 0 1
chr2:215375345|215375686 hsa-miR-153 0 0 1
chr2:215375345|215375686 hsa-miR-637 1 0 0
chr2:215375345|215375686 hsa-miR-638 1 0 0
chr2:215375345|215375686 hsa-miR-1200 1 1 0
chr2:215375345|215375686 hsa-miR-1268a 1 0 0
chr2:215375345|215375686 hsa-miR-548q 1 0 0
chr2:215375345|215375686 hsa-miR-1193 0 1 0
chr2:215375345|215375686 hsa-miR-4259 1 1 0
chr2:215375345|215375686 hsa-miR-1268b 1 0 0
chr2:215375345|215375686 hsa-miR-4443 0 1 0
chr2:215375345|215375686 hsa-miR-4488 1 0 0
chr2:215375345|215375686 hsa-miR-4682 0 1 0
chr2:215375345|215375686 hsa-miR-4721 1 0 0
chr2:215375345|215375686 hsa-miR-12119 0 1 0
chr2:215375345|215375686 hsa-miR-222-5p 0 1 0
chr2:215375345|215375686 hsa-miR-128-1-5p 1 0 0
chr2:215375345|215375686 hsa-miR-224-5p 0 1 0
chr2:215375345|215375686 hsa-miR-6799-5p 1 0 0
chr2:215375345|215375686 hsa-miR-139-3p 1 0 0
chr2:215375345|215375686 hsa-miR-6089 1 0 0
chr2:215375345|215375686 hsa-miR-6880-5p 1 0 0
chr2:215375345|215375686 hsa-miR-7847-3p 1 1 0
chr2:215375345|215375686 hsa-miR-6741-5p 1 0 0
chr2:215375345|215375686 hsa-miR-6798-5p 1 0 0
chr2:215375345|215375686 hsa-miR-6770-5p 1 0 0
chr2:215375345|215375686 hsa-miR-3186-5p 0 1 0
chr2:215375345|215375686 hsa-miR-4640-5p 1 1 0
chr2:215375345|215375686 hsa-miR-6824-5p 1 0 0
chr2:215375345|215375686 hsa-miR-6789-5p 1 0 0
chr2:215375345|215375686 hsa-miR-629-3p 0 1 0
chr2:215375345|215375686 hsa-miR-4761-5p 0 1 0
chr2:215375345|215375686 hsa-miR-627-5p 0 1 0
chr2:215375345|215375686 hsa-miR-1207-5p 1 0 0
chr2:215375345|215375686 hsa-miR-4763-3p 1 0 0
chr2:215375345|215375686 hsa-miR-6870-5p 1 0 0
chr2:215375345|215375686 hsa-miR-1343-5p 1 0 0
chr2:215375345|215375686 hsa-miR-6726-5p 1 0 0
chr2:215375345|215375686 hsa-miR-6756-5p 1 0 0
chr2:215375345|215375686 hsa-miR-6803-5p 1 0 0
chr2:215375345|215375686 hsa-miR-6851-5p 1 0 0
chr2:215375345|215375686 hsa-miR-10396a-5p 1 0 0
chr2:215375345|215375686 hsa-miR-1237-5p 1 0 0
chr2:215375345|215375686 hsa-miR-328-5p 1 0 0
chr2:215375345|215375686 hsa-miR-4723-5p 1 0 0
chr2:215375345|215375686 hsa-miR-6885-5p 1 0 0
chr2:215375345|215375686 hsa-miR-1914-3p 1 0 0
chr2:215375345|215375686 hsa-miR-6736-5p 1 0 0
chr2:215375345|215375686 hsa-miR-3173-3p 0 1 0
chr2:215375345|215375686 hsa-miR-5197-5p 0 1 0
chr2:215375345|215375686 hsa-miR-3910 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr2:215375345|215375686
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence LYTLNDNARSSPVVIDASTGNYTFY
Nucleotide Sequence CTGTACACCTTGAATGACAATGCTCGGAGCTCCCCTGTGGTCATCGACGCCTCCACTGGTAACTATACCTTCTACTGA
CircID chr2:215375345|215375686
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MTMLGAPLWSSTPPLVTIPSTEEMPLTCMQSVS
Nucleotide Sequence ATGACAATGCTCGGAGCTCCCCTGTGGTCATCGACGCCTCCACTGGTAACTATACCTTCTACTGAGGAAATGCCATTGACTTGTATGCAATCAGTTTCATGA
CircID chr2:215375345|215375686
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MVHQWLKENKIKSLRRQITKKITPTLFSRAVLNTLKRI
Nucleotide Sequence ATGGTGCATCAATGGCTGAAAGAAAACAAAATTAAGTCTCTAAGAAGGCAAATAACCAAGAAAATTACTCCCACACTTTTCTCCCGAGCCGTTCTAAACACACTTAAAAGAATCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab