CircRNA Information

General Information
circRNA Basic Information
CircID chr2:216672707|216672939
Strand +
CircType exon
Host Gene ENSG00000115461.4;
Algorism CIRI2;
Sequence CTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTGCAAGAATTACATTGCACTGTTTCTCCACTTTTTATTTTCTCTTAGGCTTTTGTTTCTATTTCAAACATACTTTCTTGGTTTTCTAATGGAGTATATAGTTTAGTCATTTCACAGACTCTGGCCTCCTCTCCTGAAATCCTTTTGGATGGGGAAAGGGAAGGTGGGGAGGGTCCGAGGGGAAGGGGACCCCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:216672707|216672939 hsa-miR-148a-5p 0 0 1
chr2:216672707|216672939 hsa-miR-148a-3p 0 0 1
chr2:216672707|216672939 hsa-miR-204-5p 0 0 1
chr2:216672707|216672939 hsa-miR-204-3p 0 0 1
chr2:216672707|216672939 hsa-miR-211-5p 0 0 1
chr2:216672707|216672939 hsa-miR-211-3p 0 0 1
chr2:216672707|216672939 hsa-miR-130a-5p 0 0 1
chr2:216672707|216672939 hsa-miR-130a-3p 0 0 1
chr2:216672707|216672939 hsa-miR-152-5p 0 0 1
chr2:216672707|216672939 hsa-miR-152-3p 0 0 1
chr2:216672707|216672939 hsa-miR-136-5p 0 0 1
chr2:216672707|216672939 hsa-miR-136-3p 0 0 1
chr2:216672707|216672939 hsa-miR-301a-5p 0 0 1
chr2:216672707|216672939 hsa-miR-301a-3p 0 0 1
chr2:216672707|216672939 hsa-miR-130b-5p 0 0 1
chr2:216672707|216672939 hsa-miR-130b-3p 0 0 1
chr2:216672707|216672939 hsa-miR-380-5p 0 0 1
chr2:216672707|216672939 hsa-miR-380-3p 0 0 1
chr2:216672707|216672939 hsa-miR-148b-5p 0 0 1
chr2:216672707|216672939 hsa-miR-148b-3p 0 0 1
chr2:216672707|216672939 hsa-miR-567 0 0 1
chr2:216672707|216672939 hsa-miR-623 0 0 1
chr2:216672707|216672939 hsa-miR-624-5p 0 0 1
chr2:216672707|216672939 hsa-miR-624-3p 0 0 1
chr2:216672707|216672939 hsa-miR-454-5p 0 0 1
chr2:216672707|216672939 hsa-miR-454-3p 0 0 1
chr2:216672707|216672939 hsa-miR-301b-5p 0 0 1
chr2:216672707|216672939 hsa-miR-301b-3p 0 0 1
chr2:216672707|216672939 hsa-miR-548l 0 0 1
chr2:216672707|216672939 hsa-miR-1324 0 0 1
chr2:216672707|216672939 hsa-miR-140-5p 0 0 1
chr2:216672707|216672939 hsa-miR-615-5p 1 1 1
chr2:216672707|216672939 hsa-miR-508-5p 0 0 1
chr2:216672707|216672939 hsa-miR-1224-3p 1 1 1
chr2:216672707|216672939 hsa-miR-885-5p 0 0 1
chr2:216672707|216672939 hsa-miR-876-5p 0 0 1
chr2:216672707|216672939 hsa-miR-548d-3p 0 0 1
chr2:216672707|216672939 hsa-miR-203 0 0 1
chr2:216672707|216672939 hsa-miR-101 0 0 1
chr2:216672707|216672939 hsa-miR-3125 1 0 0
chr2:216672707|216672939 hsa-miR-3135a 1 0 0
chr2:216672707|216672939 hsa-miR-3167 0 1 0
chr2:216672707|216672939 hsa-miR-4295 0 1 0
chr2:216672707|216672939 hsa-miR-3666 0 1 0
chr2:216672707|216672939 hsa-miR-5739 1 0 0
chr2:216672707|216672939 hsa-miR-12117 1 1 0
chr2:216672707|216672939 hsa-miR-6749-3p 1 0 0
chr2:216672707|216672939 hsa-miR-205-3p 0 1 0
chr2:216672707|216672939 hsa-miR-106a-3p 0 1 0
chr2:216672707|216672939 hsa-miR-6089 1 0 0
chr2:216672707|216672939 hsa-miR-6880-5p 1 1 0
chr2:216672707|216672939 hsa-miR-6768-5p 1 1 0
chr2:216672707|216672939 hsa-miR-6827-5p 1 0 0
chr2:216672707|216672939 hsa-miR-7111-3p 1 0 0
chr2:216672707|216672939 hsa-miR-3925-5p 1 0 0
chr2:216672707|216672939 hsa-miR-17-5p 1 0 0
chr2:216672707|216672939 hsa-miR-106a-5p 1 0 0
chr2:216672707|216672939 hsa-miR-1236-3p 1 1 0
chr2:216672707|216672939 hsa-miR-6826-3p 0 1 0
chr2:216672707|216672939 hsa-miR-5088-3p 1 1 0
chr2:216672707|216672939 hsa-miR-328-3p 1 0 0
chr2:216672707|216672939 hsa-miR-6795-3p 1 1 0
chr2:216672707|216672939 hsa-miR-6734-3p 0 1 0
chr2:216672707|216672939 hsa-miR-4796-3p 0 1 0
chr2:216672707|216672939 hsa-miR-3162-3p 1 0 0
chr2:216672707|216672939 hsa-miR-5007-5p 0 1 0
chr2:216672707|216672939 hsa-miR-6512-5p 0 1 0
chr2:216672707|216672939 hsa-miR-320a-5p 0 1 0
chr2:216672707|216672939 hsa-miR-4726-5p 1 0 0
chr2:216672707|216672939 hsa-miR-6856-5p 1 0 0
chr2:216672707|216672939 hsa-miR-6756-3p 1 1 0
chr2:216672707|216672939 hsa-miR-4723-3p 1 0 0
chr2:216672707|216672939 hsa-miR-5006-3p 0 1 0
chr2:216672707|216672939 hsa-miR-151a-5p 0 1 0
chr2:216672707|216672939 hsa-miR-106b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:216672707|216672939
ORF Type ORF1
Protein Length 47
Nucleotide Length 144
Protein Sequence LGLVLSVFLKPLKCKNYIALFLHFLFSLRLLFLFQTYFLGFLMEYIV
Nucleotide Sequence CTGGGCCTTGTACTGTCTGTGTTTTTAAAACCACTAAAGTGCAAGAATTACATTGCACTGTTTCTCCACTTTTTATTTTCTCTTAGGCTTTTGTTTCTATTTCAAACATACTTTCTTGGTTTTCTAATGGAGTATATAGTTTAG
CircID chr2:216672707|216672939
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MASSPEILLDGEREGGEGPRGRGPQ
Nucleotide Sequence CTGGCCTCCTCTCCTGAAATCCTTTTGGATGGGGAAAGGGAAGGTGGGGAGGGTCCGAGGGGAAGGGGACCCCAG
CircID chr2:216672707|216672939
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence LGSPSPRTLPTFPFPIQKDFRRGGQSL
Nucleotide Sequence CTGGGGTCCCCTTCCCCTCGGACCCTCCCCACCTTCCCTTTCCCCATCCAAAAGGATTTCAGGAGAGGAGGCCAGAGTCTGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab