CircRNA Information

General Information
circRNA Basic Information
CircID chr2:216678154|216679024
Strand +
CircType exon
Host Gene ENSG00000115461.4;
Algorism CIRI2;
Sequence CTACTCCCCCAAGATCTTCCGGCCCAAACACACCCGCATCTCCGAGCTGAAGGCTGAAGCAGTGAAGAAGGACCGCAGAAAGAAGCTGACCCAGTCCAAGTTTGTCGGGGGAGCCGAGAACACTGCCCACCCCCGGATCATCTCTGCACCTGAGATGAGACAGGAGTCTGAGCAGGGCCCCTGCCGCAGACACATGGAGGCTTCCCTGCAGGAGCTCAAAGCCAGCCCACGCATGGTGCCCCGTGCTGTGTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:216678154|216679024 hsa-miR-34a-5p 0 0 1
chr2:216678154|216679024 hsa-miR-34a-3p 0 0 1
chr2:216678154|216679024 hsa-miR-143-5p 0 0 1
chr2:216678154|216679024 hsa-miR-143-3p 0 0 1
chr2:216678154|216679024 hsa-miR-346 0 0 1
chr2:216678154|216679024 hsa-miR-449a 0 0 1
chr2:216678154|216679024 hsa-miR-412-5p 0 0 1
chr2:216678154|216679024 hsa-miR-412-3p 0 0 1
chr2:216678154|216679024 hsa-miR-608 0 0 1
chr2:216678154|216679024 hsa-miR-625-5p 0 0 1
chr2:216678154|216679024 hsa-miR-625-3p 0 0 1
chr2:216678154|216679024 hsa-miR-632 0 0 1
chr2:216678154|216679024 hsa-miR-635 0 0 1
chr2:216678154|216679024 hsa-miR-449b-5p 0 0 1
chr2:216678154|216679024 hsa-miR-449b-3p 0 0 1
chr2:216678154|216679024 hsa-miR-890 0 1 1
chr2:216678154|216679024 hsa-miR-541-5p 0 0 1
chr2:216678154|216679024 hsa-miR-541-3p 0 0 1
chr2:216678154|216679024 hsa-miR-1237-5p 0 0 1
chr2:216678154|216679024 hsa-miR-1237-3p 0 0 1
chr2:216678154|216679024 hsa-miR-1205 0 0 1
chr2:216678154|216679024 hsa-miR-1291 0 0 1
chr2:216678154|216679024 hsa-miR-1248 0 0 1
chr2:216678154|216679024 hsa-miR-1266-5p 0 0 1
chr2:216678154|216679024 hsa-miR-1266-3p 0 0 1
chr2:216678154|216679024 hsa-miR-1275 0 0 1
chr2:216678154|216679024 hsa-miR-1288-5p 0 0 1
chr2:216678154|216679024 hsa-miR-1288-3p 0 0 1
chr2:216678154|216679024 hsa-miR-1307-5p 0 0 1
chr2:216678154|216679024 hsa-miR-1307-3p 0 0 1
chr2:216678154|216679024 hsa-miR-671-5p 0 1 1
chr2:216678154|216679024 hsa-miR-125a-3p 0 0 1
chr2:216678154|216679024 hsa-miR-767-5p 0 1 1
chr2:216678154|216679024 hsa-miR-654-5p 0 0 1
chr2:216678154|216679024 hsa-miR-767-3p 0 1 1
chr2:216678154|216679024 hsa-miR-34c-5p 0 1 1
chr2:216678154|216679024 hsa-miR-1269 0 0 1
chr2:216678154|216679024 hsa-miR-544 0 0 1
chr2:216678154|216679024 hsa-miR-886-3p 0 0 1
chr2:216678154|216679024 hsa-miR-572 1 0 0
chr2:216678154|216679024 hsa-miR-612 0 1 0
chr2:216678154|216679024 hsa-miR-663a 1 0 0
chr2:216678154|216679024 hsa-miR-762 1 0 0
chr2:216678154|216679024 hsa-miR-940 0 1 0
chr2:216678154|216679024 hsa-miR-1469 1 0 0
chr2:216678154|216679024 hsa-miR-2909 1 0 0
chr2:216678154|216679024 hsa-miR-4267 1 0 0
chr2:216678154|216679024 hsa-miR-3615 1 1 0
chr2:216678154|216679024 hsa-miR-4430 1 0 0
chr2:216678154|216679024 hsa-miR-4466 1 0 0
chr2:216678154|216679024 hsa-miR-4487 1 0 0
chr2:216678154|216679024 hsa-miR-4488 1 0 0
chr2:216678154|216679024 hsa-miR-4498 1 1 0
chr2:216678154|216679024 hsa-miR-4507 1 0 0
chr2:216678154|216679024 hsa-miR-1269b 0 1 0
chr2:216678154|216679024 hsa-miR-1587 1 0 0
chr2:216678154|216679024 hsa-miR-4538 1 1 0
chr2:216678154|216679024 hsa-miR-4651 0 1 0
chr2:216678154|216679024 hsa-miR-4656 1 0 0
chr2:216678154|216679024 hsa-miR-4674 1 0 0
chr2:216678154|216679024 hsa-miR-4706 1 0 0
chr2:216678154|216679024 hsa-miR-4734 1 0 0
chr2:216678154|216679024 hsa-miR-4739 1 0 0
chr2:216678154|216679024 hsa-miR-4741 1 0 0
chr2:216678154|216679024 hsa-miR-5090 0 1 0
chr2:216678154|216679024 hsa-miR-5787 1 0 0
chr2:216678154|216679024 hsa-miR-6088 1 1 0
chr2:216678154|216679024 hsa-miR-8055 0 1 0
chr2:216678154|216679024 hsa-miR-10226 0 1 0
chr2:216678154|216679024 hsa-miR-103a-2-5p 0 1 0
chr2:216678154|216679024 hsa-miR-6799-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6728-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6867-5p 1 0 0
chr2:216678154|216679024 hsa-miR-593-5p 0 1 0
chr2:216678154|216679024 hsa-miR-6727-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6759-5p 1 0 0
chr2:216678154|216679024 hsa-miR-3180-3p 1 0 0
chr2:216678154|216679024 hsa-miR-6748-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6772-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6793-5p 1 0 0
chr2:216678154|216679024 hsa-miR-185-3p 1 0 0
chr2:216678154|216679024 hsa-miR-6829-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6732-5p 1 0 0
chr2:216678154|216679024 hsa-miR-3156-5p 0 1 0
chr2:216678154|216679024 hsa-miR-6821-5p 1 1 0
chr2:216678154|216679024 hsa-miR-6853-5p 0 1 0
chr2:216678154|216679024 hsa-miR-6740-5p 1 1 0
chr2:216678154|216679024 hsa-miR-3944-3p 1 0 0
chr2:216678154|216679024 hsa-miR-1229-5p 1 0 0
chr2:216678154|216679024 hsa-miR-296-3p 1 0 0
chr2:216678154|216679024 hsa-miR-4743-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6830-3p 0 1 0
chr2:216678154|216679024 hsa-miR-4787-5p 1 1 0
chr2:216678154|216679024 hsa-miR-4446-3p 1 0 0
chr2:216678154|216679024 hsa-miR-4715-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6781-5p 1 1 0
chr2:216678154|216679024 hsa-miR-3678-3p 0 1 0
chr2:216678154|216679024 hsa-miR-6499-3p 0 1 0
chr2:216678154|216679024 hsa-miR-4638-5p 0 1 0
chr2:216678154|216679024 hsa-miR-3614-3p 0 1 0
chr2:216678154|216679024 hsa-miR-6837-3p 0 1 0
chr2:216678154|216679024 hsa-miR-2277-5p 1 0 0
chr2:216678154|216679024 hsa-miR-3173-5p 0 1 0
chr2:216678154|216679024 hsa-miR-1207-5p 1 0 0
chr2:216678154|216679024 hsa-miR-4763-3p 1 1 0
chr2:216678154|216679024 hsa-miR-6769b-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6775-5p 1 1 0
chr2:216678154|216679024 hsa-miR-5001-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6752-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6803-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6819-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6851-5p 1 0 0
chr2:216678154|216679024 hsa-miR-7110-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6751-5p 1 0 0
chr2:216678154|216679024 hsa-miR-3620-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6780b-5p 1 0 0
chr2:216678154|216679024 hsa-miR-1909-3p 1 1 0
chr2:216678154|216679024 hsa-miR-4632-5p 1 0 0
chr2:216678154|216679024 hsa-miR-4725-3p 0 1 0
chr2:216678154|216679024 hsa-miR-4726-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6846-5p 1 0 0
chr2:216678154|216679024 hsa-miR-3940-5p 1 0 0
chr2:216678154|216679024 hsa-miR-6799-3p 0 1 0
chr2:216678154|216679024 hsa-miR-6791-3p 1 0 0
chr2:216678154|216679024 hsa-miR-6766-5p 1 1 0
chr2:216678154|216679024 hsa-miR-6724-5p 1 0 0
chr2:216678154|216679024 hsa-miR-3144-3p 0 1 0
chr2:216678154|216679024 hsa-miR-103a-1-5p 0 1 0
chr2:216678154|216679024 hsa-miR-5699-3p 0 1 0
chr2:216678154|216679024 hsa-miR-4676-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:216678154|216679024
ORF Type ORF1
Protein Length 69
Nucleotide Length 207
Protein Sequence MKAEAVKKDRRKKLTQSKFVGGAENTAHPRIISAPEMRQESEQGPCRRHMEASLQELKASPRMVPRAVY
Nucleotide Sequence CTGAAGGCTGAAGCAGTGAAGAAGGACCGCAGAAAGAAGCTGACCCAGTCCAAGTTTGTCGGGGGAGCCGAGAACACTGCCCACCCCCGGATCATCTCTGCACCTGAGATGAGACAGGAGTCTGAGCAGGGCCCCTGCCGCAGACACATGGAGGCTTCCCTGCAGGAGCTCAAAGCCAGCCCACGCATGGTGCCCCGTGCTGTGTAC
CircID chr2:216678154|216679024
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MSRAPAADTWRLPCRSSKPAHAWCPVLC
Nucleotide Sequence CTGAGCAGGGCCCCTGCCGCAGACACATGGAGGCTTCCCTGCAGGAGCTCAAAGCCAGCCCACGCATGGTGCCCCGTGCTGTGT
CircID chr2:216678154|216679024
ORF Type ORF3
Protein Length 70
Nucleotide Length 210
Protein Sequence MQGSLHVSAAGALLRLLSHLRCRDDPGVGSVLGSPDKLGLGQLLSAVLLHCFSLQLGDAGVFGPEDLGGV
Nucleotide Sequence CTGCAGGGAAGCCTCCATGTGTCTGCGGCAGGGGCCCTGCTCAGACTCCTGTCTCATCTCAGGTGCAGAGATGATCCGGGGGTGGGCAGTGTTCTCGGCTCCCCCGACAAACTTGGACTGGGTCAGCTTCTTTCTGCGGTCCTTCTTCACTGCTTCAGCCTTCAGCTCGGAGATGCGGGTGTGTTTGGGCCGGAAGATCTTGGGGGAGTA
CircID chr2:216678154|216679024
ORF Type ORF4
Protein Length 77
Nucleotide Length 234
Protein Sequence MRGLALSSCREASMCLRQGPCSDSCLISGAEMIRGWAVFSAPPTNLDWVSFFLRSFFTASAFSSEMRVCLGRKILGE
Nucleotide Sequence ATGCGTGGGCTGGCTTTGAGCTCCTGCAGGGAAGCCTCCATGTGTCTGCGGCAGGGGCCCTGCTCAGACTCCTGTCTCATCTCAGGTGCAGAGATGATCCGGGGGTGGGCAGTGTTCTCGGCTCCCCCGACAAACTTGGACTGGGTCAGCTTCTTTCTGCGGTCCTTCTTCACTGCTTCAGCCTTCAGCTCGGAGATGCGGGTGTGTTTGGGCCGGAAGATCTTGGGGGAGTAG
CircID chr2:216678154|216679024
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MKAEAVKKDRRKKLTQSKFVGGAENTAHPRIISAPEMRQESEQVY
Nucleotide Sequence CTGAAGGCTGAAGCAGTGAAGAAGGACCGCAGAAAGAAGCTGACCCAGTCCAAGTTTGTCGGGGGAGCCGAGAACACTGCCCACCCCCGGATCATCTCTGCACCTGAGATGAGACAGGAGTCTGAGCAGGTGTAC
CircID chr2:216678154|216679024
ORF Type ORF2
Protein Length 58
Nucleotide Length 174
Protein Sequence MLRLLSHLRCRDDPGVGSVLGSPDKLGLGQLLSAVLLHCFSLQLGDAGVFGPEDLGGV
Nucleotide Sequence CTGCTCAGACTCCTGTCTCATCTCAGGTGCAGAGATGATCCGGGGGTGGGCAGTGTTCTCGGCTCCCCCGACAAACTTGGACTGGGTCAGCTTCTTTCTGCGGTCCTTCTTCACTGCTTCAGCCTTCAGCTCGGAGATGCGGGTGTGTTTGGGCCGGAAGATCTTGGGGGAGTA
CircID chr2:216678154|216679024
ORF Type ORF3
Protein Length 46
Nucleotide Length 141
Protein Sequence MIRGWAVFSAPPTNLDWVSFFLRSFFTASAFSSEMRVCLGRKILGE
Nucleotide Sequence ATGATCCGGGGGTGGGCAGTGTTCTCGGCTCCCCCGACAAACTTGGACTGGGTCAGCTTCTTTCTGCGGTCCTTCTTCACTGCTTCAGCCTTCAGCTCGGAGATGCGGGTGTGTTTGGGCCGGAAGATCTTGGGGGAGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab