CircRNA Information

General Information
circRNA Basic Information
CircID chr2:218594984|218595089
Strand -
CircType exon
Host Gene ENSG00000144580.12;
Algorism CIRI2;
Sequence CTGTTTCCCTTCCTTCTCCCATTCTACTCCCAGTCCGGAATGCCACGAGGACCTTAACCTTGTTTCTGGCTTTAGCTGCTAGTTTTCCCAAATCTCAGTGCTTTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:218594984|218595089 hsa-miR-15a-5p 0 0 1
chr2:218594984|218595089 hsa-miR-15a-3p 0 0 1
chr2:218594984|218595089 hsa-miR-15b-5p 0 0 1
chr2:218594984|218595089 hsa-miR-15b-3p 0 0 1
chr2:218594984|218595089 hsa-miR-195-5p 0 0 1
chr2:218594984|218595089 hsa-miR-195-3p 0 0 1
chr2:218594984|218595089 hsa-miR-424-5p 0 0 1
chr2:218594984|218595089 hsa-miR-424-3p 0 0 1
chr2:218594984|218595089 hsa-miR-497-5p 0 0 1
chr2:218594984|218595089 hsa-miR-497-3p 0 0 1
chr2:218594984|218595089 hsa-miR-503-5p 0 0 1
chr2:218594984|218595089 hsa-miR-503-3p 0 0 1
chr2:218594984|218595089 hsa-miR-624-5p 0 0 1
chr2:218594984|218595089 hsa-miR-624-3p 0 0 1
chr2:218594984|218595089 hsa-miR-646 0 0 1
chr2:218594984|218595089 hsa-miR-1204 0 0 1
chr2:218594984|218595089 hsa-miR-1256 0 0 1
chr2:218594984|218595089 hsa-miR-1252-5p 0 0 1
chr2:218594984|218595089 hsa-miR-1252-3p 0 0 1
chr2:218594984|218595089 hsa-miR-16 0 0 1
chr2:218594984|218595089 hsa-miR-762 1 0 0
chr2:218594984|218595089 hsa-miR-765 1 0 0
chr2:218594984|218595089 hsa-miR-298 1 0 0
chr2:218594984|218595089 hsa-miR-1291 1 0 0
chr2:218594984|218595089 hsa-miR-1268a 1 0 0
chr2:218594984|218595089 hsa-miR-2110 1 1 0
chr2:218594984|218595089 hsa-miR-3132 1 0 0
chr2:218594984|218595089 hsa-miR-378b 1 0 0
chr2:218594984|218595089 hsa-miR-3154 1 0 0
chr2:218594984|218595089 hsa-miR-378c 1 1 0
chr2:218594984|218595089 hsa-miR-4270 1 0 0
chr2:218594984|218595089 hsa-miR-1268b 1 0 0
chr2:218594984|218595089 hsa-miR-378e 1 0 0
chr2:218594984|218595089 hsa-miR-378f 1 0 0
chr2:218594984|218595089 hsa-miR-378h 1 0 0
chr2:218594984|218595089 hsa-miR-4505 1 0 0
chr2:218594984|218595089 hsa-miR-2392 1 0 0
chr2:218594984|218595089 hsa-miR-4516 0 1 0
chr2:218594984|218595089 hsa-miR-378i 1 1 0
chr2:218594984|218595089 hsa-miR-4651 1 0 0
chr2:218594984|218595089 hsa-miR-4656 1 0 0
chr2:218594984|218595089 hsa-miR-5703 0 1 0
chr2:218594984|218595089 hsa-miR-5787 1 0 0
chr2:218594984|218595089 hsa-miR-4433b-3p 1 0 0
chr2:218594984|218595089 hsa-miR-671-5p 1 0 0
chr2:218594984|218595089 hsa-miR-7106-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6894-5p 1 0 0
chr2:218594984|218595089 hsa-miR-3192-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6727-5p 1 0 0
chr2:218594984|218595089 hsa-miR-197-5p 1 1 0
chr2:218594984|218595089 hsa-miR-432-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6716-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6871-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6772-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6835-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6740-5p 1 0 0
chr2:218594984|218595089 hsa-miR-4786-3p 1 0 0
chr2:218594984|218595089 hsa-miR-30c-2-3p 0 1 0
chr2:218594984|218595089 hsa-miR-3127-5p 1 0 0
chr2:218594984|218595089 hsa-miR-3202 0 1 0
chr2:218594984|218595089 hsa-miR-4446-3p 1 0 0
chr2:218594984|218595089 hsa-miR-3162-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6878-5p 1 1 0
chr2:218594984|218595089 hsa-miR-605-3p 1 1 0
chr2:218594984|218595089 hsa-miR-1207-5p 1 0 0
chr2:218594984|218595089 hsa-miR-1233-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6778-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6870-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6775-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6803-5p 1 0 0
chr2:218594984|218595089 hsa-miR-7107-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6763-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6779-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6788-5p 1 1 0
chr2:218594984|218595089 hsa-miR-4728-5p 1 0 0
chr2:218594984|218595089 hsa-miR-449c-5p 1 0 0
chr2:218594984|218595089 hsa-miR-4745-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6777-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6889-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6831-5p 0 1 0
chr2:218594984|218595089 hsa-miR-4758-5p 1 0 0
chr2:218594984|218595089 hsa-miR-30c-1-3p 0 1 0
chr2:218594984|218595089 hsa-miR-6758-5p 1 0 0
chr2:218594984|218595089 hsa-miR-4646-5p 1 0 0
chr2:218594984|218595089 hsa-miR-6876-5p 0 1 0
chr2:218594984|218595089 hsa-miR-378a-3p 1 1 0
chr2:218594984|218595089 hsa-miR-378d 1 1 0
chr2:218594984|218595089 hsa-miR-4524b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:218594984|218595089
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MGKLAAKARNKVKVLVAFRTGSRMGEGRET
Nucleotide Sequence TTGGGAAAACTAGCAGCTAAAGCCAGAAACAAGGTTAAGGTCCTCGTGGCATTCCGGACTGGGAGTAGAATGGGAGAAGGAAGGGAAACA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab