CircRNA Information

General Information
circRNA Basic Information
CircID chr2:219182451|219182592
Strand +
CircType exon
Host Gene ENSG00000144567.9;
Algorism CIRI2;
Sequence TGTACCAGAGAATGGATGTCGGGCCCCAGGGGTGGAGCATCAGGGGGTTTTGGCGGTGTCTCTGGCTCCAAGCCCAGCTCTGCATTCAGCTGCTCCAGCTCCCCCTGATCCAGCAACTCAAAGTCCTCAGTGGTGAGTGCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:219182451|219182592 hsa-miR-197-5p 0 0 1
chr2:219182451|219182592 hsa-miR-197-3p 0 0 1
chr2:219182451|219182592 hsa-miR-326 0 0 1
chr2:219182451|219182592 hsa-miR-432-5p 0 0 1
chr2:219182451|219182592 hsa-miR-432-3p 0 0 1
chr2:219182451|219182592 hsa-miR-571 0 1 1
chr2:219182451|219182592 hsa-miR-646 0 1 1
chr2:219182451|219182592 hsa-miR-920 0 1 1
chr2:219182451|219182592 hsa-miR-939-5p 0 0 1
chr2:219182451|219182592 hsa-miR-939-3p 0 0 1
chr2:219182451|219182592 hsa-miR-1287-5p 0 0 1
chr2:219182451|219182592 hsa-miR-1287-3p 0 0 1
chr2:219182451|219182592 hsa-miR-1224-5p 0 0 1
chr2:219182451|219182592 hsa-miR-331-3p 0 1 1
chr2:219182451|219182592 hsa-miR-330-5p 0 0 1
chr2:219182451|219182592 hsa-miR-220b 0 0 1
chr2:219182451|219182592 hsa-miR-219-1-3p 0 0 1
chr2:219182451|219182592 hsa-miR-612 1 0 0
chr2:219182451|219182592 hsa-miR-637 1 0 0
chr2:219182451|219182592 hsa-miR-762 1 0 0
chr2:219182451|219182592 hsa-miR-378c 1 1 0
chr2:219182451|219182592 hsa-miR-4300 0 1 0
chr2:219182451|219182592 hsa-miR-4259 1 1 0
chr2:219182451|219182592 hsa-miR-4292 0 1 0
chr2:219182451|219182592 hsa-miR-378f 1 1 0
chr2:219182451|219182592 hsa-miR-378g 1 1 0
chr2:219182451|219182592 hsa-miR-4429 1 0 0
chr2:219182451|219182592 hsa-miR-3135b 1 1 0
chr2:219182451|219182592 hsa-miR-4487 0 1 0
chr2:219182451|219182592 hsa-miR-1587 1 0 0
chr2:219182451|219182592 hsa-miR-4754 1 0 0
chr2:219182451|219182592 hsa-miR-4785 0 1 0
chr2:219182451|219182592 hsa-miR-5698 0 1 0
chr2:219182451|219182592 hsa-miR-6081 1 0 0
chr2:219182451|219182592 hsa-miR-378j 1 0 0
chr2:219182451|219182592 hsa-miR-6132 1 0 0
chr2:219182451|219182592 hsa-miR-8089 1 0 0
chr2:219182451|219182592 hsa-miR-6749-3p 1 0 0
chr2:219182451|219182592 hsa-miR-504-3p 1 0 0
chr2:219182451|219182592 hsa-miR-6720-5p 1 0 0
chr2:219182451|219182592 hsa-miR-505-5p 0 1 0
chr2:219182451|219182592 hsa-miR-185-3p 1 0 0
chr2:219182451|219182592 hsa-miR-6798-5p 1 1 0
chr2:219182451|219182592 hsa-miR-486-3p 0 1 0
chr2:219182451|219182592 hsa-miR-6858-3p 1 0 0
chr2:219182451|219182592 hsa-miR-1343-3p 1 1 0
chr2:219182451|219182592 hsa-miR-6772-3p 1 0 0
chr2:219182451|219182592 hsa-miR-4640-3p 0 1 0
chr2:219182451|219182592 hsa-miR-3678-3p 0 1 0
chr2:219182451|219182592 hsa-miR-605-5p 0 1 0
chr2:219182451|219182592 hsa-miR-1296-5p 1 0 0
chr2:219182451|219182592 hsa-miR-7158-5p 1 0 0
chr2:219182451|219182592 hsa-miR-4763-3p 1 0 0
chr2:219182451|219182592 hsa-miR-6870-5p 0 1 0
chr2:219182451|219182592 hsa-miR-5001-5p 1 1 0
chr2:219182451|219182592 hsa-miR-6726-5p 0 1 0
chr2:219182451|219182592 hsa-miR-6851-5p 1 0 0
chr2:219182451|219182592 hsa-miR-6722-3p 1 0 0
chr2:219182451|219182592 hsa-miR-3620-5p 1 0 0
chr2:219182451|219182592 hsa-miR-10396a-5p 1 0 0
chr2:219182451|219182592 hsa-miR-10396b-5p 1 0 0
chr2:219182451|219182592 hsa-miR-328-5p 1 1 0
chr2:219182451|219182592 hsa-miR-4685-5p 1 0 0
chr2:219182451|219182592 hsa-miR-4745-5p 1 0 0
chr2:219182451|219182592 hsa-miR-6794-5p 0 1 0
chr2:219182451|219182592 hsa-miR-378a-3p 1 1 0
chr2:219182451|219182592 hsa-miR-6791-5p 1 1 0
chr2:219182451|219182592 hsa-miR-6500-5p 1 0 0
chr2:219182451|219182592 hsa-miR-6771-3p 0 1 0
chr2:219182451|219182592 hsa-miR-378d 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr2:219182451|219182592
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MSGPRGGASGGFGGVSGSKPSSAFSCSSSP
Nucleotide Sequence ATGTCGGGCCCCAGGGGTGGAGCATCAGGGGGTTTTGGCGGTGTCTCTGGCTCCAAGCCCAGCTCTGCATTCAGCTGCTCCAGCTCCCCCTGA

CircID chr2:219182451|219182592
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MAVSLAPSPALHSAAPAPPDPATQSPQW
Nucleotide Sequence TTGGCGGTGTCTCTGGCTCCAAGCCCAGCTCTGCATTCAGCTGCTCCAGCTCCCCCTGATCCAGCAACTCAAAGTCCTCAGTGGTGA

CircID chr2:219182451|219182592
ORF Type ORF3
Protein Length 43
Nucleotide Length 129
Protein Sequence MDVGPQGWSIRGFWRCLWLQAQLCIQLLQLPLIQQLKVLSGEC
Nucleotide Sequence ATGGATGTCGGGCCCCAGGGGTGGAGCATCAGGGGGTTTTGGCGGTGTCTCTGGCTCCAAGCCCAGCTCTGCATTCAGCTGCTCCAGCTCCCCCTGATCCAGCAACTCAAAGTCCTCAGTGGTGAGTGC

CircID chr2:219182451|219182592
ORF Type ORF4
Protein Length 28
Nucleotide Length 84
Protein Sequence MQSWAWSQRHRQNPLMLHPWGPTSILWY
Nucleotide Sequence ATGCAGAGCTGGGCTTGGAGCCAGAGACACCGCCAAAACCCCCTGATGCTCCACCCCTGGGGCCCGACATCCATTCTCTGGTAC

CircID chr2:219182451|219182592
ORF Type ORF5
Protein Length 38
Nucleotide Length 114
Protein Sequence MLDQGELEQLNAELGLEPETPPKPPDAPPLGPDIHSLV
Nucleotide Sequence TTGCTGGATCAGGGGGAGCTGGAGCAGCTGAATGCAGAGCTGGGCTTGGAGCCAGAGACACCGCCAAAACCCCCTGATGCTCCACCCCTGGGGCCCGACATCCATTCTCTGGTA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites