CircRNA Information

General Information
circRNA Basic Information
CircID chr2:219282888|219283443
Strand +
CircType exon
Host Gene ENSG00000135924.14;
Algorism CIRI2;
Sequence CCGCTCCTGCCCGTTCTCCATGATTCTGCGTGTGGTGATGCGGCGTCCTTGGACAAAGGTGGTAGATGTAGAAACAGAGCGAAAAGCACCAGCCCCAGGACTGAAGGAGAAAGATGAGGAGGAGAAATCTGGCATCGGGACAAGGGAGGAGGAGGAGAGGTGGTTAGAAGAAGACTGCGCTGCCTGTTGTGGTCACCGAGGCTCCAGGCCGCCTCGCAGGGCTGCTGGAGGCAGGGCTCCCAACACAGGAGACAGGCTTGGAAAAGCAACAAGCTCAAGCCAGGGGTTCCAGGAATCGGAGCTTGCAAACGTGGGAAGGGGCAGAACTTACCGGAGTGCCCAGGGAAGGAGGAAGAGAAGGTAAAGAAGGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:219282888|219283443 hsa-miR-197-5p 0 0 1
chr2:219282888|219283443 hsa-miR-197-3p 0 0 1
chr2:219282888|219283443 hsa-miR-205-5p 0 0 1
chr2:219282888|219283443 hsa-miR-205-3p 0 0 1
chr2:219282888|219283443 hsa-miR-612 1 0 1
chr2:219282888|219283443 hsa-miR-623 0 0 1
chr2:219282888|219283443 hsa-miR-662 0 1 1
chr2:219282888|219283443 hsa-miR-766-5p 0 0 1
chr2:219282888|219283443 hsa-miR-766-3p 0 0 1
chr2:219282888|219283443 hsa-miR-920 0 0 1
chr2:219282888|219283443 hsa-miR-942-5p 0 0 1
chr2:219282888|219283443 hsa-miR-942-3p 0 0 1
chr2:219282888|219283443 hsa-miR-1234-3p 0 0 1
chr2:219282888|219283443 hsa-miR-1236-5p 0 0 1
chr2:219282888|219283443 hsa-miR-1236-3p 0 0 1
chr2:219282888|219283443 hsa-miR-1248 0 1 1
chr2:219282888|219283443 hsa-miR-1282 0 0 1
chr2:219282888|219283443 hsa-miR-1234 0 0 1
chr2:219282888|219283443 hsa-miR-885-3p 0 1 1
chr2:219282888|219283443 hsa-miR-490-5p 0 0 1
chr2:219282888|219283443 hsa-miR-331-3p 0 0 1
chr2:219282888|219283443 hsa-miR-188-3p 0 0 1
chr2:219282888|219283443 hsa-miR-338-3p 0 0 1
chr2:219282888|219283443 hsa-miR-324-3p 0 0 1
chr2:219282888|219283443 hsa-miR-455-3p 0 0 1
chr2:219282888|219283443 hsa-miR-450b-5p 0 0 1
chr2:219282888|219283443 hsa-miR-220b 0 0 1
chr2:219282888|219283443 hsa-miR-1260 0 0 1
chr2:219282888|219283443 hsa-miR-1274a 0 0 1
chr2:219282888|219283443 hsa-miR-1233 0 0 1
chr2:219282888|219283443 hsa-miR-138 0 0 1
chr2:219282888|219283443 hsa-miR-1285 0 0 1
chr2:219282888|219283443 hsa-miR-1254 0 0 1
chr2:219282888|219283443 hsa-miR-637 1 0 0
chr2:219282888|219283443 hsa-miR-661 1 0 0
chr2:219282888|219283443 hsa-miR-663a 1 0 0
chr2:219282888|219283443 hsa-miR-1264 0 1 0
chr2:219282888|219283443 hsa-miR-1281 1 0 0
chr2:219282888|219283443 hsa-miR-1471 1 0 0
chr2:219282888|219283443 hsa-miR-1913 1 1 0
chr2:219282888|219283443 hsa-miR-4254 0 1 0
chr2:219282888|219283443 hsa-miR-4268 1 0 0
chr2:219282888|219283443 hsa-miR-4279 0 1 0
chr2:219282888|219283443 hsa-miR-4421 0 1 0
chr2:219282888|219283443 hsa-miR-4440 1 0 0
chr2:219282888|219283443 hsa-miR-4449 1 0 0
chr2:219282888|219283443 hsa-miR-4469 1 0 0
chr2:219282888|219283443 hsa-miR-4508 1 0 0
chr2:219282888|219283443 hsa-miR-4692 0 1 0
chr2:219282888|219283443 hsa-miR-5193 1 1 0
chr2:219282888|219283443 hsa-miR-6860 0 1 0
chr2:219282888|219283443 hsa-miR-9899 1 0 0
chr2:219282888|219283443 hsa-miR-11399 1 0 0
chr2:219282888|219283443 hsa-miR-6749-3p 1 1 0
chr2:219282888|219283443 hsa-miR-214-5p 0 1 0
chr2:219282888|219283443 hsa-miR-18a-3p 1 0 0
chr2:219282888|219283443 hsa-miR-6747-3p 0 1 0
chr2:219282888|219283443 hsa-miR-6836-3p 0 1 0
chr2:219282888|219283443 hsa-miR-671-5p 1 0 0
chr2:219282888|219283443 hsa-miR-1233-3p 1 1 0
chr2:219282888|219283443 hsa-miR-6892-3p 1 0 0
chr2:219282888|219283443 hsa-miR-210-5p 1 0 0
chr2:219282888|219283443 hsa-miR-6881-3p 1 1 0
chr2:219282888|219283443 hsa-miR-145-3p 0 1 0
chr2:219282888|219283443 hsa-miR-6875-3p 1 1 0
chr2:219282888|219283443 hsa-miR-6721-5p 0 1 0
chr2:219282888|219283443 hsa-miR-1915-5p 1 0 0
chr2:219282888|219283443 hsa-miR-6832-3p 1 0 0
chr2:219282888|219283443 hsa-miR-6845-3p 1 1 0
chr2:219282888|219283443 hsa-miR-877-3p 1 1 0
chr2:219282888|219283443 hsa-miR-185-3p 1 1 0
chr2:219282888|219283443 hsa-miR-4655-3p 1 0 0
chr2:219282888|219283443 hsa-miR-4753-3p 1 1 0
chr2:219282888|219283443 hsa-miR-6740-3p 1 0 0
chr2:219282888|219283443 hsa-miR-4436b-5p 1 0 0
chr2:219282888|219283443 hsa-miR-1343-3p 1 1 0
chr2:219282888|219283443 hsa-miR-939-3p 1 1 0
chr2:219282888|219283443 hsa-miR-5001-3p 1 1 0
chr2:219282888|219283443 hsa-miR-3667-3p 1 0 0
chr2:219282888|219283443 hsa-miR-6749-5p 1 0 0
chr2:219282888|219283443 hsa-miR-6809-3p 1 1 0
chr2:219282888|219283443 hsa-miR-7111-3p 1 1 0
chr2:219282888|219283443 hsa-miR-6830-3p 1 0 0
chr2:219282888|219283443 hsa-miR-2681-3p 0 1 0
chr2:219282888|219283443 hsa-miR-6776-3p 1 1 0
chr2:219282888|219283443 hsa-miR-339-5p 0 1 0
chr2:219282888|219283443 hsa-miR-3189-3p 1 0 0
chr2:219282888|219283443 hsa-miR-7112-5p 1 1 0
chr2:219282888|219283443 hsa-miR-6870-3p 1 0 0
chr2:219282888|219283443 hsa-miR-887-5p 0 1 0
chr2:219282888|219283443 hsa-miR-1237-3p 1 0 0
chr2:219282888|219283443 hsa-miR-4664-3p 1 0 0
chr2:219282888|219283443 hsa-miR-1910-5p 1 1 0
chr2:219282888|219283443 hsa-miR-1224-3p 1 1 0
chr2:219282888|219283443 hsa-miR-6741-3p 1 0 0
chr2:219282888|219283443 hsa-miR-6752-3p 0 1 0
chr2:219282888|219283443 hsa-miR-6758-3p 1 0 0
chr2:219282888|219283443 hsa-miR-6886-3p 1 0 0
chr2:219282888|219283443 hsa-miR-5088-3p 1 1 0
chr2:219282888|219283443 hsa-miR-6738-3p 0 1 0
chr2:219282888|219283443 hsa-miR-6880-3p 1 0 0
chr2:219282888|219283443 hsa-miR-3124-3p 0 1 0
chr2:219282888|219283443 hsa-miR-130b-5p 1 1 0
chr2:219282888|219283443 hsa-miR-1229-3p 1 0 0
chr2:219282888|219283443 hsa-miR-3173-5p 0 1 0
chr2:219282888|219283443 hsa-miR-6779-3p 0 1 0
chr2:219282888|219283443 hsa-miR-6734-3p 1 1 0
chr2:219282888|219283443 hsa-miR-6838-3p 0 1 0
chr2:219282888|219283443 hsa-miR-6780b-3p 0 1 0
chr2:219282888|219283443 hsa-miR-6800-3p 0 1 0
chr2:219282888|219283443 hsa-miR-4652-3p 1 0 0
chr2:219282888|219283443 hsa-miR-6808-3p 1 0 0
chr2:219282888|219283443 hsa-miR-4423-5p 1 0 0
chr2:219282888|219283443 hsa-miR-6813-5p 1 0 0
chr2:219282888|219283443 hsa-miR-7107-5p 0 1 0
chr2:219282888|219283443 hsa-miR-3127-3p 1 1 0
chr2:219282888|219283443 hsa-miR-320a-5p 1 1 0
chr2:219282888|219283443 hsa-miR-4685-3p 1 0 0
chr2:219282888|219283443 hsa-miR-6754-3p 1 0 0
chr2:219282888|219283443 hsa-miR-6799-3p 0 1 0
chr2:219282888|219283443 hsa-miR-6791-3p 1 0 0
chr2:219282888|219283443 hsa-miR-2682-3p 1 0 0
chr2:219282888|219283443 hsa-miR-6791-5p 1 1 0
chr2:219282888|219283443 hsa-miR-6756-3p 1 1 0
chr2:219282888|219283443 hsa-miR-6792-3p 1 0 0
chr2:219282888|219283443 hsa-miR-6810-3p 1 0 0
chr2:219282888|219283443 hsa-miR-11181-5p 1 1 0
chr2:219282888|219283443 hsa-miR-4723-3p 1 1 0
chr2:219282888|219283443 hsa-miR-483-3p 1 0 0
chr2:219282888|219283443 hsa-miR-6511b-3p 1 0 0
chr2:219282888|219283443 hsa-miR-6529-3p 1 0 0
chr2:219282888|219283443 hsa-miR-6891-3p 1 1 0
chr2:219282888|219283443 hsa-miR-6783-3p 1 1 0
chr2:219282888|219283443 hsa-miR-6781-3p 1 0 0
chr2:219282888|219283443 hsa-miR-6827-3p 1 0 0
chr2:219282888|219283443 hsa-miR-5699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:219282888|219283443
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MPVLHDSACGDAASLDKGGRCRNRAKSTSPRTEGER
Nucleotide Sequence CTGCCCGTTCTCCATGATTCTGCGTGTGGTGATGCGGCGTCCTTGGACAAAGGTGGTAGATGTAGAAACAGAGCGAAAAGCACCAGCCCCAGGACTGAAGGAGAAAGATGA
CircID chr2:219282888|219283443
ORF Type ORF2
Protein Length 66
Nucleotide Length 198
Protein Sequence MRCLLWSPRLQAASQGCWRQGSQHRRQAWKSNKLKPGVPGIGACKRGKGQNLPECPGKEEEKVKKG
Nucleotide Sequence CTGCGCTGCCTGTTGTGGTCACCGAGGCTCCAGGCCGCCTCGCAGGGCTGCTGGAGGCAGGGCTCCCAACACAGGAGACAGGCTTGGAAAAGCAACAAGCTCAAGCCAGGGGTTCCAGGAATCGGAGCTTGCAAACGTGGGAAGGGGCAGAACTTACCGGAGTGCCCAGGGAAGGAGGAAGAGAAGGTAAAGAAGGGG
CircID chr2:219282888|219283443
ORF Type ORF3
Protein Length 114
Nucleotide Length 345
Protein Sequence MILRVVMRRPWTKVVDVETERKAPAPGLKEKDEEEKSGIGTREEEERWLEEDCAACCGHRGSRPPRRAAGGRAPNTGDRLGKATSSSQGFQESELANVGRGRTYRSAQGRRKRR
Nucleotide Sequence ATGATTCTGCGTGTGGTGATGCGGCGTCCTTGGACAAAGGTGGTAGATGTAGAAACAGAGCGAAAAGCACCAGCCCCAGGACTGAAGGAGAAAGATGAGGAGGAGAAATCTGGCATCGGGACAAGGGAGGAGGAGGAGAGGTGGTTAGAAGAAGACTGCGCTGCCTGTTGTGGTCACCGAGGCTCCAGGCCGCCTCGCAGGGCTGCTGGAGGCAGGGCTCCCAACACAGGAGACAGGCTTGGAAAAGCAACAAGCTCAAGCCAGGGGTTCCAGGAATCGGAGCTTGCAAACGTGGGAAGGGGCAGAACTTACCGGAGTGCCCAGGGAAGGAGGAAGAGAAGGTAA
CircID chr2:219282888|219283443
ORF Type ORF4
Protein Length 64
Nucleotide Length 192
Protein Sequence MPVVVTEAPGRLAGLLEAGLPTQETGLEKQQAQARGSRNRSLQTWEGAELTGVPREGGREGKEG
Nucleotide Sequence CTGCCTGTTGTGGTCACCGAGGCTCCAGGCCGCCTCGCAGGGCTGCTGGAGGCAGGGCTCCCAACACAGGAGACAGGCTTGGAAAAGCAACAAGCTCAAGCCAGGGGTTCCAGGAATCGGAGCTTGCAAACGTGGGAAGGGGCAGAACTTACCGGAGTGCCCAGGGAAGGAGGAAGAGAAGGTAAAGAAGGG
CircID chr2:219282888|219283443
ORF Type ORF5
Protein Length 43
Nucleotide Length 132
Protein Sequence MPLPTFASSDSWNPWLELVAFPSLSPVLGALPPAALRGGLEPR
Nucleotide Sequence CTGCCCCTTCCCACGTTTGCAAGCTCCGATTCCTGGAACCCCTGGCTTGAGCTTGTTGCTTTTCCAAGCCTGTCTCCTGTGTTGGGAGCCCTGCCTCCAGCAGCCCTGCGAGGCGGCCTGGAGCCTCGGTGA
CircID chr2:219282888|219283443
ORF Type ORF6
Protein Length 45
Nucleotide Length 135
Protein Sequence MPDFSSSSFSFSPGAGAFRSVSTSTTFVQGRRITTRRIMENGQER
Nucleotide Sequence ATGCCAGATTTCTCCTCCTCATCTTTCTCCTTCAGTCCTGGGGCTGGTGCTTTTCGCTCTGTTTCTACATCTACCACCTTTGTCCAAGGACGCCGCATCACCACACGCAGAATCATGGAGAACGGGCAGGAGCGG
CircID chr2:219282888|219283443
ORF Type ORF7
Protein Length 102
Nucleotide Length 306
Protein Sequence MQAPIPGTPGLSLLLFQACLLCWEPCLQQPCEAAWSLGDHNRQRSLLLTTSPPPPLSRCQISPPHLSPSVLGLVLFALFLHLPPLSKDAASPHAESWRTGRS
Nucleotide Sequence TTGCAAGCTCCGATTCCTGGAACCCCTGGCTTGAGCTTGTTGCTTTTCCAAGCCTGTCTCCTGTGTTGGGAGCCCTGCCTCCAGCAGCCCTGCGAGGCGGCCTGGAGCCTCGGTGACCACAACAGGCAGCGCAGTCTTCTTCTAACCACCTCTCCTCCTCCTCCCTTGTCCCGATGCCAGATTTCTCCTCCTCATCTTTCTCCTTCAGTCCTGGGGCTGGTGCTTTTCGCTCTGTTTCTACATCTACCACCTTTGTCCAAGGACGCCGCATCACCACACGCAGAATCATGGAGAACGGGCAGGAGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab