CircRNA Information

General Information
circRNA Basic Information
CircID chr2:219426081|219426208
Strand -
CircType exon
Host Gene ENSG00000175084.10;
Algorism CIRI2;
Sequence CCAGCCTCAGTCCTCCCCTCACAGCCTCTGACCCCTCCTCACTGGCCATCCCTCGTGGTCCCCAACAGCGACATAGCCCATCCCTGCCTGGTCACAGGGCATGCCCCGGCCACCTCTGCGGACCCCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:219426081|219426208 hsa-miR-874-5p 0 0 1
chr2:219426081|219426208 hsa-miR-874-3p 0 0 1
chr2:219426081|219426208 hsa-miR-940 0 0 1
chr2:219426081|219426208 hsa-miR-1294 0 0 1
chr2:219426081|219426208 hsa-miR-615-5p 1 1 1
chr2:219426081|219426208 hsa-miR-485-5p 0 0 1
chr2:219426081|219426208 hsa-miR-146b-3p 0 0 1
chr2:219426081|219426208 hsa-miR-423-5p 1 0 1
chr2:219426081|219426208 hsa-miR-1207-5p 1 1 1
chr2:219426081|219426208 hsa-miR-608 1 1 0
chr2:219426081|219426208 hsa-miR-638 1 0 0
chr2:219426081|219426208 hsa-miR-663a 1 0 0
chr2:219426081|219426208 hsa-miR-658 1 0 0
chr2:219426081|219426208 hsa-miR-762 1 0 0
chr2:219426081|219426208 hsa-miR-663b 1 0 0
chr2:219426081|219426208 hsa-miR-1538 1 0 0
chr2:219426081|219426208 hsa-miR-3138 1 0 0
chr2:219426081|219426208 hsa-miR-3141 1 0 0
chr2:219426081|219426208 hsa-miR-3147 1 0 0
chr2:219426081|219426208 hsa-miR-3188 1 0 0
chr2:219426081|219426208 hsa-miR-4322 1 0 0
chr2:219426081|219426208 hsa-miR-4257 1 1 0
chr2:219426081|219426208 hsa-miR-4253 0 1 0
chr2:219426081|219426208 hsa-miR-3937 1 0 0
chr2:219426081|219426208 hsa-miR-1268b 1 0 0
chr2:219426081|219426208 hsa-miR-4492 1 0 0
chr2:219426081|219426208 hsa-miR-4498 1 0 0
chr2:219426081|219426208 hsa-miR-2392 1 0 0
chr2:219426081|219426208 hsa-miR-4508 1 0 0
chr2:219426081|219426208 hsa-miR-4514 1 1 0
chr2:219426081|219426208 hsa-miR-4651 1 1 0
chr2:219426081|219426208 hsa-miR-4656 1 0 0
chr2:219426081|219426208 hsa-miR-4669 1 0 0
chr2:219426081|219426208 hsa-miR-4673 0 1 0
chr2:219426081|219426208 hsa-miR-4688 1 0 0
chr2:219426081|219426208 hsa-miR-4689 1 0 0
chr2:219426081|219426208 hsa-miR-4692 0 1 0
chr2:219426081|219426208 hsa-miR-4706 1 0 0
chr2:219426081|219426208 hsa-miR-4710 1 0 0
chr2:219426081|219426208 hsa-miR-4736 1 0 0
chr2:219426081|219426208 hsa-miR-4739 1 0 0
chr2:219426081|219426208 hsa-miR-4741 1 0 0
chr2:219426081|219426208 hsa-miR-4784 1 0 0
chr2:219426081|219426208 hsa-miR-5090 0 1 0
chr2:219426081|219426208 hsa-miR-5194 1 1 0
chr2:219426081|219426208 hsa-miR-5698 1 0 0
chr2:219426081|219426208 hsa-miR-5787 1 0 0
chr2:219426081|219426208 hsa-miR-6085 1 0 0
chr2:219426081|219426208 hsa-miR-6086 1 0 0
chr2:219426081|219426208 hsa-miR-6127 1 0 0
chr2:219426081|219426208 hsa-miR-6132 1 0 0
chr2:219426081|219426208 hsa-miR-6133 1 0 0
chr2:219426081|219426208 hsa-miR-7704 1 0 0
chr2:219426081|219426208 hsa-miR-7974 1 0 0
chr2:219426081|219426208 hsa-miR-8052 1 0 0
chr2:219426081|219426208 hsa-miR-8089 1 0 0
chr2:219426081|219426208 hsa-miR-12119 1 0 0
chr2:219426081|219426208 hsa-miR-12128 1 1 0
chr2:219426081|219426208 hsa-miR-4433b-3p 1 0 0
chr2:219426081|219426208 hsa-miR-92a-1-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6734-5p 1 1 0
chr2:219426081|219426208 hsa-miR-4433a-3p 1 0 0
chr2:219426081|219426208 hsa-miR-6765-5p 1 1 0
chr2:219426081|219426208 hsa-miR-125b-1-3p 1 0 0
chr2:219426081|219426208 hsa-miR-3150a-3p 1 0 0
chr2:219426081|219426208 hsa-miR-7106-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6825-5p 1 1 0
chr2:219426081|219426208 hsa-miR-6894-5p 1 1 0
chr2:219426081|219426208 hsa-miR-6857-5p 1 0 0
chr2:219426081|219426208 hsa-miR-4687-3p 1 0 0
chr2:219426081|219426208 hsa-miR-27a-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6799-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6728-5p 1 0 0
chr2:219426081|219426208 hsa-miR-4786-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6089 1 0 0
chr2:219426081|219426208 hsa-miR-6757-5p 1 1 0
chr2:219426081|219426208 hsa-miR-4695-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6806-5p 1 0 0
chr2:219426081|219426208 hsa-miR-3187-3p 1 0 0
chr2:219426081|219426208 hsa-miR-6721-5p 1 0 0
chr2:219426081|219426208 hsa-miR-4655-5p 1 0 0
chr2:219426081|219426208 hsa-miR-197-5p 1 0 0
chr2:219426081|219426208 hsa-miR-7108-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6742-5p 1 0 0
chr2:219426081|219426208 hsa-miR-3180-3p 1 0 0
chr2:219426081|219426208 hsa-miR-6748-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6796-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6732-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6827-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6881-5p 1 0 0
chr2:219426081|219426208 hsa-miR-2467-3p 1 1 0
chr2:219426081|219426208 hsa-miR-6782-5p 1 0 0
chr2:219426081|219426208 hsa-miR-3150b-3p 1 0 0
chr2:219426081|219426208 hsa-miR-6810-5p 1 1 0
chr2:219426081|219426208 hsa-miR-6786-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6835-5p 1 0 0
chr2:219426081|219426208 hsa-miR-5088-5p 1 0 0
chr2:219426081|219426208 hsa-miR-7109-5p 0 1 0
chr2:219426081|219426208 hsa-miR-6853-5p 1 0 0
chr2:219426081|219426208 hsa-miR-1229-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6784-5p 1 0 0
chr2:219426081|219426208 hsa-miR-4640-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6753-5p 1 0 0
chr2:219426081|219426208 hsa-miR-1908-5p 1 0 0
chr2:219426081|219426208 hsa-miR-296-3p 1 0 0
chr2:219426081|219426208 hsa-miR-6771-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6823-5p 1 0 0
chr2:219426081|219426208 hsa-miR-92b-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6847-5p 1 0 0
chr2:219426081|219426208 hsa-miR-4446-3p 1 0 0
chr2:219426081|219426208 hsa-miR-149-3p 1 1 0
chr2:219426081|219426208 hsa-miR-6781-5p 1 0 0
chr2:219426081|219426208 hsa-miR-5010-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6866-5p 1 0 0
chr2:219426081|219426208 hsa-miR-3191-3p 1 0 0
chr2:219426081|219426208 hsa-miR-1911-3p 0 1 0
chr2:219426081|219426208 hsa-miR-744-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6801-5p 1 1 0
chr2:219426081|219426208 hsa-miR-3144-5p 0 1 0
chr2:219426081|219426208 hsa-miR-1233-5p 1 0 0
chr2:219426081|219426208 hsa-miR-4763-3p 1 1 0
chr2:219426081|219426208 hsa-miR-6778-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6787-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6816-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6865-5p 0 1 0
chr2:219426081|219426208 hsa-miR-6893-5p 0 1 0
chr2:219426081|219426208 hsa-miR-6775-5p 1 1 0
chr2:219426081|219426208 hsa-miR-6737-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6743-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6752-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6754-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6756-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6813-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6819-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6851-5p 1 0 0
chr2:219426081|219426208 hsa-miR-7110-5p 1 0 0
chr2:219426081|219426208 hsa-miR-11181-3p 1 0 0
chr2:219426081|219426208 hsa-miR-1249-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6722-3p 1 1 0
chr2:219426081|219426208 hsa-miR-6763-5p 1 1 0
chr2:219426081|219426208 hsa-miR-6779-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6780a-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6797-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6808-5p 1 1 0
chr2:219426081|219426208 hsa-miR-6875-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6879-5p 1 0 0
chr2:219426081|219426208 hsa-miR-7111-5p 1 0 0
chr2:219426081|219426208 hsa-miR-3620-5p 1 0 0
chr2:219426081|219426208 hsa-miR-4728-5p 1 1 0
chr2:219426081|219426208 hsa-miR-5196-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6780b-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6862-5p 0 1 0
chr2:219426081|219426208 hsa-miR-1909-3p 1 0 0
chr2:219426081|219426208 hsa-miR-328-5p 1 0 0
chr2:219426081|219426208 hsa-miR-4725-3p 1 0 0
chr2:219426081|219426208 hsa-miR-4726-5p 1 0 0
chr2:219426081|219426208 hsa-miR-4745-5p 1 0 0
chr2:219426081|219426208 hsa-miR-4749-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6738-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6795-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6846-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6858-5p 1 1 0
chr2:219426081|219426208 hsa-miR-6883-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6887-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6845-5p 1 0 0
chr2:219426081|219426208 hsa-miR-4758-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6511a-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6856-5p 1 0 0
chr2:219426081|219426208 hsa-miR-1914-3p 1 1 0
chr2:219426081|219426208 hsa-miR-6891-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6785-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6762-5p 1 0 0
chr2:219426081|219426208 hsa-miR-10400-3p 1 0 0
chr2:219426081|219426208 hsa-miR-6718-5p 1 0 0
chr2:219426081|219426208 hsa-miR-6884-5p 1 1 0
chr2:219426081|219426208 hsa-miR-135a-2-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:219426081|219426208
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MTPPHWPSLVVPNSDIAHPCLVTGHAPATSADP
Nucleotide Sequence CTGACCCCTCCTCACTGGCCATCCCTCGTGGTCCCCAACAGCGACATAGCCCATCCCTGCCTGGTCACAGGGCATGCCCCGGCCACCTCTGCGGACCCC
CircID chr2:219426081|219426208
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MAIPRGPQQRHSPSLPGHRACPGHLCGPQ
Nucleotide Sequence CTGGCCATCCCTCGTGGTCCCCAACAGCGACATAGCCCATCCCTGCCTGGTCACAGGGCATGCCCCGGCCACCTCTGCGGACCCCAG
CircID chr2:219426081|219426208
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence LGSAEVAGACPVTRQGWAMSLLGTTRDGQ
Nucleotide Sequence CTGGGGTCCGCAGAGGTGGCCGGGGCATGCCCTGTGACCAGGCAGGGATGGGCTATGTCGCTGTTGGGGACCACGAGGGATGGCCAGTGA
CircID chr2:219426081|219426208
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MPCDQAGMGYVAVGDHEGWPVRRGQRL
Nucleotide Sequence ATGCCCTGTGACCAGGCAGGGATGGGCTATGTCGCTGTTGGGGACCACGAGGGATGGCCAGTGAGGAGGGGTCAGAGGCTGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab