CircRNA Information

General Information
circRNA Basic Information
CircID chr2:219506025|219506323
Strand +
CircType exon
Host Gene ENSG00000144591.16;
Algorism CIRI2;
Sequence CCTCCACGCGGGCCCAGCGTCCCACGGTGCTCCCCCAGCCCACGATGCTATGCAGAACACACGTGTGCTCCTGCCAAAGAGGACAGTGAAAGGTAAGGGGAAGAGGCAGGAGGCAGCAGGAACCGGAGGGTGTGAGGTGTGGCCAGATGCAGAGCCCACGGCGTTCACCCTTCTCTGTTCTTGGGGGGATGCCTGGGCCCTCCCCGCAGCCTCTTGGGGTGTCACATGCTGCTGTGTATGCTGGTACCTACCTGCAAAGTGGCTCCATGGAGGACGATGCTCTCCCGGAGCCGCACACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:219506025|219506323 hsa-miR-15a-5p 0 0 1
chr2:219506025|219506323 hsa-miR-15a-3p 0 0 1
chr2:219506025|219506323 hsa-miR-96-5p 0 0 1
chr2:219506025|219506323 hsa-miR-96-3p 0 0 1
chr2:219506025|219506323 hsa-miR-107 0 0 1
chr2:219506025|219506323 hsa-miR-182-5p 0 0 1
chr2:219506025|219506323 hsa-miR-182-3p 0 0 1
chr2:219506025|219506323 hsa-miR-15b-5p 0 0 1
chr2:219506025|219506323 hsa-miR-15b-3p 0 0 1
chr2:219506025|219506323 hsa-miR-195-5p 0 0 1
chr2:219506025|219506323 hsa-miR-195-3p 0 0 1
chr2:219506025|219506323 hsa-miR-370-5p 0 0 1
chr2:219506025|219506323 hsa-miR-370-3p 0 0 1
chr2:219506025|219506323 hsa-miR-424-5p 0 0 1
chr2:219506025|219506323 hsa-miR-424-3p 0 0 1
chr2:219506025|219506323 hsa-miR-497-5p 0 0 1
chr2:219506025|219506323 hsa-miR-497-3p 0 0 1
chr2:219506025|219506323 hsa-miR-588 0 0 1
chr2:219506025|219506323 hsa-miR-604 0 0 1
chr2:219506025|219506323 hsa-miR-625-5p 0 0 1
chr2:219506025|219506323 hsa-miR-625-3p 0 0 1
chr2:219506025|219506323 hsa-miR-634 0 0 1
chr2:219506025|219506323 hsa-miR-637 0 1 1
chr2:219506025|219506323 hsa-miR-657 0 0 1
chr2:219506025|219506323 hsa-miR-1271-5p 0 0 1
chr2:219506025|219506323 hsa-miR-1271-3p 0 0 1
chr2:219506025|219506323 hsa-miR-147b-5p 0 0 1
chr2:219506025|219506323 hsa-miR-147b-3p 0 0 1
chr2:219506025|219506323 hsa-miR-744-5p 0 0 1
chr2:219506025|219506323 hsa-miR-744-3p 0 0 1
chr2:219506025|219506323 hsa-miR-760 0 1 1
chr2:219506025|219506323 hsa-miR-939-5p 0 0 1
chr2:219506025|219506323 hsa-miR-939-3p 0 0 1
chr2:219506025|219506323 hsa-miR-1228-5p 0 0 1
chr2:219506025|219506323 hsa-miR-1228-3p 0 0 1
chr2:219506025|219506323 hsa-miR-1236-5p 0 0 1
chr2:219506025|219506323 hsa-miR-1236-3p 0 0 1
chr2:219506025|219506323 hsa-miR-1208 0 0 1
chr2:219506025|219506323 hsa-miR-1275 0 0 1
chr2:219506025|219506323 hsa-miR-296-5p 0 0 1
chr2:219506025|219506323 hsa-miR-485-5p 0 0 1
chr2:219506025|219506323 hsa-miR-324-5p 0 1 1
chr2:219506025|219506323 hsa-miR-671-3p 0 0 1
chr2:219506025|219506323 hsa-miR-338-3p 0 0 1
chr2:219506025|219506323 hsa-miR-1207-5p 1 0 1
chr2:219506025|219506323 hsa-miR-342-3p 0 0 1
chr2:219506025|219506323 hsa-miR-542-3p 0 0 1
chr2:219506025|219506323 hsa-miR-103 0 0 1
chr2:219506025|219506323 hsa-miR-16 0 0 1
chr2:219506025|219506323 hsa-miR-9 0 0 1
chr2:219506025|219506323 hsa-miR-153 0 0 1
chr2:219506025|219506323 hsa-miR-544 0 0 1
chr2:219506025|219506323 hsa-miR-220a 0 0 1
chr2:219506025|219506323 hsa-miR-663a 1 0 0
chr2:219506025|219506323 hsa-miR-762 1 1 0
chr2:219506025|219506323 hsa-miR-665 1 1 0
chr2:219506025|219506323 hsa-miR-1281 1 0 0
chr2:219506025|219506323 hsa-miR-1976 1 1 0
chr2:219506025|219506323 hsa-miR-2117 0 1 0
chr2:219506025|219506323 hsa-miR-4322 1 1 0
chr2:219506025|219506323 hsa-miR-4265 1 1 0
chr2:219506025|219506323 hsa-miR-3909 0 1 0
chr2:219506025|219506323 hsa-miR-4492 0 1 0
chr2:219506025|219506323 hsa-miR-4498 0 1 0
chr2:219506025|219506323 hsa-miR-1587 0 1 0
chr2:219506025|219506323 hsa-miR-4642 0 1 0
chr2:219506025|219506323 hsa-miR-4706 1 1 0
chr2:219506025|219506323 hsa-miR-4734 0 1 0
chr2:219506025|219506323 hsa-miR-5689 0 1 0
chr2:219506025|219506323 hsa-miR-5698 1 1 0
chr2:219506025|219506323 hsa-miR-5787 1 1 0
chr2:219506025|219506323 hsa-miR-6070 0 1 0
chr2:219506025|219506323 hsa-miR-6085 0 1 0
chr2:219506025|219506323 hsa-miR-6090 1 0 0
chr2:219506025|219506323 hsa-miR-7150 0 1 0
chr2:219506025|219506323 hsa-miR-10226 1 0 0
chr2:219506025|219506323 hsa-miR-12125 1 0 0
chr2:219506025|219506323 hsa-miR-4435 1 0 0
chr2:219506025|219506323 hsa-miR-4747-3p 1 0 0
chr2:219506025|219506323 hsa-miR-93-3p 1 0 0
chr2:219506025|219506323 hsa-miR-6747-3p 0 1 0
chr2:219506025|219506323 hsa-miR-6825-5p 0 1 0
chr2:219506025|219506323 hsa-miR-4722-5p 0 1 0
chr2:219506025|219506323 hsa-miR-6762-3p 1 0 0
chr2:219506025|219506323 hsa-miR-1915-5p 1 0 0
chr2:219506025|219506323 hsa-miR-6793-5p 1 1 0
chr2:219506025|219506323 hsa-miR-877-3p 0 1 0
chr2:219506025|219506323 hsa-miR-6882-3p 1 1 0
chr2:219506025|219506323 hsa-miR-1229-5p 1 0 0
chr2:219506025|219506323 hsa-miR-6803-3p 1 0 0
chr2:219506025|219506323 hsa-miR-6771-5p 0 1 0
chr2:219506025|219506323 hsa-miR-3677-3p 1 1 0
chr2:219506025|219506323 hsa-miR-4446-5p 1 0 0
chr2:219506025|219506323 hsa-miR-149-3p 0 1 0
chr2:219506025|219506323 hsa-miR-6824-5p 1 0 0
chr2:219506025|219506323 hsa-miR-339-5p 1 0 0
chr2:219506025|219506323 hsa-miR-7160-3p 0 1 0
chr2:219506025|219506323 hsa-miR-6870-3p 1 0 0
chr2:219506025|219506323 hsa-miR-1237-3p 1 1 0
chr2:219506025|219506323 hsa-miR-4695-3p 1 0 0
chr2:219506025|219506323 hsa-miR-4732-3p 1 0 0
chr2:219506025|219506323 hsa-miR-106b-3p 1 0 0
chr2:219506025|219506323 hsa-miR-3074-5p 0 1 0
chr2:219506025|219506323 hsa-miR-6865-3p 0 1 0
chr2:219506025|219506323 hsa-miR-6826-3p 1 0 0
chr2:219506025|219506323 hsa-miR-6760-3p 0 1 0
chr2:219506025|219506323 hsa-miR-3126-3p 0 1 0
chr2:219506025|219506323 hsa-miR-6734-3p 1 0 0
chr2:219506025|219506323 hsa-miR-1233-5p 1 0 0
chr2:219506025|219506323 hsa-miR-4763-3p 1 0 0
chr2:219506025|219506323 hsa-miR-1343-5p 1 1 0
chr2:219506025|219506323 hsa-miR-6726-5p 1 0 0
chr2:219506025|219506323 hsa-miR-6803-5p 1 0 0
chr2:219506025|219506323 hsa-miR-7111-5p 1 0 0
chr2:219506025|219506323 hsa-miR-3127-3p 1 0 0
chr2:219506025|219506323 hsa-miR-6754-3p 1 0 0
chr2:219506025|219506323 hsa-miR-6866-3p 1 0 0
chr2:219506025|219506323 hsa-miR-3620-5p 1 1 0
chr2:219506025|219506323 hsa-miR-4728-5p 0 1 0
chr2:219506025|219506323 hsa-miR-328-5p 1 0 0
chr2:219506025|219506323 hsa-miR-4749-5p 1 1 0
chr2:219506025|219506323 hsa-miR-675-5p 0 1 0
chr2:219506025|219506323 hsa-miR-6777-5p 0 1 0
chr2:219506025|219506323 hsa-miR-6848-5p 1 0 0
chr2:219506025|219506323 hsa-miR-6883-5p 0 1 0
chr2:219506025|219506323 hsa-miR-6889-5p 0 1 0
chr2:219506025|219506323 hsa-miR-4723-5p 0 1 0
chr2:219506025|219506323 hsa-miR-6731-5p 0 1 0
chr2:219506025|219506323 hsa-miR-4665-5p 1 1 0
chr2:219506025|219506323 hsa-miR-6877-3p 0 1 0
chr2:219506025|219506323 hsa-miR-541-3p 0 1 0
chr2:219506025|219506323 hsa-miR-6724-5p 0 1 0
chr2:219506025|219506323 hsa-miR-2682-3p 1 1 0
chr2:219506025|219506323 hsa-miR-6893-3p 1 1 0
chr2:219506025|219506323 hsa-miR-6792-3p 0 1 0
chr2:219506025|219506323 hsa-miR-6801-3p 1 0 0
chr2:219506025|219506323 hsa-miR-3059-5p 1 0 0
chr2:219506025|219506323 hsa-miR-4701-5p 0 1 0
chr2:219506025|219506323 hsa-miR-10397-5p 1 0 0
chr2:219506025|219506323 hsa-miR-6781-3p 0 1 0
chr2:219506025|219506323 hsa-miR-5006-3p 1 0 0
chr2:219506025|219506323 hsa-miR-6838-5p 0 1 0
chr2:219506025|219506323 hsa-miR-3064-3p 0 1 0
chr2:219506025|219506323 hsa-miR-4790-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:219506025|219506323
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MFLGGCLGPPRSLLGCHMLLCMLVPTCKVAPWRTMLSRSRT
Nucleotide Sequence CTGTTCTTGGGGGGATGCCTGGGCCCTCCCCGCAGCCTCTTGGGGTGTCACATGCTGCTGTGTATGCTGGTACCTACCTGCAAAGTGGCTCCATGGAGGACGATGCTCTCCCGGAGCCGCACA
CircID chr2:219506025|219506323
ORF Type ORF2
Protein Length 83
Nucleotide Length 249
Protein Sequence MQNTRVLLPKRTVKGKGKRQEAAGTGGCEVWPDAEPTAFTLLCSWGDAWALPAASWGVTCCCVCWYLPAKWLHGGRCSPGAAH
Nucleotide Sequence ATGCAGAACACACGTGTGCTCCTGCCAAAGAGGACAGTGAAAGGTAAGGGGAAGAGGCAGGAGGCAGCAGGAACCGGAGGGTGTGAGGTGTGGCCAGATGCAGAGCCCACGGCGTTCACCCTTCTCTGTTCTTGGGGGGATGCCTGGGCCCTCCCCGCAGCCTCTTGGGGTGTCACATGCTGCTGTGTATGCTGGTACCTACCTGCAAAGTGGCTCCATGGAGGACGATGCTCTCCCGGAGCCGCACAC
CircID chr2:219506025|219506323
ORF Type ORF3
Protein Length 51
Nucleotide Length 153
Protein Sequence MQSPRRSPFSVLGGMPGPSPQPLGVSHAAVYAGTYLQSGSMEDDALPEPHT
Nucleotide Sequence ATGCAGAGCCCACGGCGTTCACCCTTCTCTGTTCTTGGGGGGATGCCTGGGCCCTCCCCGCAGCCTCTTGGGGTGTCACATGCTGCTGTGTATGCTGGTACCTACCTGCAAAGTGGCTCCATGGAGGACGATGCTCTCCCGGAGCCGCACACC
CircID chr2:219506025|219506323
ORF Type ORF4
Protein Length 34
Nucleotide Length 105
Protein Sequence MHLATPHTLRFLLPPASSPYLSLSSLAGAHVCSA
Nucleotide Sequence CTGCATCTGGCCACACCTCACACCCTCCGGTTCCTGCTGCCTCCTGCCTCTTCCCCTTACCTTTCACTGTCCTCTTTGGCAGGAGCACACGTGTGTTCTGCATAG
CircID chr2:219506025|219506323
ORF Type ORF5
Protein Length 36
Nucleotide Length 108
Protein Sequence MPLPLTFHCPLWQEHTCVLHSIVGWGSTVGRWARVE
Nucleotide Sequence CTGCCTCTTCCCCTTACCTTTCACTGTCCTCTTTGGCAGGAGCACACGTGTGTTCTGCATAGCATCGTGGGCTGGGGGAGCACCGTGGGACGCTGGGCCCGCGTGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab