CircRNA Information

General Information
circRNA Basic Information
CircID chr2:222919064|222919202
Strand +
CircType exon
Host Gene ENSG00000123983.12;
Algorism CIRI2;
Sequence CCATGCTGGCCTTGGCTCCCAGGGCCTCCACTGCAGCCATGGTATGCACAATGATGCCCTTGGGGAACTCGGACCAGGTCGGTGGCTTTCCATCAACAGTGATGATGTGCCGCAGGCGTGGGACCAAAGAAACTATATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:222919064|222919202 hsa-miR-133b 0 0 1
chr2:222919064|222919202 hsa-miR-604 0 0 1
chr2:222919064|222919202 hsa-miR-631 0 1 1
chr2:222919064|222919202 hsa-miR-647 0 1 1
chr2:222919064|222919202 hsa-miR-650 0 0 1
chr2:222919064|222919202 hsa-miR-662 0 1 1
chr2:222919064|222919202 hsa-miR-920 0 0 1
chr2:222919064|222919202 hsa-miR-1208 0 0 1
chr2:222919064|222919202 hsa-miR-1291 0 1 1
chr2:222919064|222919202 hsa-miR-1267 0 0 1
chr2:222919064|222919202 hsa-miR-338-3p 0 0 1
chr2:222919064|222919202 hsa-miR-9 0 0 1
chr2:222919064|222919202 hsa-miR-133a 0 0 1
chr2:222919064|222919202 hsa-miR-4289 0 1 0
chr2:222919064|222919202 hsa-miR-3978 0 1 0
chr2:222919064|222919202 hsa-miR-4688 1 0 0
chr2:222919064|222919202 hsa-miR-11401 0 1 0
chr2:222919064|222919202 hsa-miR-12115 0 1 0
chr2:222919064|222919202 hsa-miR-17-3p 0 1 0
chr2:222919064|222919202 hsa-miR-505-5p 0 1 0
chr2:222919064|222919202 hsa-miR-2467-5p 0 1 0
chr2:222919064|222919202 hsa-miR-5008-5p 0 1 0
chr2:222919064|222919202 hsa-miR-4786-3p 1 1 0
chr2:222919064|222919202 hsa-miR-3922-5p 0 1 0
chr2:222919064|222919202 hsa-miR-6814-5p 0 1 0
chr2:222919064|222919202 hsa-miR-6746-3p 1 0 0
chr2:222919064|222919202 hsa-miR-891a-3p 0 1 0
chr2:222919064|222919202 hsa-miR-6775-5p 1 0 0
chr2:222919064|222919202 hsa-miR-6726-5p 0 1 0
chr2:222919064|222919202 hsa-miR-6819-5p 1 0 0
chr2:222919064|222919202 hsa-miR-6791-5p 0 1 0
chr2:222919064|222919202 hsa-miR-6837-5p 0 1 0
chr2:222919064|222919202 hsa-miR-4691-5p 1 0 0
chr2:222919064|222919202 hsa-miR-10395-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr2:222919064|222919202
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MHNDALGELGPGRWLSINSDDVPQAWDQRNYI
Nucleotide Sequence ATGCACAATGATGCCCTTGGGGAACTCGGACCAGGTCGGTGGCTTTCCATCAACAGTGATGATGTGCCGCAGGCGTGGGACCAAAGAAACTATATC

CircID chr2:222919064|222919202
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MLALAPRASTAAMVCTMMPLGNSDQVGGFPSTVMMCRRRGTKETI
Nucleotide Sequence ATGCTGGCCTTGGCTCCCAGGGCCTCCACTGCAGCCATGGTATGCACAATGATGCCCTTGGGGAACTCGGACCAGGTCGGTGGCTTTCCATCAACAGTGATGATGTGCCGCAGGCGTGGGACCAAAGAAACTATA

CircID chr2:222919064|222919202
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MVPRLRHIITVDGKPPTWSEFPKGIIVHTMAAVEALGAKASM
Nucleotide Sequence TTGGTCCCACGCCTGCGGCACATCATCACTGTTGATGGAAAGCCACCGACCTGGTCCGAGTTCCCCAAGGGCATCATTGTGCATACCATGGCTGCAGTGGAGGCCCTGGGAGCCAAGGCCAGCATG

CircID chr2:222919064|222919202
ORF Type ORF4
Protein Length 33
Nucleotide Length 99
Protein Sequence MLMESHRPGPSSPRASLCIPWLQWRPWEPRPAW
Nucleotide Sequence CTGTTGATGGAAAGCCACCGACCTGGTCCGAGTTCCCCAAGGGCATCATTGTGCATACCATGGCTGCAGTGGAGGCCCTGGGAGCCAAGGCCAGCATGG

CircID chr2:222919064|222919202
ORF Type ORF5
Protein Length 25
Nucleotide Length 75
Protein Sequence MVRVPQGHHCAYHGCSGGPGSQGQH
Nucleotide Sequence CTGGTCCGAGTTCCCCAAGGGCATCATTGTGCATACCATGGCTGCAGTGGAGGCCCTGGGAGCCAAGGCCAGCAT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites