CircNet

General Information

circRNA Basic Information

CircID	chr2:229829193\|229836984
Strand	-
CircType	exon
Host Gene	ENSG00000153827.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	TCGGCGAGGCTCTGGCCTGGGCAAAAGAGGAGCAGCTGAAGCTCGTCGACAGGAGAAAATGGCAGACCCTGAAAGCAACCAGGAGGCAGTAAATTCTTCAGCTGCTCGGACAGATGAAGCTCCCCAAGGAGCTGCAGCCTCTAGTTCTGTTGCAGGGGCTGTTGGCATGACCACCTCTGGGGAGAGTGAATCAGATGATTCCGAGATGGGACGTTTGCAAGCTTTGTTAGAGGCAAGGGGTCTTCCCCCTCACCTATTTGGTCCTCTTGGTCCTCGGATGTCACAGCTTTTCCATAGAACAATTGGAAGTGGAGCTA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr2:229829193\|229836984	hsa-miR-127-5p	0	1	1
chr2:229829193\|229836984	hsa-miR-105-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr2:229829193\|229836984
ORF Type	ORF1
Protein Length	86
Nucleotide Length	258
Protein Sequence	MADPESNQEAVNSSAARTDEAPQGAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGA
Nucleotide Sequence	ATGGCAGACCCTGAAAGCAACCAGGAGGCAGTAAATTCTTCAGCTGCTCGGACAGATGAAGCTCCCCAAGGAGCTGCAGCCTCTAGTTCTGTTGCAGGGGCTGTTGGCATGACCACCTCTGGGGAGAGTGAATCAGATGATTCCGAGATGGGACGTTTGCAAGCTTTGTTAGAGGCAAGGGGTCTTCCCCCTCACCTATTTGGTCCTCTTGGTCCTCGGATGTCACAGCTTTTCCATAGAACAATTGGAAGTGGAGCT

CircID	chr2:229829193\|229836984
ORF Type	ORF2
Protein Length	56
Nucleotide Length	168
Protein Sequence	MPTAPATELEAAAPWGASSVRAAEEFTASWLLSGSAIFSCRRASAAPLLPRPEPRR
Nucleotide Sequence	ATGCCAACAGCCCCTGCAACAGAACTAGAGGCTGCAGCTCCTTGGGGAGCTTCATCTGTCCGAGCAGCTGAAGAATTTACTGCCTCCTGGTTGCTTTCAGGGTCTGCCATTTTCTCCTGTCGACGAGCTTCAGCTGCTCCTCTTTTGCCCAGGCCAGAGCCTCGCCGA

CircID	chr2:229829193\|229836984
ORF Type	ORF3
Protein Length	54
Nucleotide Length	162
Protein Sequence	LFYGKAVTSEDQEDQIGEGEDPLPLTKLANVPSRNHLIHSPQRWSCQQPLQQN*
Nucleotide Sequence	TTGTTCTATGGAAAAGCTGTGACATCCGAGGACCAAGAGGACCAAATAGGTGAGGGGGAAGACCCCTTGCCTCTAACAAAGCTTGCAAACGTCCCATCTCGGAATCATCTGATTCACTCTCCCCAGAGGTGGTCATGCCAACAGCCCCTGCAACAGAACTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr2:229829193\|229836984	RBM5	1	0	0
chr2:229829193\|229836984	NOP56	1	1	0
chr2:229829193\|229836984	MOV10	0	0	1
chr2:229829193\|229836984	ELAVL1	6	4	0
chr2:229829193\|229836984	SF3B4	2	0	2
chr2:229829193\|229836984	FAM120A	0	0	1
chr2:229829193\|229836984	FKBP4	0	1	0
chr2:229829193\|229836984	PRPF8	2	3	2
chr2:229829193\|229836984	UPF1	0	1	0
chr2:229829193\|229836984	TAF15	0	1	0
chr2:229829193\|229836984	FMR1	4	2	13
chr2:229829193\|229836984	FUS	1	1	0
chr2:229829193\|229836984	DGCR8	1	0	0
chr2:229829193\|229836984	SRSF1	3	0	6
chr2:229829193\|229836984	NOP58	2	0	1
chr2:229829193\|229836984	U2AF1	0	0	9
chr2:229829193\|229836984	U2AF2	8	9	11
chr2:229829193\|229836984	SRSF9	0	0	3
chr2:229829193\|229836984	DDX54	0	0	4
chr2:229829193\|229836984	RBM10	1	0	0
chr2:229829193\|229836984	HNRNPL	0	2	0
chr2:229829193\|229836984	HNRNPM	0	0	1
chr2:229829193\|229836984	HNRNPC	1	10	0
chr2:229829193\|229836984	TRA2A	0	0	1
chr2:229829193\|229836984	HNRNPA1	0	4	0
chr2:229829193\|229836984	ACIN1	0	0	3
chr2:229829193\|229836984	LIN28B	0	0	1
chr2:229829193\|229836984	FXR1	0	0	5
chr2:229829193\|229836984	BCCIP	1	0	1
chr2:229829193\|229836984	SND1	0	0	1
chr2:229829193\|229836984	IGF2BP3	1	1	3
chr2:229829193\|229836984	IGF2BP2	0	1	6
chr2:229829193\|229836984	TARDBP	1	0	0
chr2:229829193\|229836984	FBL	1	0	1
chr2:229829193\|229836984	BUD13	1	1	4
chr2:229829193\|229836984	RBM47	0	2	0
chr2:229829193\|229836984	SLTM	0	0	4
chr2:229829193\|229836984	DDX42	0	0	1
chr2:229829193\|229836984	FXR2	2	1	8
chr2:229829193\|229836984	AIFM1	1	0	2
chr2:229829193\|229836984	EIF4A3	2	2	6
chr2:229829193\|229836984	AGO2	1	0	1

CircRNA Information