CircRNA Information

General Information
circRNA Basic Information
CircID chr2:230818788|230818999
Strand +
CircType exon
Host Gene ENSG00000135932.9;
Algorism CIRI2;
Sequence ACTCTCATCCATACATTTGCCTTCATGAACCCAGCCATGTTCAGAACTCCCGTAGCACAGTCTTTGAATTCTGAAATGACACAAAGATCAAGAGAAAGCCCACATGTGCCCTAGTGTGCAAGCAGCAGCAGCTACGATCTCCAACCTGGACTGAAAAACAAAAGGGTAAAATGAAAAACCGTTCACTTAACAGCAGATTAGCAGTAATGTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:230818788|230818999 hsa-miR-22-5p 0 0 1
chr2:230818788|230818999 hsa-miR-22-3p 0 0 1
chr2:230818788|230818999 hsa-miR-433-5p 0 0 1
chr2:230818788|230818999 hsa-miR-433-3p 0 0 1
chr2:230818788|230818999 hsa-miR-579-5p 0 0 1
chr2:230818788|230818999 hsa-miR-579-3p 0 0 1
chr2:230818788|230818999 hsa-miR-592 0 0 1
chr2:230818788|230818999 hsa-miR-597-5p 0 0 1
chr2:230818788|230818999 hsa-miR-597-3p 0 0 1
chr2:230818788|230818999 hsa-miR-599 0 0 1
chr2:230818788|230818999 hsa-miR-616-5p 0 0 1
chr2:230818788|230818999 hsa-miR-616-3p 0 0 1
chr2:230818788|230818999 hsa-miR-620 0 0 1
chr2:230818788|230818999 hsa-miR-887-5p 0 0 1
chr2:230818788|230818999 hsa-miR-887-3p 0 0 1
chr2:230818788|230818999 hsa-miR-1206 0 0 1
chr2:230818788|230818999 hsa-miR-1246 0 0 1
chr2:230818788|230818999 hsa-miR-1255a 0 0 1
chr2:230818788|230818999 hsa-miR-1270 0 1 1
chr2:230818788|230818999 hsa-miR-299-3p 0 0 1
chr2:230818788|230818999 hsa-miR-455-3p 0 0 1
chr2:230818788|230818999 hsa-miR-1255b 0 0 1
chr2:230818788|230818999 hsa-miR-323-3p 0 0 1
chr2:230818788|230818999 hsa-miR-422a 1 0 0
chr2:230818788|230818999 hsa-miR-638 1 0 0
chr2:230818788|230818999 hsa-miR-762 1 0 0
chr2:230818788|230818999 hsa-miR-4327 1 1 0
chr2:230818788|230818999 hsa-miR-4265 0 1 0
chr2:230818788|230818999 hsa-miR-3652 1 0 0
chr2:230818788|230818999 hsa-miR-4535 1 0 0
chr2:230818788|230818999 hsa-miR-4683 0 1 0
chr2:230818788|230818999 hsa-miR-4734 1 0 0
chr2:230818788|230818999 hsa-miR-5787 1 0 0
chr2:230818788|230818999 hsa-miR-8060 0 1 0
chr2:230818788|230818999 hsa-miR-92a-1-5p 1 0 0
chr2:230818788|230818999 hsa-miR-6854-5p 1 0 0
chr2:230818788|230818999 hsa-miR-3692-5p 1 0 0
chr2:230818788|230818999 hsa-miR-6746-5p 1 0 0
chr2:230818788|230818999 hsa-miR-8069 1 0 0
chr2:230818788|230818999 hsa-miR-6776-5p 1 0 0
chr2:230818788|230818999 hsa-miR-6871-5p 1 1 0
chr2:230818788|230818999 hsa-miR-3151-5p 1 0 0
chr2:230818788|230818999 hsa-miR-6793-5p 1 0 0
chr2:230818788|230818999 hsa-miR-23a-5p 1 0 0
chr2:230818788|230818999 hsa-miR-1226-5p 1 0 0
chr2:230818788|230818999 hsa-miR-6753-5p 1 0 0
chr2:230818788|230818999 hsa-miR-296-3p 1 0 0
chr2:230818788|230818999 hsa-miR-493-5p 1 0 0
chr2:230818788|230818999 hsa-miR-1296-5p 1 0 0
chr2:230818788|230818999 hsa-miR-4704-5p 1 1 0
chr2:230818788|230818999 hsa-miR-6839-3p 0 1 0
chr2:230818788|230818999 hsa-miR-1273h-5p 1 0 0
chr2:230818788|230818999 hsa-miR-6879-5p 1 0 0
chr2:230818788|230818999 hsa-miR-4632-5p 1 0 0
chr2:230818788|230818999 hsa-miR-6735-5p 1 0 0
chr2:230818788|230818999 hsa-miR-6511a-5p 1 1 0
chr2:230818788|230818999 hsa-miR-4665-5p 1 0 0
chr2:230818788|230818999 hsa-miR-378a-3p 1 0 0
chr2:230818788|230818999 hsa-miR-6750-5p 1 0 0
chr2:230818788|230818999 hsa-miR-6791-5p 1 0 0
chr2:230818788|230818999 hsa-miR-10527-5p 1 0 0
chr2:230818788|230818999 hsa-miR-7157-3p 0 1 0
chr2:230818788|230818999 hsa-miR-7161-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr2:230818788|230818999
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MNPAMFRTPVAQSLNSEMTQRSRESPHVP
Nucleotide Sequence ATGAACCCAGCCATGTTCAGAACTCCCGTAGCACAGTCTTTGAATTCTGAAATGACACAAAGATCAAGAGAAAGCCCACATGTGCCCTAG

CircID chr2:230818788|230818999
ORF Type ORF2
Protein Length 51
Nucleotide Length 156
Protein Sequence MLLSERFFILPFCFSVQVGDRSCCCLHTRAHVGFLLIFVSFQNSKTVLREF
Nucleotide Sequence CTGCTGTTAAGTGAACGGTTTTTCATTTTACCCTTTTGTTTTTCAGTCCAGGTTGGAGATCGTAGCTGCTGCTGCTTGCACACTAGGGCACATGTGGGCTTTCTCTTGATCTTTGTGTCATTTCAGAATTCAAAGACTGTGCTACGGGAGTTCTGA

CircID chr2:230818788|230818999
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MCHFRIQRLCYGSSEHGWVHEGKCMDES
Nucleotide Sequence TTGTGTCATTTCAGAATTCAAAGACTGTGCTACGGGAGTTCTGAACATGGCTGGGTTCATGAAGGCAAATGTATGGATGAGAGT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites