CircRNA Information

General Information
circRNA Basic Information
CircID chr2:230878218|230878300
Strand -
CircType exon
Host Gene ENSG00000135916.14;
Algorism CIRI2;
Sequence ATGTCTCTCCATTCCTCTCCAACCCTGCCCACCTCCCTGTACCAGAGCTGTGATCTCTCGGTGGGGGGCCCATCTCTGCTGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:230878218|230878300 hsa-miR-214-5p 0 0 1
chr2:230878218|230878300 hsa-miR-214-3p 0 0 1
chr2:230878218|230878300 hsa-miR-185-5p 0 0 1
chr2:230878218|230878300 hsa-miR-185-3p 0 0 1
chr2:230878218|230878300 hsa-miR-620 0 0 1
chr2:230878218|230878300 hsa-miR-541-5p 0 0 1
chr2:230878218|230878300 hsa-miR-541-3p 0 0 1
chr2:230878218|230878300 hsa-miR-922 0 1 1
chr2:230878218|230878300 hsa-miR-1270 0 0 1
chr2:230878218|230878300 hsa-miR-1321 0 1 1
chr2:230878218|230878300 hsa-miR-296-5p 0 1 1
chr2:230878218|230878300 hsa-miR-296-3p 1 1 1
chr2:230878218|230878300 hsa-miR-654-5p 0 0 1
chr2:230878218|230878300 hsa-miR-1207-5p 1 1 1
chr2:230878218|230878300 hsa-miR-1280 0 0 1
chr2:230878218|230878300 hsa-miR-608 1 0 0
chr2:230878218|230878300 hsa-miR-612 1 0 0
chr2:230878218|230878300 hsa-miR-663a 1 0 0
chr2:230878218|230878300 hsa-miR-762 1 0 0
chr2:230878218|230878300 hsa-miR-760 1 0 0
chr2:230878218|230878300 hsa-miR-1293 1 0 0
chr2:230878218|230878300 hsa-miR-1268a 1 0 0
chr2:230878218|230878300 hsa-miR-3125 0 1 0
chr2:230878218|230878300 hsa-miR-3132 1 0 0
chr2:230878218|230878300 hsa-miR-3138 1 0 0
chr2:230878218|230878300 hsa-miR-3141 1 0 0
chr2:230878218|230878300 hsa-miR-3147 1 0 0
chr2:230878218|230878300 hsa-miR-4298 1 0 0
chr2:230878218|230878300 hsa-miR-4270 1 1 0
chr2:230878218|230878300 hsa-miR-1268b 1 0 0
chr2:230878218|230878300 hsa-miR-3689c 1 0 0
chr2:230878218|230878300 hsa-miR-4481 1 0 0
chr2:230878218|230878300 hsa-miR-4488 1 0 0
chr2:230878218|230878300 hsa-miR-4505 1 0 0
chr2:230878218|230878300 hsa-miR-4507 1 0 0
chr2:230878218|230878300 hsa-miR-4523 0 1 0
chr2:230878218|230878300 hsa-miR-1587 1 0 0
chr2:230878218|230878300 hsa-miR-4651 1 1 0
chr2:230878218|230878300 hsa-miR-4660 1 0 0
chr2:230878218|230878300 hsa-miR-4739 1 1 0
chr2:230878218|230878300 hsa-miR-4748 1 0 0
chr2:230878218|230878300 hsa-miR-5194 1 0 0
chr2:230878218|230878300 hsa-miR-5739 0 1 0
chr2:230878218|230878300 hsa-miR-5787 1 0 0
chr2:230878218|230878300 hsa-miR-6086 1 0 0
chr2:230878218|230878300 hsa-miR-6132 1 0 0
chr2:230878218|230878300 hsa-miR-6133 1 0 0
chr2:230878218|230878300 hsa-miR-6134 1 0 0
chr2:230878218|230878300 hsa-miR-6860 1 0 0
chr2:230878218|230878300 hsa-miR-7150 1 0 0
chr2:230878218|230878300 hsa-miR-12114 1 0 0
chr2:230878218|230878300 hsa-miR-150-3p 1 1 0
chr2:230878218|230878300 hsa-miR-6861-5p 1 0 0
chr2:230878218|230878300 hsa-miR-7106-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6825-5p 1 1 0
chr2:230878218|230878300 hsa-miR-6799-5p 1 1 0
chr2:230878218|230878300 hsa-miR-3192-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6757-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6880-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6746-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6721-5p 1 0 0
chr2:230878218|230878300 hsa-miR-197-5p 1 0 0
chr2:230878218|230878300 hsa-miR-659-3p 1 0 0
chr2:230878218|230878300 hsa-miR-6748-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6732-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6798-5p 1 1 0
chr2:230878218|230878300 hsa-miR-6782-5p 1 0 0
chr2:230878218|230878300 hsa-miR-30b-3p 1 0 0
chr2:230878218|230878300 hsa-miR-5088-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6740-5p 1 0 0
chr2:230878218|230878300 hsa-miR-1229-5p 1 1 0
chr2:230878218|230878300 hsa-miR-3127-5p 1 0 0
chr2:230878218|230878300 hsa-miR-1908-5p 1 0 0
chr2:230878218|230878300 hsa-miR-1228-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6771-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6823-5p 1 1 0
chr2:230878218|230878300 hsa-miR-4756-3p 0 1 0
chr2:230878218|230878300 hsa-miR-4787-5p 1 0 0
chr2:230878218|230878300 hsa-miR-149-3p 1 0 0
chr2:230878218|230878300 hsa-miR-6824-5p 1 0 0
chr2:230878218|230878300 hsa-miR-3162-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6802-5p 1 0 0
chr2:230878218|230878300 hsa-miR-7112-5p 1 0 0
chr2:230878218|230878300 hsa-miR-1225-5p 1 0 0
chr2:230878218|230878300 hsa-miR-3689b-3p 1 0 0
chr2:230878218|230878300 hsa-miR-4763-3p 1 0 0
chr2:230878218|230878300 hsa-miR-6769b-5p 1 1 0
chr2:230878218|230878300 hsa-miR-6787-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6816-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6865-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6893-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6726-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6737-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6752-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6754-5p 1 1 0
chr2:230878218|230878300 hsa-miR-6756-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6769a-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6803-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6815-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6819-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6851-5p 1 1 0
chr2:230878218|230878300 hsa-miR-7110-5p 1 0 0
chr2:230878218|230878300 hsa-miR-1249-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6722-3p 1 0 0
chr2:230878218|230878300 hsa-miR-6751-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6779-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6780a-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6808-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6879-5p 1 0 0
chr2:230878218|230878300 hsa-miR-7111-5p 1 0 0
chr2:230878218|230878300 hsa-miR-3620-5p 1 0 0
chr2:230878218|230878300 hsa-miR-4728-5p 1 0 0
chr2:230878218|230878300 hsa-miR-5196-5p 1 0 0
chr2:230878218|230878300 hsa-miR-10396a-5p 1 0 0
chr2:230878218|230878300 hsa-miR-10396b-5p 1 0 0
chr2:230878218|230878300 hsa-miR-1237-5p 1 0 0
chr2:230878218|230878300 hsa-miR-328-5p 1 0 0
chr2:230878218|230878300 hsa-miR-3689a-3p 1 0 0
chr2:230878218|230878300 hsa-miR-4649-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6729-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6777-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6846-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6848-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6883-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6889-5p 1 0 0
chr2:230878218|230878300 hsa-miR-3187-5p 1 0 0
chr2:230878218|230878300 hsa-miR-4436b-3p 1 0 0
chr2:230878218|230878300 hsa-miR-939-5p 1 0 0
chr2:230878218|230878300 hsa-miR-3940-5p 1 0 0
chr2:230878218|230878300 hsa-miR-1914-3p 1 0 0
chr2:230878218|230878300 hsa-miR-7151-3p 1 0 0
chr2:230878218|230878300 hsa-miR-6785-5p 1 0 0
chr2:230878218|230878300 hsa-miR-4667-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6724-5p 1 0 0
chr2:230878218|230878300 hsa-miR-6529-5p 1 1 0
chr2:230878218|230878300 hsa-miR-10400-3p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr2:230878218|230878300
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MSLHSSPTLPTSLYQSCDLSVGGPSLL
Nucleotide Sequence ATGTCTCTCCATTCCTCTCCAACCCTGCCCACCTCCCTGTACCAGAGCTGTGATCTCTCGGTGGGGGGCCCATCTCTGCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab