CircRNA Information

General Information
circRNA Basic Information
CircID chr2:230878633|230878805
Strand +
CircType exon
Host Gene ENSG00000135916.14;
Algorism CIRI2;
Sequence CCTGCTTGTGCTCCTGGGGGGCAGGACTGGGGGTCCTAGCTCCTTGCTTCTTTGGTTCCACTCAGAGAACAGTTGTGCTTGACGGACTCATCCCCACTCCCCAAACTCCAAGCTCCTGCTGGTGGGCTGAAGGCACTGACAGAGTCCCTGGGACACCCCCAGGTAGCCACCTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:230878633|230878805 hsa-miR-148a-5p 0 0 1
chr2:230878633|230878805 hsa-miR-148a-3p 0 0 1
chr2:230878633|230878805 hsa-miR-214-5p 0 0 1
chr2:230878633|230878805 hsa-miR-214-3p 0 0 1
chr2:230878633|230878805 hsa-miR-223-5p 0 0 1
chr2:230878633|230878805 hsa-miR-223-3p 0 0 1
chr2:230878633|230878805 hsa-miR-152-5p 0 0 1
chr2:230878633|230878805 hsa-miR-152-3p 0 0 1
chr2:230878633|230878805 hsa-miR-148b-5p 0 0 1
chr2:230878633|230878805 hsa-miR-148b-3p 0 0 1
chr2:230878633|230878805 hsa-miR-432-5p 0 0 1
chr2:230878633|230878805 hsa-miR-432-3p 0 0 1
chr2:230878633|230878805 hsa-miR-519e-5p 0 0 1
chr2:230878633|230878805 hsa-miR-519e-3p 0 0 1
chr2:230878633|230878805 hsa-miR-619-5p 0 0 1
chr2:230878633|230878805 hsa-miR-619-3p 0 0 1
chr2:230878633|230878805 hsa-miR-634 0 0 1
chr2:230878633|230878805 hsa-miR-637 1 1 1
chr2:230878633|230878805 hsa-miR-708-5p 0 0 1
chr2:230878633|230878805 hsa-miR-708-3p 0 0 1
chr2:230878633|230878805 hsa-miR-665 0 0 1
chr2:230878633|230878805 hsa-miR-939-5p 0 0 1
chr2:230878633|230878805 hsa-miR-939-3p 0 0 1
chr2:230878633|230878805 hsa-miR-1226-5p 0 0 1
chr2:230878633|230878805 hsa-miR-1226-3p 0 0 1
chr2:230878633|230878805 hsa-miR-1255a 0 0 1
chr2:230878633|230878805 hsa-miR-491-5p 0 0 1
chr2:230878633|230878805 hsa-miR-361-3p 0 1 1
chr2:230878633|230878805 hsa-miR-28-5p 0 0 1
chr2:230878633|230878805 hsa-miR-324-3p 0 0 1
chr2:230878633|230878805 hsa-miR-515-3p 0 1 1
chr2:230878633|230878805 hsa-miR-1255b 0 0 1
chr2:230878633|230878805 hsa-miR-1182 1 0 0
chr2:230878633|230878805 hsa-miR-4273 0 1 0
chr2:230878633|230878805 hsa-miR-3921 0 1 0
chr2:230878633|230878805 hsa-miR-1268b 1 0 0
chr2:230878633|230878805 hsa-miR-3135b 1 0 0
chr2:230878633|230878805 hsa-miR-4522 0 1 0
chr2:230878633|230878805 hsa-miR-4530 0 1 0
chr2:230878633|230878805 hsa-miR-4651 1 0 0
chr2:230878633|230878805 hsa-miR-5685 0 1 0
chr2:230878633|230878805 hsa-miR-6085 1 0 0
chr2:230878633|230878805 hsa-miR-6165 1 1 0
chr2:230878633|230878805 hsa-miR-12115 0 1 0
chr2:230878633|230878805 hsa-miR-4433b-3p 1 0 0
chr2:230878633|230878805 hsa-miR-6840-3p 0 1 0
chr2:230878633|230878805 hsa-miR-6747-5p 1 0 0
chr2:230878633|230878805 hsa-miR-4433a-3p 1 0 0
chr2:230878633|230878805 hsa-miR-7106-5p 1 0 0
chr2:230878633|230878805 hsa-miR-6825-5p 1 0 0
chr2:230878633|230878805 hsa-miR-6857-5p 1 1 0
chr2:230878633|230878805 hsa-miR-6510-5p 1 0 0
chr2:230878633|230878805 hsa-miR-5187-5p 0 1 0
chr2:230878633|230878805 hsa-miR-6742-5p 1 0 0
chr2:230878633|230878805 hsa-miR-4697-3p 0 1 0
chr2:230878633|230878805 hsa-miR-6798-5p 1 0 0
chr2:230878633|230878805 hsa-miR-6810-5p 1 0 0
chr2:230878633|230878805 hsa-miR-6852-5p 0 1 0
chr2:230878633|230878805 hsa-miR-6740-5p 0 1 0
chr2:230878633|230878805 hsa-miR-6784-5p 1 0 0
chr2:230878633|230878805 hsa-miR-339-5p 1 1 0
chr2:230878633|230878805 hsa-miR-1910-5p 0 1 0
chr2:230878633|230878805 hsa-miR-7113-5p 0 1 0
chr2:230878633|230878805 hsa-miR-6859-3p 0 1 0
chr2:230878633|230878805 hsa-miR-1296-3p 0 1 0
chr2:230878633|230878805 hsa-miR-3664-3p 0 1 0
chr2:230878633|230878805 hsa-miR-6838-3p 0 1 0
chr2:230878633|230878805 hsa-miR-6769b-5p 1 0 0
chr2:230878633|230878805 hsa-miR-1343-5p 1 0 0
chr2:230878633|230878805 hsa-miR-6726-5p 1 1 0
chr2:230878633|230878805 hsa-miR-6752-5p 1 1 0
chr2:230878633|230878805 hsa-miR-6756-5p 1 0 0
chr2:230878633|230878805 hsa-miR-6803-5p 1 1 0
chr2:230878633|230878805 hsa-miR-6813-5p 1 1 0
chr2:230878633|230878805 hsa-miR-6815-5p 1 1 0
chr2:230878633|230878805 hsa-miR-6842-5p 1 1 0
chr2:230878633|230878805 hsa-miR-7110-5p 0 1 0
chr2:230878633|230878805 hsa-miR-6722-3p 1 0 0
chr2:230878633|230878805 hsa-miR-6751-5p 1 1 0
chr2:230878633|230878805 hsa-miR-6763-5p 1 1 0
chr2:230878633|230878805 hsa-miR-6808-5p 0 1 0
chr2:230878633|230878805 hsa-miR-4728-5p 1 0 0
chr2:230878633|230878805 hsa-miR-6836-5p 1 0 0
chr2:230878633|230878805 hsa-miR-1237-5p 1 0 0
chr2:230878633|230878805 hsa-miR-1909-3p 1 0 0
chr2:230878633|230878805 hsa-miR-4745-5p 1 0 0
chr2:230878633|230878805 hsa-miR-6777-5p 1 0 0
chr2:230878633|230878805 hsa-miR-6848-5p 1 0 0
chr2:230878633|230878805 hsa-miR-6889-5p 1 0 0
chr2:230878633|230878805 hsa-miR-1238-5p 0 1 0
chr2:230878633|230878805 hsa-miR-4758-5p 1 1 0
chr2:230878633|230878805 hsa-miR-3198 1 0 0
chr2:230878633|230878805 hsa-miR-6855-5p 1 1 0
chr2:230878633|230878805 hsa-miR-33b-3p 0 1 0
chr2:230878633|230878805 hsa-miR-6500-5p 0 1 0
chr2:230878633|230878805 hsa-miR-3619-5p 0 1 0
chr2:230878633|230878805 hsa-miR-6764-5p 0 1 0
chr2:230878633|230878805 hsa-miR-4690-3p 0 1 0
chr2:230878633|230878805 hsa-miR-6715b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:230878633|230878805
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MVPLREQLCLTDSSPLPKLQAPAGGLKALTESLGHPQVAT
Nucleotide Sequence TTGGTTCCACTCAGAGAACAGTTGTGCTTGACGGACTCATCCCCACTCCCCAAACTCCAAGCTCCTGCTGGTGGGCTGAAGGCACTGACAGAGTCCCTGGGACACCCCCAGGTAGCCACC
CircID chr2:230878633|230878805
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence LLVLLGGRTGGPSSLLLWFHSENSCA
Nucleotide Sequence CTGCTTGTGCTCCTGGGGGGCAGGACTGGGGGTCCTAGCTCCTTGCTTCTTTGGTTCCACTCAGAGAACAGTTGTGCTTGA
CircID chr2:230878633|230878805
ORF Type ORF3
Protein Length 56
Nucleotide Length 168
Protein Sequence MCSWGAGLGVLAPCFFGSTQRTVVLDGLIPTPQTPSSCWWAEGTDRVPGTPPGSHL
Nucleotide Sequence TTGTGCTCCTGGGGGGCAGGACTGGGGGTCCTAGCTCCTTGCTTCTTTGGTTCCACTCAGAGAACAGTTGTGCTTGACGGACTCATCCCCACTCCCCAAACTCCAAGCTCCTGCTGGTGGGCTGAAGGCACTGACAGAGTCCCTGGGACACCCCCAGGTAGCCACCTT
CircID chr2:230878633|230878805
ORF Type ORF4
Protein Length 26
Nucleotide Length 81
Protein Sequence MSVPSAHQQELGVWGVGMSPSSTTVL
Nucleotide Sequence CTGTCAGTGCCTTCAGCCCACCAGCAGGAGCTTGGAGTTTGGGGAGTGGGGATGAGTCCGTCAAGCACAACTGTTCTCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab