CircRNA Information

General Information
circRNA Basic Information
CircID chr2:231455458|231455596
Strand -
CircType exon
Host Gene ENSG00000115053.14;
Algorism CIRI2;
Sequence CTCGTCCTCCAAAGCCGCCTCTGCCTCCACCACGACCCCCGAAGCCACCTTCACCCTTAGGTTTGGCCCAGTCCAAGGTAACTTTATTTCCATCAATTTCACCGTCTTCCATGGCCTCCTTGGCAGCTTTGGCATCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:231455458|231455596 hsa-miR-22-5p 0 0 1
chr2:231455458|231455596 hsa-miR-22-3p 0 0 1
chr2:231455458|231455596 hsa-miR-320a-5p 0 0 1
chr2:231455458|231455596 hsa-miR-320a-3p 0 0 1
chr2:231455458|231455596 hsa-miR-493-5p 0 0 1
chr2:231455458|231455596 hsa-miR-493-3p 0 0 1
chr2:231455458|231455596 hsa-miR-561-5p 0 0 1
chr2:231455458|231455596 hsa-miR-561-3p 0 0 1
chr2:231455458|231455596 hsa-miR-650 1 0 1
chr2:231455458|231455596 hsa-miR-765 0 0 1
chr2:231455458|231455596 hsa-miR-1288-5p 0 0 1
chr2:231455458|231455596 hsa-miR-1288-3p 0 0 1
chr2:231455458|231455596 hsa-miR-1827 0 0 1
chr2:231455458|231455596 hsa-miR-142-5p 0 0 1
chr2:231455458|231455596 hsa-miR-320b 0 0 1
chr2:231455458|231455596 hsa-miR-320c 0 0 1
chr2:231455458|231455596 hsa-miR-320d 0 0 1
chr2:231455458|231455596 hsa-miR-7 0 0 1
chr2:231455458|231455596 hsa-miR-1269 0 0 1
chr2:231455458|231455596 hsa-miR-768-5p 0 0 1
chr2:231455458|231455596 hsa-miR-608 1 0 0
chr2:231455458|231455596 hsa-miR-637 1 0 0
chr2:231455458|231455596 hsa-miR-762 1 0 0
chr2:231455458|231455596 hsa-miR-760 1 0 0
chr2:231455458|231455596 hsa-miR-1268a 1 0 0
chr2:231455458|231455596 hsa-miR-1269a 0 1 0
chr2:231455458|231455596 hsa-miR-3132 1 0 0
chr2:231455458|231455596 hsa-miR-3197 1 0 0
chr2:231455458|231455596 hsa-miR-4257 1 0 0
chr2:231455458|231455596 hsa-miR-4270 1 0 0
chr2:231455458|231455596 hsa-miR-4271 1 0 0
chr2:231455458|231455596 hsa-miR-3621 1 0 0
chr2:231455458|231455596 hsa-miR-3665 1 0 0
chr2:231455458|231455596 hsa-miR-3936 1 0 0
chr2:231455458|231455596 hsa-miR-1268b 1 0 0
chr2:231455458|231455596 hsa-miR-4429 0 1 0
chr2:231455458|231455596 hsa-miR-4440 1 0 0
chr2:231455458|231455596 hsa-miR-4443 1 0 0
chr2:231455458|231455596 hsa-miR-4451 1 0 0
chr2:231455458|231455596 hsa-miR-4458 1 0 0
chr2:231455458|231455596 hsa-miR-4466 1 0 0
chr2:231455458|231455596 hsa-miR-4467 1 0 0
chr2:231455458|231455596 hsa-miR-4492 1 0 0
chr2:231455458|231455596 hsa-miR-4516 1 0 0
chr2:231455458|231455596 hsa-miR-1269b 0 1 0
chr2:231455458|231455596 hsa-miR-4533 1 0 0
chr2:231455458|231455596 hsa-miR-4534 1 0 0
chr2:231455458|231455596 hsa-miR-1587 1 0 0
chr2:231455458|231455596 hsa-miR-3960 1 0 0
chr2:231455458|231455596 hsa-miR-4656 1 0 0
chr2:231455458|231455596 hsa-miR-4688 1 0 0
chr2:231455458|231455596 hsa-miR-4710 1 0 0
chr2:231455458|231455596 hsa-miR-4739 1 0 0
chr2:231455458|231455596 hsa-miR-5090 1 0 0
chr2:231455458|231455596 hsa-miR-5093 1 0 0
chr2:231455458|231455596 hsa-miR-5705 1 0 0
chr2:231455458|231455596 hsa-miR-5787 1 0 0
chr2:231455458|231455596 hsa-miR-6125 1 0 0
chr2:231455458|231455596 hsa-miR-6860 1 0 0
chr2:231455458|231455596 hsa-miR-6863 1 0 0
chr2:231455458|231455596 hsa-miR-7150 1 0 0
chr2:231455458|231455596 hsa-miR-7704 1 0 0
chr2:231455458|231455596 hsa-miR-9500 1 0 0
chr2:231455458|231455596 hsa-miR-12114 1 0 0
chr2:231455458|231455596 hsa-miR-7-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6747-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6765-5p 1 0 0
chr2:231455458|231455596 hsa-miR-7106-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6510-5p 1 0 0
chr2:231455458|231455596 hsa-miR-8071 1 0 0
chr2:231455458|231455596 hsa-miR-3622a-5p 1 0 0
chr2:231455458|231455596 hsa-miR-1227-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6089 1 0 0
chr2:231455458|231455596 hsa-miR-6880-5p 1 0 0
chr2:231455458|231455596 hsa-miR-7847-3p 1 0 0
chr2:231455458|231455596 hsa-miR-4695-5p 1 0 0
chr2:231455458|231455596 hsa-miR-7154-3p 1 0 0
chr2:231455458|231455596 hsa-miR-6820-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6727-5p 1 0 0
chr2:231455458|231455596 hsa-miR-3187-3p 1 0 0
chr2:231455458|231455596 hsa-miR-197-5p 1 0 0
chr2:231455458|231455596 hsa-miR-432-5p 1 0 0
chr2:231455458|231455596 hsa-miR-3605-5p 0 1 0
chr2:231455458|231455596 hsa-miR-6772-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6793-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6827-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6760-5p 1 0 0
chr2:231455458|231455596 hsa-miR-2467-3p 1 0 0
chr2:231455458|231455596 hsa-miR-6782-5p 1 0 0
chr2:231455458|231455596 hsa-miR-5006-5p 1 0 0
chr2:231455458|231455596 hsa-miR-615-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6786-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6835-5p 1 0 0
chr2:231455458|231455596 hsa-miR-1226-5p 1 0 0
chr2:231455458|231455596 hsa-miR-193b-5p 1 0 0
chr2:231455458|231455596 hsa-miR-4640-5p 1 0 0
chr2:231455458|231455596 hsa-miR-3691-5p 1 0 0
chr2:231455458|231455596 hsa-miR-885-3p 1 0 0
chr2:231455458|231455596 hsa-let-7d-5p 1 0 0
chr2:231455458|231455596 hsa-let-7b-5p 1 0 0
chr2:231455458|231455596 hsa-miR-3677-3p 1 0 0
chr2:231455458|231455596 hsa-miR-6847-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6501-5p 1 0 0
chr2:231455458|231455596 hsa-miR-4787-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6789-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6877-5p 1 0 0
chr2:231455458|231455596 hsa-miR-5010-5p 1 0 0
chr2:231455458|231455596 hsa-let-7c-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6801-5p 1 0 0
chr2:231455458|231455596 hsa-miR-598-5p 1 0 0
chr2:231455458|231455596 hsa-miR-10400-5p 1 0 0
chr2:231455458|231455596 hsa-miR-1207-5p 1 0 0
chr2:231455458|231455596 hsa-miR-4763-3p 1 0 0
chr2:231455458|231455596 hsa-miR-6769b-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6787-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6812-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6865-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6870-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6893-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6737-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6743-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6752-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6754-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6756-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6803-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6815-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6819-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6851-5p 1 0 0
chr2:231455458|231455596 hsa-miR-7110-5p 1 0 0
chr2:231455458|231455596 hsa-miR-11181-3p 1 0 0
chr2:231455458|231455596 hsa-miR-1249-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6722-3p 1 0 0
chr2:231455458|231455596 hsa-miR-6751-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6788-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6808-5p 1 0 0
chr2:231455458|231455596 hsa-miR-7111-5p 1 0 0
chr2:231455458|231455596 hsa-miR-3620-5p 1 0 0
chr2:231455458|231455596 hsa-miR-328-5p 1 0 0
chr2:231455458|231455596 hsa-miR-449c-5p 1 0 0
chr2:231455458|231455596 hsa-miR-4649-5p 1 0 0
chr2:231455458|231455596 hsa-miR-4726-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6729-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6735-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6846-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6848-5p 1 0 0
chr2:231455458|231455596 hsa-miR-3187-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6831-5p 1 0 0
chr2:231455458|231455596 hsa-miR-1910-3p 1 0 0
chr2:231455458|231455596 hsa-miR-6511a-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6511b-5p 1 0 0
chr2:231455458|231455596 hsa-miR-3085-5p 1 0 0
chr2:231455458|231455596 hsa-miR-7843-5p 1 0 0
chr2:231455458|231455596 hsa-miR-4665-5p 1 0 0
chr2:231455458|231455596 hsa-miR-3173-3p 0 1 0
chr2:231455458|231455596 hsa-miR-6785-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6790-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6724-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6762-5p 1 0 0
chr2:231455458|231455596 hsa-miR-6817-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:231455458|231455596
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MPPPRPPKPPSPLGLAQSKVTLFPSISPSSMASLAALAS
Nucleotide Sequence CTGCCTCCACCACGACCCCCGAAGCCACCTTCACCCTTAGGTTTGGCCCAGTCCAAGGTAACTTTATTTCCATCAATTTCACCGTCTTCCATGGCCTCCTTGGCAGCTTTGGCATCC
CircID chr2:231455458|231455596
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MEDGEIDGNKVTLDWAKPKGEGGFGGRGGGRGGFGGR
Nucleotide Sequence ATGGAAGACGGTGAAATTGATGGAAATAAAGTTACCTTGGACTGGGCCAAACCTAAGGGTGAAGGTGGCTTCGGGGGTCGTGGTGGAGGCAGAGGCGGCTTTGGAGGACGA
CircID chr2:231455458|231455596
ORF Type ORF3
Protein Length 45
Nucleotide Length 135
Protein Sequence MPKLPRRPWKTVKLMEIKLPWTGPNLRVKVASGVVVEAEAALEDE
Nucleotide Sequence ATGCCAAAGCTGCCAAGGAGGCCATGGAAGACGGTGAAATTGATGGAAATAAAGTTACCTTGGACTGGGCCAAACCTAAGGGTGAAGGTGGCTTCGGGGGTCGTGGTGGAGGCAGAGGCGGCTTTGGAGGACGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab