CircRNA Information

General Information
circRNA Basic Information
CircID chr2:231460231|231460546
Strand +
CircType antisense
Host Gene ENSG00000115053.15;
Algorism CIRI2;DCC;
Sequence CTTCCACTTTCTGTTTCTTGGCTTCAGGAGCTGCTTTCTGTTTGGCCATTTCCTTCTTTCGTTTTCCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:231460231|231460546 hsa-miR-204-5p 0 0 1
chr2:231460231|231460546 hsa-miR-204-3p 0 0 1
chr2:231460231|231460546 hsa-miR-211-5p 0 0 1
chr2:231460231|231460546 hsa-miR-211-3p 0 0 1
chr2:231460231|231460546 hsa-miR-488-5p 0 0 1
chr2:231460231|231460546 hsa-miR-488-3p 0 0 1
chr2:231460231|231460546 hsa-miR-558 0 0 1
chr2:231460231|231460546 hsa-miR-561-5p 0 0 1
chr2:231460231|231460546 hsa-miR-561-3p 0 0 1
chr2:231460231|231460546 hsa-miR-578 0 0 1
chr2:231460231|231460546 hsa-miR-579-5p 0 0 1
chr2:231460231|231460546 hsa-miR-579-3p 0 0 1
chr2:231460231|231460546 hsa-miR-588 0 0 1
chr2:231460231|231460546 hsa-miR-622 0 0 1
chr2:231460231|231460546 hsa-miR-648 0 0 1
chr2:231460231|231460546 hsa-miR-708-5p 0 0 1
chr2:231460231|231460546 hsa-miR-708-3p 0 0 1
chr2:231460231|231460546 hsa-miR-934 0 0 1
chr2:231460231|231460546 hsa-miR-1237-5p 0 0 1
chr2:231460231|231460546 hsa-miR-1237-3p 0 0 1
chr2:231460231|231460546 hsa-miR-1248 0 0 1
chr2:231460231|231460546 hsa-miR-548p 0 0 1
chr2:231460231|231460546 hsa-miR-1284 0 0 1
chr2:231460231|231460546 hsa-miR-330-3p 0 0 1
chr2:231460231|231460546 hsa-miR-361-3p 0 0 1
chr2:231460231|231460546 hsa-miR-28-5p 0 0 1
chr2:231460231|231460546 hsa-miR-513a-3p 0 0 1
chr2:231460231|231460546 hsa-miR-142-3p 0 0 1
chr2:231460231|231460546 hsa-miR-550 0 0 1
chr2:231460231|231460546 hsa-miR-664 0 0 1
chr2:231460231|231460546 hsa-miR-218 0 0 1
chr2:231460231|231460546 hsa-miR-544 0 0 1
chr2:231460231|231460546 hsa-miR-194 0 0 1
chr2:231460231|231460546 hsa-miR-2113 0 1 0
chr2:231460231|231460546 hsa-miR-4672 0 1 0
chr2:231460231|231460546 hsa-miR-135a-3p 1 0 0
chr2:231460231|231460546 hsa-miR-152-5p 0 1 0
chr2:231460231|231460546 hsa-miR-18a-3p 1 0 0
chr2:231460231|231460546 hsa-miR-6836-3p 1 0 0
chr2:231460231|231460546 hsa-miR-212-5p 0 1 0
chr2:231460231|231460546 hsa-miR-7110-3p 1 0 0
chr2:231460231|231460546 hsa-miR-6845-3p 1 0 0
chr2:231460231|231460546 hsa-miR-6868-3p 0 1 0
chr2:231460231|231460546 hsa-miR-5010-3p 1 0 0
chr2:231460231|231460546 hsa-miR-550b-2-5p 0 1 0
chr2:231460231|231460546 hsa-miR-1236-3p 1 0 0
chr2:231460231|231460546 hsa-miR-6867-3p 1 0 0
chr2:231460231|231460546 hsa-miR-3617-3p 0 1 0
chr2:231460231|231460546 hsa-miR-939-5p 1 0 0
chr2:231460231|231460546 hsa-miR-550a-3-5p 0 1 0
chr2:231460231|231460546 hsa-miR-550a-5p 0 1 0
chr2:231460231|231460546 hsa-miR-6792-3p 1 1 0
chr2:231460231|231460546 hsa-miR-6876-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr2:231460231|231460546
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence LENERRKWPNRKQLLKPRNRKWKVTCRIRGYGGDKQHK
Nucleotide Sequence CTGGAAAACGAAAGAAGGAAATGGCCAAACAGAAAGCAGCTCCTGAAGCCAAGAAACAGAAAGTGGAAGGTAACTTGCAGAATTAGGGGATATGGGGGAGATAAACAGCACAAATGA

CircID chr2:231460231|231460546
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MSFFCAGTEPTTAFNLFVGNLNFNKSA
Nucleotide Sequence TTGAGCTTTTTTTGTGCAGGCACAGAACCGACTACGGCTTTCAATCTCTTTGTTGGAAACCTAAACTTTAACAAATCTGCT

CircID chr2:231460231|231460546
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MFISPISPNSASYLPLSVSWLQELLSVWPFPSFVFQ
Nucleotide Sequence CTGTTTATCTCCCCCATATCCCCTAATTCTGCAAGTTACCTTCCACTTTCTGTTTCTTGGCTTCAGGAGCTGCTTTCTGTTTGGCCATTTCCTTCTTTCGTTTTCCAG

CircID chr2:231460231|231460546
ORF Type ORF4
Protein Length 29
Nucleotide Length 90
Protein Sequence MLKFRFPTKRLKAVVGSVPAQKKLNSVYL
Nucleotide Sequence TTGTTAAAGTTTAGGTTTCCAACAAAGAGATTGAAAGCCGTAGTCGGTTCTGTGCCTGCACAAAAAAAGCTCAACTCAGTCTACTTGTAG

CircID chr2:231460231|231460546
ORF Type ORF5
Protein Length 37
Nucleotide Length 111
Protein Sequence MCCLSPPYPLILQVTFHFLFLGFRSCFLFGHFLLSFS
Nucleotide Sequence TTGTGCTGTTTATCTCCCCCATATCCCCTAATTCTGCAAGTTACCTTCCACTTTCTGTTTCTTGGCTTCAGGAGCTGCTTTCTGTTTGGCCATTTCCTTCTTTCGTTTTCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr2:231460231|231460546 KHSRP 3 1 0
chr2:231460231|231460546 MOV10 3 3 0
chr2:231460231|231460546 NCBP3 1 0 0
chr2:231460231|231460546 FKBP4 0 2 0
chr2:231460231|231460546 PRPF8 6 18 4
chr2:231460231|231460546 SRSF10 0 3 0
chr2:231460231|231460546 TNRC6A 3 7 0
chr2:231460231|231460546 CAPRIN1 1 0 0
chr2:231460231|231460546 TROVE2 0 3 0
chr2:231460231|231460546 GNL3 1 5 0
chr2:231460231|231460546 DGCR8 3 17 4
chr2:231460231|231460546 PTBP1 1 7 1
chr2:231460231|231460546 METTL14 0 1 0
chr2:231460231|231460546 DHX9 2 0 0
chr2:231460231|231460546 DDX3X 2 2 1
chr2:231460231|231460546 LARP7 0 4 0
chr2:231460231|231460546 U2AF1 0 14 1
chr2:231460231|231460546 RANGAP1 0 5 0
chr2:231460231|231460546 FXR1 3 8 0
chr2:231460231|231460546 FXR2 2 10 1
chr2:231460231|231460546 GTF2F1 0 11 2
chr2:231460231|231460546 RBM47 1 0 0
chr2:231460231|231460546 SLTM 3 14 1
chr2:231460231|231460546 EIF4G2 0 6 2
chr2:231460231|231460546 DDX42 0 4 0
chr2:231460231|231460546 CSTF2T 1 15 1
chr2:231460231|231460546 VIM 0 8 0
chr2:231460231|231460546 RNF219 0 1 0
chr2:231460231|231460546 XRN2 0 8 0
chr2:231460231|231460546 YWHAG 2 8 2
chr2:231460231|231460546 SLBP 0 1 0
chr2:231460231|231460546 ELAVL1 4 5 1
chr2:231460231|231460546 KHDRBS1 2 3 0
chr2:231460231|231460546 YTHDF1 1 0 0
chr2:231460231|231460546 SRSF7 0 8 1
chr2:231460231|231460546 SRSF1 5 25 3
chr2:231460231|231460546 SRSF3 0 2 0
chr2:231460231|231460546 NONO 1 2 0
chr2:231460231|231460546 U2AF2 14 16 0
chr2:231460231|231460546 SRSF9 0 9 0
chr2:231460231|231460546 DDX54 5 5 5
chr2:231460231|231460546 PCBP2 0 1 0
chr2:231460231|231460546 SF3A3 0 5 0
chr2:231460231|231460546 ZNF184 0 5 1
chr2:231460231|231460546 LIN28B 3 16 1
chr2:231460231|231460546 LIN28A 1 2 0
chr2:231460231|231460546 BCCIP 0 7 0
chr2:231460231|231460546 RBFOX2 0 14 2
chr2:231460231|231460546 SAFB2 2 7 2
chr2:231460231|231460546 RBM27 1 4 1
chr2:231460231|231460546 RBM22 2 3 0
chr2:231460231|231460546 HNRNPK 0 1 0
chr2:231460231|231460546 AIFM1 0 7 1
chr2:231460231|231460546 AGO1 2 4 0
chr2:231460231|231460546 AGO3 1 0 0
chr2:231460231|231460546 AGO2 8 12 1
chr2:231460231|231460546 FAM120A 2 17 1
chr2:231460231|231460546 CNBP 0 4 0
chr2:231460231|231460546 UPF1 3 7 0
chr2:231460231|231460546 TAF15 4 1 0
chr2:231460231|231460546 FUS 1 1 0
chr2:231460231|231460546 HNRNPU 0 1 0
chr2:231460231|231460546 RBM10 4 5 0
chr2:231460231|231460546 HNRNPM 2 0 0
chr2:231460231|231460546 HNRNPC 17 15 0
chr2:231460231|231460546 WTAP 0 1 0
chr2:231460231|231460546 SMNDC1 0 3 1
chr2:231460231|231460546 AUH 0 6 0
chr2:231460231|231460546 HNRNPA1 5 6 0
chr2:231460231|231460546 SND1 2 16 2
chr2:231460231|231460546 IGF2BP1 4 9 1
chr2:231460231|231460546 IGF2BP3 4 17 5
chr2:231460231|231460546 IGF2BP2 6 18 4
chr2:231460231|231460546 HNRNPUL1 0 1 0
chr2:231460231|231460546 TARDBP 2 6 1
chr2:231460231|231460546 YTHDC1 4 5 0
chr2:231460231|231460546 BUD13 2 8 2
chr2:231460231|231460546 RTCB 1 0 1
chr2:231460231|231460546 METTL3 0 4 0
chr2:231460231|231460546 FBL 2 6 2
chr2:231460231|231460546 RBM6 0 2 0
chr2:231460231|231460546 NUMA1 0 8 0
chr2:231460231|231460546 SF3B4 0 4 1
chr2:231460231|231460546 FMR1 4 23 1
chr2:231460231|231460546 CPSF6 0 7 2
chr2:231460231|231460546 NOP58 3 7 2
chr2:231460231|231460546 NOP56 0 4 0
chr2:231460231|231460546 LSM11 0 6 0
chr2:231460231|231460546 HNRNPA2B1 0 25 4
chr2:231460231|231460546 TRA2A 0 9 2
chr2:231460231|231460546 ACIN1 4 9 2
chr2:231460231|231460546 ZC3H7B 1 0 0
chr2:231460231|231460546 SBDS 0 6 0
chr2:231460231|231460546 MSI2 2 3 1
chr2:231460231|231460546 NPM1 2 8 2
chr2:231460231|231460546 TARBP2 1 1 1
chr2:231460231|231460546 EIF4A3 4 8 2
chr2:231460231|231460546 DKC1 0 2 0
chr2:231460231|231460546 EWSR1 1 1 0
chr2:231460231|231460546 ILF3 1 6 0