CircRNA Information

General Information
circRNA Basic Information
CircID chr2:231463211|231463351
Strand -
CircType exon
Host Gene ENSG00000115053.14;
Algorism CIRI2;
Sequence TGCTATCATCTTCTTCATCTTCTGACATTTCCTCATCTTCACTATCTTCTTCTACCTCCTTTGGAGGAGGAGCCATTTTCTTGGGGTCACCTTGATTTTTACCTGCCTAAAATGGACACAAATAGATCATTACACCTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:231463211|231463351 hsa-let-7b-5p 0 0 1
chr2:231463211|231463351 hsa-let-7b-3p 0 0 1
chr2:231463211|231463351 hsa-let-7c-5p 0 0 1
chr2:231463211|231463351 hsa-let-7c-3p 0 0 1
chr2:231463211|231463351 hsa-let-7d-5p 0 0 1
chr2:231463211|231463351 hsa-let-7d-3p 0 0 1
chr2:231463211|231463351 hsa-let-7e-5p 0 0 1
chr2:231463211|231463351 hsa-let-7e-3p 0 0 1
chr2:231463211|231463351 hsa-miR-98-5p 0 0 1
chr2:231463211|231463351 hsa-miR-98-3p 0 0 1
chr2:231463211|231463351 hsa-let-7g-5p 0 0 1
chr2:231463211|231463351 hsa-let-7g-3p 0 0 1
chr2:231463211|231463351 hsa-let-7i-5p 0 0 1
chr2:231463211|231463351 hsa-let-7i-3p 0 0 1
chr2:231463211|231463351 hsa-miR-592 0 0 1
chr2:231463211|231463351 hsa-miR-599 0 0 1
chr2:231463211|231463351 hsa-miR-940 1 0 1
chr2:231463211|231463351 hsa-miR-548c-3p 0 0 1
chr2:231463211|231463351 hsa-let-7a 0 0 1
chr2:231463211|231463351 hsa-let-7f 0 0 1
chr2:231463211|231463351 hsa-miR-612 1 0 0
chr2:231463211|231463351 hsa-miR-765 1 0 0
chr2:231463211|231463351 hsa-miR-3125 1 1 0
chr2:231463211|231463351 hsa-miR-3132 1 0 0
chr2:231463211|231463351 hsa-miR-3185 0 1 0
chr2:231463211|231463351 hsa-miR-4268 0 1 0
chr2:231463211|231463351 hsa-miR-4458 0 1 0
chr2:231463211|231463351 hsa-miR-4647 1 1 0
chr2:231463211|231463351 hsa-miR-4739 1 0 0
chr2:231463211|231463351 hsa-miR-4784 1 0 0
chr2:231463211|231463351 hsa-miR-12118 0 1 0
chr2:231463211|231463351 hsa-miR-12124 0 1 0
chr2:231463211|231463351 hsa-miR-6765-5p 1 0 0
chr2:231463211|231463351 hsa-miR-6894-5p 1 0 0
chr2:231463211|231463351 hsa-miR-6799-5p 1 0 0
chr2:231463211|231463351 hsa-miR-6873-5p 1 0 0
chr2:231463211|231463351 hsa-miR-197-5p 1 1 0
chr2:231463211|231463351 hsa-miR-3605-5p 1 0 0
chr2:231463211|231463351 hsa-miR-1224-5p 1 0 0
chr2:231463211|231463351 hsa-miR-3150b-3p 1 0 0
chr2:231463211|231463351 hsa-miR-6888-5p 1 0 0
chr2:231463211|231463351 hsa-miR-6835-5p 1 0 0
chr2:231463211|231463351 hsa-miR-1226-5p 1 0 0
chr2:231463211|231463351 hsa-let-7f-5p 0 1 0
chr2:231463211|231463351 hsa-let-7a-5p 0 1 0
chr2:231463211|231463351 hsa-miR-519d-5p 0 1 0
chr2:231463211|231463351 hsa-miR-522-3p 0 1 0
chr2:231463211|231463351 hsa-miR-6893-5p 1 1 0
chr2:231463211|231463351 hsa-miR-6752-5p 1 0 0
chr2:231463211|231463351 hsa-miR-6803-5p 1 0 0
chr2:231463211|231463351 hsa-miR-6751-5p 1 0 0
chr2:231463211|231463351 hsa-miR-6774-5p 1 0 0
chr2:231463211|231463351 hsa-miR-6808-5p 1 0 0
chr2:231463211|231463351 hsa-miR-6831-5p 1 1 0
chr2:231463211|231463351 hsa-miR-3679-5p 1 0 0
chr2:231463211|231463351 hsa-miR-6891-5p 1 1 0
chr2:231463211|231463351 hsa-miR-3689d 0 1 0
chr2:231463211|231463351 hsa-miR-6849-5p 1 0 0
chr2:231463211|231463351 hsa-miR-6884-5p 1 0 0
chr2:231463211|231463351 hsa-miR-4509 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:231463211|231463351
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MTFPHLHYLLLPPLEEEPFSWGHLDFYLPKMDTNRSLHLH
Nucleotide Sequence CTGACATTTCCTCATCTTCACTATCTTCTTCTACCTCCTTTGGAGGAGGAGCCATTTTCTTGGGGTCACCTTGATTTTTACCTGCCTAAAATGGACACAAATAGATCATTACACCTCCAC
CircID chr2:231463211|231463351
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MAPPPKEVEEDSEDEEMSEDEEDDS
Nucleotide Sequence ATGGCTCCTCCTCCAAAGGAGGTAGAAGAAGATAGTGAAGATGAGGAAATGTCAGAAGATGAAGAAGATGATAGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab