CircRNA Information

General Information
circRNA Basic Information
CircID chr2:231605790|231606096
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCCCCCAGCCCAACAGGCCAAGCACTGACATCCAAACCAACTGACTACCCAGGAGCCTGGGCATGCTTTGTCCGTCTGGCCCAGGGAGGCATCTGCCCATCCCTGTGAATAGCAGCGTCTCTCCTCAACAGTCAGTGACTGCCTTCTGACAGCCTGACCAGGGGGTCTGAGTGCGAGAGGCATCTGGCATCTCTGAAAAAGCAGCTCCAGCCTGGCTTCCAGGGCAGGGACTCTCCACTGCCAGATCTGCAGACTCTCCACCACCAGGGCGCCTACTGCAGTTGGGAAAAGCCTCAGATCTATGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:231605790|231606096 hsa-miR-27a-5p 0 0 1
chr2:231605790|231606096 hsa-miR-27a-3p 0 0 1
chr2:231605790|231606096 hsa-miR-148a-5p 0 0 1
chr2:231605790|231606096 hsa-miR-148a-3p 0 0 1
chr2:231605790|231606096 hsa-miR-34a-5p 0 0 1
chr2:231605790|231606096 hsa-miR-34a-3p 0 0 1
chr2:231605790|231606096 hsa-miR-223-5p 0 0 1
chr2:231605790|231606096 hsa-miR-223-3p 0 0 1
chr2:231605790|231606096 hsa-miR-27b-5p 0 0 1
chr2:231605790|231606096 hsa-miR-27b-3p 0 0 1
chr2:231605790|231606096 hsa-miR-152-5p 0 0 1
chr2:231605790|231606096 hsa-miR-152-3p 0 0 1
chr2:231605790|231606096 hsa-miR-185-5p 0 0 1
chr2:231605790|231606096 hsa-miR-185-3p 0 0 1
chr2:231605790|231606096 hsa-miR-376c-5p 0 0 1
chr2:231605790|231606096 hsa-miR-376c-3p 0 0 1
chr2:231605790|231606096 hsa-miR-148b-5p 0 0 1
chr2:231605790|231606096 hsa-miR-148b-3p 0 0 1
chr2:231605790|231606096 hsa-miR-449a 0 1 1
chr2:231605790|231606096 hsa-miR-484 0 0 1
chr2:231605790|231606096 hsa-miR-520f-5p 0 0 1
chr2:231605790|231606096 hsa-miR-520f-3p 0 0 1
chr2:231605790|231606096 hsa-miR-558 0 0 1
chr2:231605790|231606096 hsa-miR-625-5p 0 0 1
chr2:231605790|231606096 hsa-miR-625-3p 0 0 1
chr2:231605790|231606096 hsa-miR-636 0 0 1
chr2:231605790|231606096 hsa-miR-637 0 0 1
chr2:231605790|231606096 hsa-miR-449b-5p 0 0 1
chr2:231605790|231606096 hsa-miR-449b-3p 0 0 1
chr2:231605790|231606096 hsa-miR-874-5p 0 0 1
chr2:231605790|231606096 hsa-miR-874-3p 0 0 1
chr2:231605790|231606096 hsa-miR-943 0 1 1
chr2:231605790|231606096 hsa-miR-1205 0 0 1
chr2:231605790|231606096 hsa-miR-1267 0 0 1
chr2:231605790|231606096 hsa-miR-1275 1 0 1
chr2:231605790|231606096 hsa-miR-671-5p 1 1 1
chr2:231605790|231606096 hsa-miR-139-3p 1 0 1
chr2:231605790|231606096 hsa-miR-1224-5p 0 0 1
chr2:231605790|231606096 hsa-miR-485-5p 0 0 1
chr2:231605790|231606096 hsa-miR-146b-3p 0 0 1
chr2:231605790|231606096 hsa-miR-1184 0 0 1
chr2:231605790|231606096 hsa-miR-330-3p 0 1 1
chr2:231605790|231606096 hsa-miR-331-3p 0 0 1
chr2:231605790|231606096 hsa-miR-876-3p 0 0 1
chr2:231605790|231606096 hsa-miR-513a-5p 0 1 1
chr2:231605790|231606096 hsa-miR-34c-5p 0 0 1
chr2:231605790|231606096 hsa-miR-509-3-5p 0 1 1
chr2:231605790|231606096 hsa-miR-509-5p 0 0 1
chr2:231605790|231606096 hsa-miR-323-5p 0 0 1
chr2:231605790|231606096 hsa-miR-220c 0 0 1
chr2:231605790|231606096 hsa-miR-596 1 0 0
chr2:231605790|231606096 hsa-miR-645 1 1 0
chr2:231605790|231606096 hsa-miR-661 1 0 0
chr2:231605790|231606096 hsa-miR-762 1 1 0
chr2:231605790|231606096 hsa-miR-764 0 1 0
chr2:231605790|231606096 hsa-miR-1183 1 0 0
chr2:231605790|231606096 hsa-miR-1202 1 0 0
chr2:231605790|231606096 hsa-miR-1293 1 1 0
chr2:231605790|231606096 hsa-miR-3147 0 1 0
chr2:231605790|231606096 hsa-miR-3188 0 1 0
chr2:231605790|231606096 hsa-miR-4292 1 1 0
chr2:231605790|231606096 hsa-miR-3652 0 1 0
chr2:231605790|231606096 hsa-miR-4507 1 0 0
chr2:231605790|231606096 hsa-miR-1587 0 1 0
chr2:231605790|231606096 hsa-miR-4689 1 1 0
chr2:231605790|231606096 hsa-miR-4706 1 0 0
chr2:231605790|231606096 hsa-miR-4741 1 1 0
chr2:231605790|231606096 hsa-miR-5787 1 0 0
chr2:231605790|231606096 hsa-miR-6132 1 0 0
chr2:231605790|231606096 hsa-miR-12128 0 1 0
chr2:231605790|231606096 hsa-miR-17-3p 0 1 0
chr2:231605790|231606096 hsa-miR-6734-5p 1 0 0
chr2:231605790|231606096 hsa-miR-4726-3p 1 0 0
chr2:231605790|231606096 hsa-miR-6765-5p 1 0 0
chr2:231605790|231606096 hsa-miR-6836-3p 0 1 0
chr2:231605790|231606096 hsa-miR-4687-3p 1 1 0
chr2:231605790|231606096 hsa-miR-4708-5p 0 1 0
chr2:231605790|231606096 hsa-miR-6757-5p 0 1 0
chr2:231605790|231606096 hsa-miR-6880-5p 1 0 0
chr2:231605790|231606096 hsa-miR-3064-5p 0 1 0
chr2:231605790|231606096 hsa-miR-197-5p 1 0 0
chr2:231605790|231606096 hsa-miR-3180-3p 1 0 0
chr2:231605790|231606096 hsa-miR-4697-3p 0 1 0
chr2:231605790|231606096 hsa-miR-2467-5p 1 0 0
chr2:231605790|231606096 hsa-miR-6798-5p 1 0 0
chr2:231605790|231606096 hsa-miR-3156-5p 0 1 0
chr2:231605790|231606096 hsa-miR-1226-5p 1 0 0
chr2:231605790|231606096 hsa-miR-4786-3p 0 1 0
chr2:231605790|231606096 hsa-miR-1229-5p 1 1 0
chr2:231605790|231606096 hsa-miR-4640-5p 1 0 0
chr2:231605790|231606096 hsa-miR-4756-3p 0 1 0
chr2:231605790|231606096 hsa-miR-4783-5p 1 0 0
chr2:231605790|231606096 hsa-miR-877-5p 1 0 0
chr2:231605790|231606096 hsa-miR-6824-5p 1 0 0
chr2:231605790|231606096 hsa-miR-6742-3p 0 1 0
chr2:231605790|231606096 hsa-miR-4640-3p 0 1 0
chr2:231605790|231606096 hsa-miR-6895-5p 0 1 0
chr2:231605790|231606096 hsa-miR-1225-5p 1 0 0
chr2:231605790|231606096 hsa-miR-2114-5p 0 1 0
chr2:231605790|231606096 hsa-miR-6778-3p 0 1 0
chr2:231605790|231606096 hsa-miR-6895-3p 0 1 0
chr2:231605790|231606096 hsa-miR-6859-3p 0 1 0
chr2:231605790|231606096 hsa-miR-5007-5p 0 1 0
chr2:231605790|231606096 hsa-miR-4763-3p 1 0 0
chr2:231605790|231606096 hsa-miR-6812-5p 1 0 0
chr2:231605790|231606096 hsa-miR-1343-5p 1 0 0
chr2:231605790|231606096 hsa-miR-6756-5p 1 0 0
chr2:231605790|231606096 hsa-miR-6803-5p 1 0 0
chr2:231605790|231606096 hsa-miR-1249-5p 1 0 0
chr2:231605790|231606096 hsa-miR-6774-5p 1 1 0
chr2:231605790|231606096 hsa-miR-6797-5p 1 0 0
chr2:231605790|231606096 hsa-miR-3620-5p 0 1 0
chr2:231605790|231606096 hsa-miR-5189-5p 1 0 0
chr2:231605790|231606096 hsa-miR-4726-5p 1 1 0
chr2:231605790|231606096 hsa-miR-6777-5p 1 0 0
chr2:231605790|231606096 hsa-miR-6858-5p 1 1 0
chr2:231605790|231606096 hsa-miR-6889-5p 1 0 0
chr2:231605790|231606096 hsa-miR-34b-5p 0 1 0
chr2:231605790|231606096 hsa-miR-1271-3p 1 0 0
chr2:231605790|231606096 hsa-miR-6791-5p 1 1 0
chr2:231605790|231606096 hsa-miR-10400-3p 1 0 0
chr2:231605790|231606096 hsa-miR-10394-5p 1 0 0
chr2:231605790|231606096 hsa-miR-2682-5p 1 1 0
chr2:231605790|231606096 hsa-miR-10397-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:231605790|231606096
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MGMLCPSGPGRHLPIPVNSSVSPQQSVTAF
Nucleotide Sequence CTGGGCATGCTTTGTCCGTCTGGCCCAGGGAGGCATCTGCCCATCCCTGTGAATAGCAGCGTCTCTCCTCAACAGTCAGTGACTGCCTTCTGA
CircID chr2:231605790|231606096
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MTSKPTDYPGAWACFVRLAQGGICPSL
Nucleotide Sequence CTGACATCCAAACCAACTGACTACCCAGGAGCCTGGGCATGCTTTGTCCGTCTGGCCCAGGGAGGCATCTGCCCATCCCTGTGA
CircID chr2:231605790|231606096
ORF Type ORF3
Protein Length 56
Nucleotide Length 168
Protein Sequence MPSDSLTRGSECERHLASLKKQLQPGFQGRDSPLPDLQTLHHQGAYCSWEKPQIYV
Nucleotide Sequence CTGCCTTCTGACAGCCTGACCAGGGGGTCTGAGTGCGAGAGGCATCTGGCATCTCTGAAAAAGCAGCTCCAGCCTGGCTTCCAGGGCAGGGACTCTCCACTGCCAGATCTGCAGACTCTCCACCACCAGGGCGCCTACTGCAGTTGGGAAAAGCCTCAGATCTATGTC
CircID chr2:231605790|231606096
ORF Type ORF4
Protein Length 31
Nucleotide Length 93
Protein Sequence MASRAGTLHCQICRLSTTRAPTAVGKSLRSM
Nucleotide Sequence CTGGCTTCCAGGGCAGGGACTCTCCACTGCCAGATCTGCAGACTCTCCACCACCAGGGCGCCTACTGCAGTTGGGAAAAGCCTCAGATCTATG
CircID chr2:231605790|231606096
ORF Type ORF5
Protein Length 99
Nucleotide Length 297
Protein Sequence MRLFPTAVGALVVESLQIWQWRVPALEARLELLFQRCQMPLALRPPGQAVRRQSLTVEERRCYSQGWADASLGQTDKACPGSWVVSWFGCQCLACWAGG
Nucleotide Sequence CTGAGGCTTTTCCCAACTGCAGTAGGCGCCCTGGTGGTGGAGAGTCTGCAGATCTGGCAGTGGAGAGTCCCTGCCCTGGAAGCCAGGCTGGAGCTGCTTTTTCAGAGATGCCAGATGCCTCTCGCACTCAGACCCCCTGGTCAGGCTGTCAGAAGGCAGTCACTGACTGTTGAGGAGAGACGCTGCTATTCACAGGGATGGGCAGATGCCTCCCTGGGCCAGACGGACAAAGCATGCCCAGGCTCCTGGGTAGTCAGTTGGTTTGGATGTCAGTGCTTGGCCTGTTGGGCTGGGGGA
CircID chr2:231605790|231606096
ORF Type ORF6
Protein Length 31
Nucleotide Length 96
Protein Sequence MPWKPGWSCFFRDARCLSHSDPLVRLSEGSH
Nucleotide Sequence CTGCCCTGGAAGCCAGGCTGGAGCTGCTTTTTCAGAGATGCCAGATGCCTCTCGCACTCAGACCCCCTGGTCAGGCTGTCAGAAGGCAGTCACTGA
CircID chr2:231605790|231606096
ORF Type ORF7
Protein Length 28
Nucleotide Length 87
Protein Sequence MLRRDAAIHRDGQMPPWARRTKHAQAPG
Nucleotide Sequence CTGTTGAGGAGAGACGCTGCTATTCACAGGGATGGGCAGATGCCTCCCTGGGCCAGACGGACAAAGCATGCCCAGGCTCCTGGGTAG
CircID chr2:231605790|231606096
ORF Type ORF8
Protein Length 39
Nucleotide Length 120
Protein Sequence MAVESPCPGSQAGAAFSEMPDASRTQTPWSGCQKAVTDC
Nucleotide Sequence CTGGCAGTGGAGAGTCCCTGCCCTGGAAGCCAGGCTGGAGCTGCTTTTTCAGAGATGCCAGATGCCTCTCGCACTCAGACCCCCTGGTCAGGCTGTCAGAAGGCAGTCACTGACTGTTGA
CircID chr2:231605790|231606096
ORF Type ORF9
Protein Length 38
Nucleotide Length 114
Protein Sequence MLFTGMGRCLPGPDGQSMPRLLGSQLVWMSVLGLLGWG
Nucleotide Sequence CTGCTATTCACAGGGATGGGCAGATGCCTCCCTGGGCCAGACGGACAAAGCATGCCCAGGCTCCTGGGTAGTCAGTTGGTTTGGATGTCAGTGCTTGGCCTGTTGGGCTGGGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab