CircRNA Information

General Information
circRNA Basic Information
CircID chr2:232336701|232336827
Strand -
CircType exon
Host Gene ENSG00000144535.18;
Algorism CIRI2;
Sequence ACGGAGGGGGGTTTTTAATTTGGTTTTTAACAACTCAGGGGTTTGTTTTTATTTTTATTTAATTTTTGCAGCTCAACTTTTAAACAAACTGCAGGGGAGAGGGTGGGGCTGGAAGGAAGGCTGAGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:232336701|232336827 hsa-miR-495-5p 0 0 1
chr2:232336701|232336827 hsa-miR-495-3p 0 0 1
chr2:232336701|232336827 hsa-miR-558 0 0 1
chr2:232336701|232336827 hsa-miR-571 0 0 1
chr2:232336701|232336827 hsa-miR-548n 0 0 1
chr2:232336701|232336827 hsa-miR-331-3p 0 0 1
chr2:232336701|232336827 hsa-miR-125a-5p 0 0 1
chr2:232336701|232336827 hsa-miR-548c-3p 0 0 1
chr2:232336701|232336827 hsa-miR-548d-3p 0 0 1
chr2:232336701|232336827 hsa-miR-125b 0 0 1
chr2:232336701|232336827 hsa-miR-219-1-3p 0 0 1
chr2:232336701|232336827 hsa-miR-484 1 0 0
chr2:232336701|232336827 hsa-miR-623 1 0 0
chr2:232336701|232336827 hsa-miR-1825 1 0 0
chr2:232336701|232336827 hsa-miR-3972 1 0 0
chr2:232336701|232336827 hsa-miR-12116 1 0 0
chr2:232336701|232336827 hsa-miR-6720-5p 1 0 0
chr2:232336701|232336827 hsa-miR-766-3p 1 0 0
chr2:232336701|232336827 hsa-miR-6892-3p 1 0 0
chr2:232336701|232336827 hsa-miR-3189-5p 1 0 0
chr2:232336701|232336827 hsa-miR-6849-3p 1 0 0
chr2:232336701|232336827 hsa-miR-7110-3p 1 0 0
chr2:232336701|232336827 hsa-miR-6787-3p 1 0 0
chr2:232336701|232336827 hsa-miR-7108-3p 1 0 0
chr2:232336701|232336827 hsa-miR-1247-5p 1 0 0
chr2:232336701|232336827 hsa-miR-4667-3p 1 0 0
chr2:232336701|232336827 hsa-miR-6736-3p 1 0 0
chr2:232336701|232336827 hsa-miR-6742-3p 1 0 0
chr2:232336701|232336827 hsa-miR-6769a-3p 1 0 0
chr2:232336701|232336827 hsa-miR-4758-3p 1 0 0
chr2:232336701|232336827 hsa-miR-6793-3p 1 0 0
chr2:232336701|232336827 hsa-miR-1224-3p 1 0 0
chr2:232336701|232336827 hsa-miR-2276-5p 1 0 0
chr2:232336701|232336827 hsa-miR-4632-3p 1 0 0
chr2:232336701|232336827 hsa-miR-6865-3p 1 0 0
chr2:232336701|232336827 hsa-miR-4749-3p 1 0 0
chr2:232336701|232336827 hsa-miR-1227-3p 1 0 0
chr2:232336701|232336827 hsa-miR-4433a-5p 1 0 0
chr2:232336701|232336827 hsa-miR-4433b-5p 1 0 0
chr2:232336701|232336827 hsa-miR-6734-3p 1 0 0
chr2:232336701|232336827 hsa-miR-3162-3p 1 0 0
chr2:232336701|232336827 hsa-miR-4722-3p 1 0 0
chr2:232336701|232336827 hsa-miR-6511a-3p 1 0 0
chr2:232336701|232336827 hsa-miR-6756-3p 1 0 0
chr2:232336701|232336827 hsa-miR-6784-3p 1 0 0
chr2:232336701|232336827 hsa-miR-6862-3p 1 0 0
chr2:232336701|232336827 hsa-miR-10392-3p 1 0 0
chr2:232336701|232336827 hsa-miR-6512-3p 1 0 0
chr2:232336701|232336827 hsa-miR-7114-3p 1 0 0
chr2:232336701|232336827 hsa-miR-6744-3p 1 0 0
chr2:232336701|232336827 hsa-miR-4690-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr2:232336701|232336827
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MFLFLFNFCSSTFKQTAGERVGLEGRLR
Nucleotide Sequence TTGTTTTTATTTTTATTTAATTTTTGCAGCTCAACTTTTAAACAAACTGCAGGGGAGAGGGTGGGGCTGGAAGGAAGGCTGAGG

CircID chr2:232336701|232336827
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MVFNNSGVCFYFYLIFAAQLLNKLQGRGWGWKEG
Nucleotide Sequence TTGGTTTTTAACAACTCAGGGGTTTGTTTTTATTTTTATTTAATTTTTGCAGCTCAACTTTTAAACAAACTGCAGGGGAGAGGGTGGGGCTGGAAGGAAGGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites