CircRNA Information

General Information
circRNA Basic Information
CircID chr2:232681797|232681926
Strand -
CircType exon
Host Gene ENSG00000115468.10;
Algorism CIRI2;
Sequence TGCTGTCGGTCCCCTCCCTGAGCCAGCATCTCCATCCACCACCCCGTGCCAGCTCCCGTGCCAGCCTTCATTCCTCCCAGTGTCCAAGCCCCTCCAGGAGGGTCCTGGGGTGGGCCAGATGCCTGCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:232681797|232681926 hsa-miR-149-5p 0 0 1
chr2:232681797|232681926 hsa-miR-149-3p 0 0 1
chr2:232681797|232681926 hsa-miR-564 1 0 1
chr2:232681797|232681926 hsa-miR-608 1 1 1
chr2:232681797|232681926 hsa-miR-620 0 0 1
chr2:232681797|232681926 hsa-miR-920 0 0 1
chr2:232681797|232681926 hsa-miR-1293 1 1 1
chr2:232681797|232681926 hsa-miR-1266-5p 0 0 1
chr2:232681797|232681926 hsa-miR-1266-3p 0 0 1
chr2:232681797|232681926 hsa-miR-1270 0 0 1
chr2:232681797|232681926 hsa-miR-1321 0 1 1
chr2:232681797|232681926 hsa-miR-423-5p 0 0 1
chr2:232681797|232681926 hsa-miR-24 0 0 1
chr2:232681797|232681926 hsa-miR-612 0 1 0
chr2:232681797|232681926 hsa-miR-635 0 1 0
chr2:232681797|232681926 hsa-miR-637 1 0 0
chr2:232681797|232681926 hsa-miR-663a 1 0 0
chr2:232681797|232681926 hsa-miR-762 1 0 0
chr2:232681797|232681926 hsa-miR-765 1 0 0
chr2:232681797|232681926 hsa-miR-760 1 0 0
chr2:232681797|232681926 hsa-miR-1182 1 0 0
chr2:232681797|232681926 hsa-miR-1268a 1 0 0
chr2:232681797|232681926 hsa-miR-1538 1 0 0
chr2:232681797|232681926 hsa-miR-2861 1 0 0
chr2:232681797|232681926 hsa-miR-3132 1 0 0
chr2:232681797|232681926 hsa-miR-3147 1 0 0
chr2:232681797|232681926 hsa-miR-3165 0 1 0
chr2:232681797|232681926 hsa-miR-3185 1 0 0
chr2:232681797|232681926 hsa-miR-3196 1 0 0
chr2:232681797|232681926 hsa-miR-4300 1 1 0
chr2:232681797|232681926 hsa-miR-4322 1 0 0
chr2:232681797|232681926 hsa-miR-3936 1 0 0
chr2:232681797|232681926 hsa-miR-1268b 1 0 0
chr2:232681797|232681926 hsa-miR-4430 1 0 0
chr2:232681797|232681926 hsa-miR-4441 0 1 0
chr2:232681797|232681926 hsa-miR-3135b 1 0 0
chr2:232681797|232681926 hsa-miR-3689c 1 1 0
chr2:232681797|232681926 hsa-miR-4487 1 0 0
chr2:232681797|232681926 hsa-miR-4488 1 0 0
chr2:232681797|232681926 hsa-miR-4489 1 0 0
chr2:232681797|232681926 hsa-miR-4498 1 0 0
chr2:232681797|232681926 hsa-miR-4505 1 0 0
chr2:232681797|232681926 hsa-miR-4508 1 0 0
chr2:232681797|232681926 hsa-miR-4525 1 0 0
chr2:232681797|232681926 hsa-miR-1587 1 0 0
chr2:232681797|232681926 hsa-miR-4538 1 0 0
chr2:232681797|232681926 hsa-miR-4651 1 0 0
chr2:232681797|232681926 hsa-miR-4688 1 0 0
chr2:232681797|232681926 hsa-miR-4706 1 0 0
chr2:232681797|232681926 hsa-miR-4739 1 1 0
chr2:232681797|232681926 hsa-miR-4741 1 0 0
chr2:232681797|232681926 hsa-miR-4748 1 0 0
chr2:232681797|232681926 hsa-miR-4784 1 0 0
chr2:232681797|232681926 hsa-miR-5087 1 0 0
chr2:232681797|232681926 hsa-miR-5093 1 0 0
chr2:232681797|232681926 hsa-miR-5194 1 1 0
chr2:232681797|232681926 hsa-miR-5787 1 0 0
chr2:232681797|232681926 hsa-miR-6081 1 0 0
chr2:232681797|232681926 hsa-miR-6085 1 1 0
chr2:232681797|232681926 hsa-miR-6088 1 0 0
chr2:232681797|232681926 hsa-miR-6090 1 0 0
chr2:232681797|232681926 hsa-miR-6126 1 0 0
chr2:232681797|232681926 hsa-miR-6745 1 1 0
chr2:232681797|232681926 hsa-miR-12128 0 1 0
chr2:232681797|232681926 hsa-miR-150-3p 1 0 0
chr2:232681797|232681926 hsa-miR-4433b-3p 1 1 0
chr2:232681797|232681926 hsa-miR-6840-3p 0 1 0
chr2:232681797|232681926 hsa-miR-6747-5p 1 0 0
chr2:232681797|232681926 hsa-miR-4433a-3p 1 0 0
chr2:232681797|232681926 hsa-miR-3150a-3p 1 0 0
chr2:232681797|232681926 hsa-miR-7106-5p 1 1 0
chr2:232681797|232681926 hsa-miR-6825-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6894-5p 1 1 0
chr2:232681797|232681926 hsa-miR-6799-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6728-5p 1 0 0
chr2:232681797|232681926 hsa-miR-3692-5p 0 1 0
chr2:232681797|232681926 hsa-miR-8071 1 0 0
chr2:232681797|232681926 hsa-miR-766-5p 1 1 0
chr2:232681797|232681926 hsa-miR-3622a-5p 1 1 0
chr2:232681797|232681926 hsa-miR-5187-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6515-5p 0 1 0
chr2:232681797|232681926 hsa-miR-6089 1 0 0
chr2:232681797|232681926 hsa-miR-3192-5p 1 1 0
chr2:232681797|232681926 hsa-miR-6746-5p 1 0 0
chr2:232681797|232681926 hsa-miR-4653-3p 1 0 0
chr2:232681797|232681926 hsa-miR-6741-5p 1 0 0
chr2:232681797|232681926 hsa-miR-3622b-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6806-5p 0 1 0
chr2:232681797|232681926 hsa-miR-6721-5p 0 1 0
chr2:232681797|232681926 hsa-miR-197-5p 1 0 0
chr2:232681797|232681926 hsa-miR-8069 1 0 0
chr2:232681797|232681926 hsa-miR-432-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6716-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6871-5p 1 1 0
chr2:232681797|232681926 hsa-miR-659-3p 0 1 0
chr2:232681797|232681926 hsa-miR-185-3p 1 0 0
chr2:232681797|232681926 hsa-miR-6732-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6827-5p 1 0 0
chr2:232681797|232681926 hsa-miR-1224-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6770-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6782-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6874-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6888-5p 1 0 0
chr2:232681797|232681926 hsa-miR-30b-3p 0 1 0
chr2:232681797|232681926 hsa-miR-1226-5p 1 0 0
chr2:232681797|232681926 hsa-miR-193b-5p 1 0 0
chr2:232681797|232681926 hsa-miR-3691-5p 0 1 0
chr2:232681797|232681926 hsa-miR-5580-5p 0 1 0
chr2:232681797|232681926 hsa-miR-6771-5p 1 0 0
chr2:232681797|232681926 hsa-miR-3614-5p 1 0 0
chr2:232681797|232681926 hsa-miR-92b-5p 1 0 0
chr2:232681797|232681926 hsa-miR-3648 1 0 0
chr2:232681797|232681926 hsa-miR-4638-3p 1 0 0
chr2:232681797|232681926 hsa-miR-4446-3p 1 1 0
chr2:232681797|232681926 hsa-miR-6824-5p 1 0 0
chr2:232681797|232681926 hsa-miR-7850-5p 1 0 0
chr2:232681797|232681926 hsa-miR-660-3p 0 1 0
chr2:232681797|232681926 hsa-miR-4727-3p 1 0 0
chr2:232681797|232681926 hsa-miR-744-5p 1 0 0
chr2:232681797|232681926 hsa-miR-2277-5p 1 0 0
chr2:232681797|232681926 hsa-miR-3126-3p 0 1 0
chr2:232681797|232681926 hsa-miR-1207-5p 1 0 0
chr2:232681797|232681926 hsa-miR-1233-5p 1 0 0
chr2:232681797|232681926 hsa-miR-1273h-5p 1 1 0
chr2:232681797|232681926 hsa-miR-3689b-3p 1 1 0
chr2:232681797|232681926 hsa-miR-4763-3p 1 0 0
chr2:232681797|232681926 hsa-miR-6769b-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6778-5p 1 1 0
chr2:232681797|232681926 hsa-miR-6787-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6812-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6816-5p 1 0 0
chr2:232681797|232681926 hsa-miR-5001-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6726-5p 1 1 0
chr2:232681797|232681926 hsa-miR-6737-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6743-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6754-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6756-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6803-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6813-5p 1 1 0
chr2:232681797|232681926 hsa-miR-6819-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6851-5p 1 0 0
chr2:232681797|232681926 hsa-miR-11181-3p 1 0 0
chr2:232681797|232681926 hsa-miR-1249-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6751-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6774-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6779-5p 1 1 0
chr2:232681797|232681926 hsa-miR-6780a-5p 1 1 0
chr2:232681797|232681926 hsa-miR-6797-5p 1 0 0
chr2:232681797|232681926 hsa-miR-3620-5p 1 0 0
chr2:232681797|232681926 hsa-miR-4728-5p 1 1 0
chr2:232681797|232681926 hsa-miR-5189-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6780b-5p 1 0 0
chr2:232681797|232681926 hsa-miR-10396a-5p 1 0 0
chr2:232681797|232681926 hsa-miR-10396b-5p 1 0 0
chr2:232681797|232681926 hsa-miR-1909-3p 1 0 0
chr2:232681797|232681926 hsa-miR-328-5p 1 0 0
chr2:232681797|232681926 hsa-miR-3689a-3p 1 1 0
chr2:232681797|232681926 hsa-miR-6738-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6795-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6846-5p 1 1 0
chr2:232681797|232681926 hsa-miR-6848-5p 1 1 0
chr2:232681797|232681926 hsa-miR-6883-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6887-5p 1 0 0
chr2:232681797|232681926 hsa-miR-4697-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6885-5p 1 0 0
chr2:232681797|232681926 hsa-miR-939-5p 1 0 0
chr2:232681797|232681926 hsa-miR-4769-5p 1 0 0
chr2:232681797|232681926 hsa-miR-1914-3p 1 1 0
chr2:232681797|232681926 hsa-miR-6855-5p 1 0 0
chr2:232681797|232681926 hsa-miR-4646-5p 1 0 0
chr2:232681797|232681926 hsa-miR-6785-5p 1 1 0
chr2:232681797|232681926 hsa-miR-3184-5p 1 0 0
chr2:232681797|232681926 hsa-miR-5591-5p 1 1 0
chr2:232681797|232681926 hsa-miR-769-3p 1 0 0
chr2:232681797|232681926 hsa-miR-9851-5p 1 1 0
chr2:232681797|232681926 hsa-miR-6715b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr2:232681797|232681926
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence LSVPSLSQHLHPPPRASSRASLHSSQCPSPSRRVLGWARCLP
Nucleotide Sequence CTGTCGGTCCCCTCCCTGAGCCAGCATCTCCATCCACCACCCCGTGCCAGCTCCCGTGCCAGCCTTCATTCCTCCCAGTGTCCAAGCCCCTCCAGGAGGGTCCTGGGGTGGGCCAGATGCCTGCCC
CircID chr2:232681797|232681926
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MDTGRNEGWHGSWHGVVDGDAGSGRGPTA
Nucleotide Sequence TTGGACACTGGGAGGAATGAAGGCTGGCACGGGAGCTGGCACGGGGTGGTGGATGGAGATGCTGGCTCAGGGAGGGGACCGACAGCA
CircID chr2:232681797|232681926
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MGGMKAGTGAGTGWWMEMLAQGGDRQ
Nucleotide Sequence CTGGGAGGAATGAAGGCTGGCACGGGAGCTGGCACGGGGTGGTGGATGGAGATGCTGGCTCAGGGAGGGGACCGACAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab