CircRNA Information

General Information
circRNA Basic Information
CircID chr2:237340570|237340769
Strand -
CircType exon
Host Gene ENSG00000163359.14;
Algorism CIRI2;
Sequence CTCCTTGATGTTCACCTTCCTGCCAATGCCCAGGACCACGAAGAAGTAGCCCTTGCATTTGGCCTGCAGGATGACTCTCTGGGCCTCCTCCAGCTGCTGCTCCGGCACCTCGCCCGTCAGCATCAGGACCACAATTTTCAGGTCCCGTGGGTTTGGGGCACTTTCAAAGACATTCTCTATGGTGTATTCAATGGCACTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:237340570|237340769 hsa-miR-15a-5p 0 0 1
chr2:237340570|237340769 hsa-miR-15a-3p 0 0 1
chr2:237340570|237340769 hsa-miR-17-5p 0 0 1
chr2:237340570|237340769 hsa-miR-17-3p 0 0 1
chr2:237340570|237340769 hsa-miR-20a-5p 0 0 1
chr2:237340570|237340769 hsa-miR-20a-3p 0 0 1
chr2:237340570|237340769 hsa-miR-93-5p 0 0 1
chr2:237340570|237340769 hsa-miR-93-3p 0 0 1
chr2:237340570|237340769 hsa-miR-106a-5p 0 0 1
chr2:237340570|237340769 hsa-miR-106a-3p 0 0 1
chr2:237340570|237340769 hsa-miR-15b-5p 0 0 1
chr2:237340570|237340769 hsa-miR-15b-3p 0 0 1
chr2:237340570|237340769 hsa-miR-195-5p 0 0 1
chr2:237340570|237340769 hsa-miR-195-3p 0 0 1
chr2:237340570|237340769 hsa-miR-106b-5p 0 0 1
chr2:237340570|237340769 hsa-miR-106b-3p 0 0 1
chr2:237340570|237340769 hsa-miR-424-5p 0 0 1
chr2:237340570|237340769 hsa-miR-424-3p 0 0 1
chr2:237340570|237340769 hsa-miR-20b-5p 0 0 1
chr2:237340570|237340769 hsa-miR-20b-3p 0 0 1
chr2:237340570|237340769 hsa-miR-488-5p 0 0 1
chr2:237340570|237340769 hsa-miR-488-3p 0 0 1
chr2:237340570|237340769 hsa-miR-511-5p 0 0 1
chr2:237340570|237340769 hsa-miR-511-3p 0 0 1
chr2:237340570|237340769 hsa-miR-492 0 0 1
chr2:237340570|237340769 hsa-miR-497-5p 0 0 1
chr2:237340570|237340769 hsa-miR-497-3p 0 0 1
chr2:237340570|237340769 hsa-miR-519d-5p 0 0 1
chr2:237340570|237340769 hsa-miR-519d-3p 0 0 1
chr2:237340570|237340769 hsa-miR-612 1 0 1
chr2:237340570|237340769 hsa-miR-646 0 0 1
chr2:237340570|237340769 hsa-miR-765 0 0 1
chr2:237340570|237340769 hsa-miR-1203 0 0 1
chr2:237340570|237340769 hsa-miR-1205 0 0 1
chr2:237340570|237340769 hsa-miR-1256 0 0 1
chr2:237340570|237340769 hsa-miR-1207-3p 0 0 1
chr2:237340570|237340769 hsa-miR-628-5p 0 0 1
chr2:237340570|237340769 hsa-miR-1207-5p 1 0 1
chr2:237340570|237340769 hsa-miR-105 0 0 1
chr2:237340570|237340769 hsa-miR-16 0 0 1
chr2:237340570|237340769 hsa-miR-1285 0 0 1
chr2:237340570|237340769 hsa-miR-663a 1 0 0
chr2:237340570|237340769 hsa-miR-762 1 0 0
chr2:237340570|237340769 hsa-miR-1268a 1 0 0
chr2:237340570|237340769 hsa-miR-1321 0 1 0
chr2:237340570|237340769 hsa-miR-3141 1 0 0
chr2:237340570|237340769 hsa-miR-3147 1 0 0
chr2:237340570|237340769 hsa-miR-4253 1 0 0
chr2:237340570|237340769 hsa-miR-4281 1 0 0
chr2:237340570|237340769 hsa-miR-3649 0 1 0
chr2:237340570|237340769 hsa-miR-3945 1 0 0
chr2:237340570|237340769 hsa-miR-1268b 1 0 0
chr2:237340570|237340769 hsa-miR-3135b 1 1 0
chr2:237340570|237340769 hsa-miR-4480 0 1 0
chr2:237340570|237340769 hsa-miR-4734 1 0 0
chr2:237340570|237340769 hsa-miR-6081 0 1 0
chr2:237340570|237340769 hsa-miR-6860 1 1 0
chr2:237340570|237340769 hsa-miR-7150 0 1 0
chr2:237340570|237340769 hsa-miR-8075 1 1 0
chr2:237340570|237340769 hsa-miR-9718 1 1 0
chr2:237340570|237340769 hsa-miR-323a-5p 1 0 0
chr2:237340570|237340769 hsa-miR-6861-5p 1 0 0
chr2:237340570|237340769 hsa-miR-6825-5p 1 1 0
chr2:237340570|237340769 hsa-miR-6894-5p 1 0 0
chr2:237340570|237340769 hsa-miR-1972 0 1 0
chr2:237340570|237340769 hsa-miR-6089 1 0 0
chr2:237340570|237340769 hsa-miR-6880-5p 1 0 0
chr2:237340570|237340769 hsa-miR-4722-5p 1 0 0
chr2:237340570|237340769 hsa-miR-6762-3p 0 1 0
chr2:237340570|237340769 hsa-miR-6727-5p 1 0 0
chr2:237340570|237340769 hsa-miR-3622b-5p 1 0 0
chr2:237340570|237340769 hsa-miR-2467-3p 1 0 0
chr2:237340570|237340769 hsa-miR-6821-5p 1 0 0
chr2:237340570|237340769 hsa-miR-5006-5p 1 0 0
chr2:237340570|237340769 hsa-miR-5088-5p 1 0 0
chr2:237340570|237340769 hsa-miR-4793-5p 0 1 0
chr2:237340570|237340769 hsa-miR-4640-5p 1 0 0
chr2:237340570|237340769 hsa-miR-6749-5p 1 0 0
chr2:237340570|237340769 hsa-miR-425-3p 1 0 0
chr2:237340570|237340769 hsa-miR-6824-5p 1 0 0
chr2:237340570|237340769 hsa-miR-7152-3p 1 0 0
chr2:237340570|237340769 hsa-miR-1250-5p 1 0 0
chr2:237340570|237340769 hsa-miR-1233-5p 1 0 0
chr2:237340570|237340769 hsa-miR-4763-3p 1 0 0
chr2:237340570|237340769 hsa-miR-6778-5p 1 0 0
chr2:237340570|237340769 hsa-miR-6787-5p 1 0 0
chr2:237340570|237340769 hsa-miR-6775-5p 1 1 0
chr2:237340570|237340769 hsa-miR-5001-5p 1 0 0
chr2:237340570|237340769 hsa-miR-6726-5p 1 0 0
chr2:237340570|237340769 hsa-miR-6754-5p 1 0 0
chr2:237340570|237340769 hsa-miR-6815-5p 1 0 0
chr2:237340570|237340769 hsa-miR-6851-5p 1 0 0
chr2:237340570|237340769 hsa-miR-11181-3p 1 0 0
chr2:237340570|237340769 hsa-miR-1249-5p 1 0 0
chr2:237340570|237340769 hsa-miR-6722-3p 1 0 0
chr2:237340570|237340769 hsa-miR-6774-5p 1 0 0
chr2:237340570|237340769 hsa-miR-6779-5p 1 0 0
chr2:237340570|237340769 hsa-miR-6808-5p 0 1 0
chr2:237340570|237340769 hsa-miR-7111-5p 1 0 0
chr2:237340570|237340769 hsa-miR-5189-5p 1 1 0
chr2:237340570|237340769 hsa-miR-6780b-5p 1 0 0
chr2:237340570|237340769 hsa-miR-4632-5p 1 0 0
chr2:237340570|237340769 hsa-miR-4649-5p 1 1 0
chr2:237340570|237340769 hsa-miR-6729-5p 1 1 0
chr2:237340570|237340769 hsa-miR-6858-5p 1 0 0
chr2:237340570|237340769 hsa-miR-3187-5p 1 1 0
chr2:237340570|237340769 hsa-miR-6511b-5p 0 1 0
chr2:237340570|237340769 hsa-miR-3085-5p 1 0 0
chr2:237340570|237340769 hsa-miR-6773-5p 1 0 0
chr2:237340570|237340769 hsa-miR-6876-5p 0 1 0
chr2:237340570|237340769 hsa-miR-6891-5p 1 0 0
chr2:237340570|237340769 hsa-miR-10394-5p 0 1 0
chr2:237340570|237340769 hsa-miR-6838-5p 0 1 0
chr2:237340570|237340769 hsa-miR-6811-5p 0 1 0
chr2:237340570|237340769 hsa-miR-7853-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:237340570|237340769
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MQDDSLGLLQLLLRHLARQHQDHNFQVPWVWGTFKDILYGVFNGT
Nucleotide Sequence CTGCAGGATGACTCTCTGGGCCTCCTCCAGCTGCTGCTCCGGCACCTCGCCCGTCAGCATCAGGACCACAATTTTCAGGTCCCGTGGGTTTGGGGCACTTTCAAAGACATTCTCTATGGTGTATTCAATGGCACT
CircID chr2:237340570|237340769
ORF Type ORF2
Protein Length 49
Nucleotide Length 147
Protein Sequence MHLACRMTLWASSSCCSGTSPVSIRTTIFRSRGFGALSKTFSMVYSMAL
Nucleotide Sequence TTGCATTTGGCCTGCAGGATGACTCTCTGGGCCTCCTCCAGCTGCTGCTCCGGCACCTCGCCCGTCAGCATCAGGACCACAATTTTCAGGTCCCGTGGGTTTGGGGCACTTTCAAAGACATTCTCTATGGTGTATTCAATGGCACTG
CircID chr2:237340570|237340769
ORF Type ORF3
Protein Length 47
Nucleotide Length 141
Protein Sequence MKIVVLMLTGEVPEQQLEEAQRVILQAKCKGYFFVVLGIGRKVNIKE
Nucleotide Sequence CTGAAAATTGTGGTCCTGATGCTGACGGGCGAGGTGCCGGAGCAGCAGCTGGAGGAGGCCCAGAGAGTCATCCTGCAGGCCAAATGCAAGGGCTACTTCTTCGTGGTCCTGGGCATTGGCAGGAAGGTGAACATCAAGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab