CircRNA Information

General Information
circRNA Basic Information
CircID chr2:237974885|237975007
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGAGGTCAGGAGTTCAAGACTAGCCTGGCTAACATGGTGAAACTCTGTCTCCATTTATGGCCGGGCACAGTGGCTCACACTTGCAATCCTAGCACTTTGGGAGGCCGAGGCGGGTGGATTAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr2:237974885|237975007 hsa-miR-17-5p 0 0 1
chr2:237974885|237975007 hsa-miR-17-3p 0 0 1
chr2:237974885|237975007 hsa-miR-20a-5p 0 0 1
chr2:237974885|237975007 hsa-miR-20a-3p 0 0 1
chr2:237974885|237975007 hsa-miR-93-5p 0 0 1
chr2:237974885|237975007 hsa-miR-93-3p 0 0 1
chr2:237974885|237975007 hsa-miR-106a-5p 0 0 1
chr2:237974885|237975007 hsa-miR-106a-3p 0 0 1
chr2:237974885|237975007 hsa-miR-197-5p 0 0 1
chr2:237974885|237975007 hsa-miR-197-3p 0 0 1
chr2:237974885|237975007 hsa-miR-150-5p 0 0 1
chr2:237974885|237975007 hsa-miR-150-3p 0 0 1
chr2:237974885|237975007 hsa-miR-106b-5p 0 0 1
chr2:237974885|237975007 hsa-miR-106b-3p 0 0 1
chr2:237974885|237975007 hsa-miR-302a-5p 0 0 1
chr2:237974885|237975007 hsa-miR-302a-3p 0 0 1
chr2:237974885|237975007 hsa-miR-302b-5p 0 0 1
chr2:237974885|237975007 hsa-miR-302b-3p 0 0 1
chr2:237974885|237975007 hsa-miR-302c-5p 0 0 1
chr2:237974885|237975007 hsa-miR-302c-3p 0 0 1
chr2:237974885|237975007 hsa-miR-302d-5p 0 0 1
chr2:237974885|237975007 hsa-miR-302d-3p 0 0 1
chr2:237974885|237975007 hsa-miR-372-5p 0 0 1
chr2:237974885|237975007 hsa-miR-372-3p 0 0 1
chr2:237974885|237975007 hsa-miR-373-5p 0 0 1
chr2:237974885|237975007 hsa-miR-373-3p 0 0 1
chr2:237974885|237975007 hsa-miR-20b-5p 0 0 1
chr2:237974885|237975007 hsa-miR-20b-3p 0 0 1
chr2:237974885|237975007 hsa-miR-520e-5p 0 0 1
chr2:237974885|237975007 hsa-miR-520e-3p 0 0 1
chr2:237974885|237975007 hsa-miR-520b-5p 0 0 1
chr2:237974885|237975007 hsa-miR-520b-3p 0 0 1
chr2:237974885|237975007 hsa-miR-519d-5p 0 0 1
chr2:237974885|237975007 hsa-miR-519d-3p 0 0 1
chr2:237974885|237975007 hsa-miR-520g-5p 0 0 1
chr2:237974885|237975007 hsa-miR-520g-3p 0 0 1
chr2:237974885|237975007 hsa-miR-520h 0 0 1
chr2:237974885|237975007 hsa-miR-522-5p 0 0 1
chr2:237974885|237975007 hsa-miR-522-3p 0 0 1
chr2:237974885|237975007 hsa-miR-575 0 0 1
chr2:237974885|237975007 hsa-miR-595 0 1 1
chr2:237974885|237975007 hsa-miR-1234-3p 0 0 1
chr2:237974885|237975007 hsa-miR-302e 0 0 1
chr2:237974885|237975007 hsa-miR-1234 0 0 1
chr2:237974885|237975007 hsa-miR-520d-3p 0 0 1
chr2:237974885|237975007 hsa-miR-520a-3p 0 0 1
chr2:237974885|237975007 hsa-miR-520c-3p 0 0 1
chr2:237974885|237975007 hsa-miR-638 1 0 0
chr2:237974885|237975007 hsa-miR-1470 1 0 0
chr2:237974885|237975007 hsa-miR-718 1 0 0
chr2:237974885|237975007 hsa-miR-3159 1 1 0
chr2:237974885|237975007 hsa-miR-4252 0 1 0
chr2:237974885|237975007 hsa-miR-8086 0 1 0
chr2:237974885|237975007 hsa-miR-4665-3p 1 0 0
chr2:237974885|237975007 hsa-miR-6765-3p 1 0 0
chr2:237974885|237975007 hsa-miR-6810-5p 1 1 0
chr2:237974885|237975007 hsa-miR-7108-3p 1 0 0
chr2:237974885|237975007 hsa-miR-378a-5p 0 1 0
chr2:237974885|237975007 hsa-miR-1914-5p 0 1 0
chr2:237974885|237975007 hsa-miR-6777-3p 1 0 0
chr2:237974885|237975007 hsa-miR-6729-3p 1 0 0
chr2:237974885|237975007 hsa-miR-1271-3p 1 0 0
chr2:237974885|237975007 hsa-miR-4757-5p 1 0 0
chr2:237974885|237975007 hsa-miR-619-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr2:237974885|237975007
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MANMVKLCLHLWPGTVAHTCNPSTLGGRGGWI
Nucleotide Sequence CTGGCTAACATGGTGAAACTCTGTCTCCATTTATGGCCGGGCACAGTGGCTCACACTTGCAATCCTAGCACTTTGGGAGGCCGAGGCGGGTGGATT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab